Experiment: C.elegans, mixed culture-2
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS02100 and ABZR87_RS02105 are separated by 4 nucleotides ABZR87_RS02105 and ABZR87_RS02110 are separated by 204 nucleotides ABZR87_RS02110 and ABZR87_RS02115 are separated by 16 nucleotides
ABZR87_RS02100: ABZR87_RS02100 - 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase PaaG, at 452,512 to 453,300
_RS02100
ABZR87_RS02105: ABZR87_RS02105 - hydroxyphenylacetyl-CoA thioesterase PaaI, at 453,305 to 453,772
_RS02105
ABZR87_RS02110: ABZR87_RS02110 - phenylacetate--CoA ligase PaaK, at 453,977 to 455,281
_RS02110
ABZR87_RS02115: ABZR87_RS02115 - murein transglycosylase A, at 455,298 to 456,452
_RS02115
Position (kb) 453
454
455
456 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 453.241 kb on + strand at 453.278 kb on + strand at 453.278 kb on + strand at 453.298 kb on + strand at 453.298 kb on + strand at 453.298 kb on + strand at 453.298 kb on + strand at 453.299 kb on - strand at 453.299 kb on - strand at 453.299 kb on - strand at 453.299 kb on - strand at 453.431 kb on + strand, within ABZR87_RS02105 at 453.432 kb on - strand, within ABZR87_RS02105 at 453.432 kb on - strand, within ABZR87_RS02105 at 453.548 kb on - strand, within ABZR87_RS02105 at 453.662 kb on + strand, within ABZR87_RS02105 at 453.662 kb on + strand, within ABZR87_RS02105 at 453.662 kb on + strand, within ABZR87_RS02105 at 453.662 kb on + strand, within ABZR87_RS02105 at 453.662 kb on + strand, within ABZR87_RS02105 at 453.662 kb on + strand, within ABZR87_RS02105 at 453.663 kb on - strand, within ABZR87_RS02105 at 453.663 kb on - strand, within ABZR87_RS02105 at 453.663 kb on - strand, within ABZR87_RS02105 at 453.663 kb on - strand, within ABZR87_RS02105 at 453.663 kb on - strand, within ABZR87_RS02105 at 453.663 kb on - strand, within ABZR87_RS02105 at 453.663 kb on - strand, within ABZR87_RS02105 at 453.663 kb on - strand, within ABZR87_RS02105 at 453.669 kb on + strand, within ABZR87_RS02105 at 453.669 kb on + strand, within ABZR87_RS02105 at 453.669 kb on + strand, within ABZR87_RS02105 at 453.669 kb on + strand, within ABZR87_RS02105 at 453.669 kb on + strand, within ABZR87_RS02105 at 453.669 kb on + strand, within ABZR87_RS02105 at 453.670 kb on - strand, within ABZR87_RS02105 at 453.681 kb on - strand, within ABZR87_RS02105 at 453.771 kb on - strand at 453.785 kb on - strand at 453.785 kb on - strand at 453.785 kb on - strand at 453.786 kb on + strand at 453.786 kb on + strand at 453.786 kb on + strand at 453.786 kb on + strand at 453.786 kb on + strand at 453.786 kb on + strand at 453.786 kb on + strand at 453.786 kb on + strand at 453.786 kb on + strand at 453.786 kb on + strand at 453.786 kb on + strand at 453.786 kb on + strand at 453.786 kb on + strand at 453.787 kb on - strand at 453.787 kb on - strand at 453.787 kb on - strand at 453.787 kb on - strand at 453.787 kb on - strand at 453.787 kb on - strand at 453.816 kb on + strand at 453.816 kb on + strand at 453.817 kb on - strand at 453.817 kb on - strand at 453.886 kb on + strand at 453.886 kb on + strand at 453.886 kb on + strand at 453.886 kb on + strand at 453.886 kb on + strand at 453.886 kb on + strand at 453.886 kb on + strand at 453.886 kb on + strand at 453.886 kb on + strand at 453.886 kb on + strand at 453.886 kb on + strand at 453.886 kb on + strand at 453.886 kb on + strand at 453.886 kb on + strand at 453.886 kb on + strand at 453.886 kb on + strand at 453.886 kb on + strand at 453.886 kb on + strand at 453.886 kb on + strand at 453.887 kb on - strand at 453.887 kb on - strand at 453.887 kb on - strand at 453.887 kb on - strand at 453.887 kb on - strand at 453.887 kb on - strand at 453.887 kb on - strand at 453.887 kb on - strand at 453.887 kb on - strand at 453.887 kb on - strand at 453.887 kb on - strand at 453.887 kb on - strand at 453.887 kb on - strand at 453.887 kb on - strand at 453.887 kb on - strand at 453.887 kb on - strand at 453.887 kb on - strand at 453.887 kb on - strand at 453.894 kb on + strand at 453.895 kb on - strand at 453.932 kb on + strand at 453.932 kb on + strand at 454.085 kb on + strand at 454.085 kb on + strand at 454.085 kb on + strand at 454.085 kb on + strand at 454.085 kb on + strand at 454.085 kb on + strand at 454.085 kb on + strand at 454.086 kb on - strand at 454.086 kb on - strand at 454.086 kb on - strand at 454.086 kb on - strand at 454.086 kb on - strand at 454.208 kb on + strand, within ABZR87_RS02110 at 454.208 kb on + strand, within ABZR87_RS02110 at 454.208 kb on + strand, within ABZR87_RS02110 at 454.208 kb on + strand, within ABZR87_RS02110 at 454.208 kb on + strand, within ABZR87_RS02110 at 454.209 kb on - strand, within ABZR87_RS02110 at 454.209 kb on - strand, within ABZR87_RS02110 at 454.209 kb on - strand, within ABZR87_RS02110 at 454.209 kb on - strand, within ABZR87_RS02110 at 454.209 kb on - strand, within ABZR87_RS02110 at 454.299 kb on - strand, within ABZR87_RS02110 at 454.318 kb on + strand, within ABZR87_RS02110 at 454.318 kb on + strand, within ABZR87_RS02110 at 454.318 kb on + strand, within ABZR87_RS02110 at 454.318 kb on + strand, within ABZR87_RS02110 at 454.318 kb on + strand, within ABZR87_RS02110 at 454.318 kb on + strand, within ABZR87_RS02110 at 454.318 kb on + strand, within ABZR87_RS02110 at 454.318 kb on + strand, within ABZR87_RS02110 at 454.318 kb on + strand, within ABZR87_RS02110 at 454.318 kb on + strand, within ABZR87_RS02110 at 454.319 kb on - strand, within ABZR87_RS02110 at 454.319 kb on - strand, within ABZR87_RS02110 at 454.319 kb on - strand, within ABZR87_RS02110 at 454.319 kb on - strand, within ABZR87_RS02110 at 454.319 kb on - strand, within ABZR87_RS02110 at 454.319 kb on - strand, within ABZR87_RS02110 at 454.319 kb on - strand, within ABZR87_RS02110 at 454.391 kb on + strand, within ABZR87_RS02110 at 454.392 kb on - strand, within ABZR87_RS02110 at 454.392 kb on - strand, within ABZR87_RS02110 at 454.397 kb on + strand, within ABZR87_RS02110 at 454.398 kb on - strand, within ABZR87_RS02110 at 454.544 kb on + strand, within ABZR87_RS02110 at 454.544 kb on + strand, within ABZR87_RS02110 at 454.544 kb on + strand, within ABZR87_RS02110 at 454.544 kb on + strand, within ABZR87_RS02110 at 454.544 kb on + strand, within ABZR87_RS02110 at 454.544 kb on + strand, within ABZR87_RS02110 at 454.544 kb on + strand, within ABZR87_RS02110 at 454.544 kb on + strand, within ABZR87_RS02110 at 454.544 kb on + strand, within ABZR87_RS02110 at 454.545 kb on - strand, within ABZR87_RS02110 at 454.545 kb on - strand, within ABZR87_RS02110 at 454.545 kb on - strand, within ABZR87_RS02110 at 454.545 kb on - strand, within ABZR87_RS02110 at 454.545 kb on - strand, within ABZR87_RS02110 at 454.545 kb on - strand, within ABZR87_RS02110 at 454.545 kb on - strand, within ABZR87_RS02110 at 454.545 kb on - strand, within ABZR87_RS02110 at 454.545 kb on - strand, within ABZR87_RS02110 at 454.545 kb on - strand, within ABZR87_RS02110 at 454.690 kb on + strand, within ABZR87_RS02110 at 454.690 kb on + strand, within ABZR87_RS02110 at 454.691 kb on - strand, within ABZR87_RS02110 at 454.691 kb on - strand, within ABZR87_RS02110 at 454.691 kb on - strand, within ABZR87_RS02110 at 454.691 kb on - strand, within ABZR87_RS02110 at 454.691 kb on - strand, within ABZR87_RS02110 at 454.694 kb on + strand, within ABZR87_RS02110 at 454.694 kb on + strand, within ABZR87_RS02110 at 454.695 kb on - strand, within ABZR87_RS02110 at 454.695 kb on - strand, within ABZR87_RS02110 at 454.695 kb on - strand, within ABZR87_RS02110 at 454.695 kb on - strand, within ABZR87_RS02110 at 454.695 kb on - strand, within ABZR87_RS02110 at 454.781 kb on + strand, within ABZR87_RS02110 at 454.781 kb on + strand, within ABZR87_RS02110 at 454.781 kb on + strand, within ABZR87_RS02110 at 454.782 kb on - strand, within ABZR87_RS02110 at 455.057 kb on + strand, within ABZR87_RS02110 at 455.058 kb on - strand, within ABZR87_RS02110 at 455.058 kb on - strand, within ABZR87_RS02110 at 455.092 kb on + strand, within ABZR87_RS02110 at 455.092 kb on + strand, within ABZR87_RS02110 at 455.093 kb on - strand, within ABZR87_RS02110 at 455.093 kb on - strand, within ABZR87_RS02110 at 455.279 kb on + strand at 455.407 kb on + strand at 455.407 kb on + strand at 455.407 kb on + strand at 455.407 kb on + strand at 455.407 kb on + strand at 455.407 kb on + strand at 455.407 kb on + strand at 455.408 kb on - strand at 455.408 kb on - strand at 455.408 kb on - strand at 455.408 kb on - strand at 455.408 kb on - strand at 455.408 kb on - strand at 455.410 kb on + strand at 455.410 kb on + strand at 455.411 kb on - strand at 455.533 kb on + strand, within ABZR87_RS02115 at 455.533 kb on + strand, within ABZR87_RS02115 at 455.533 kb on + strand, within ABZR87_RS02115 at 455.533 kb on + strand, within ABZR87_RS02115 at 455.533 kb on + strand, within ABZR87_RS02115 at 455.533 kb on + strand, within ABZR87_RS02115 at 455.533 kb on + strand, within ABZR87_RS02115 at 455.534 kb on - strand, within ABZR87_RS02115 at 455.534 kb on - strand, within ABZR87_RS02115 at 455.534 kb on - strand, within ABZR87_RS02115 at 455.534 kb on - strand, within ABZR87_RS02115 at 455.632 kb on + strand, within ABZR87_RS02115 at 455.632 kb on + strand, within ABZR87_RS02115 at 455.633 kb on - strand, within ABZR87_RS02115 at 455.633 kb on - strand, within ABZR87_RS02115 at 455.724 kb on - strand, within ABZR87_RS02115 at 455.968 kb on + strand, within ABZR87_RS02115 at 455.968 kb on + strand, within ABZR87_RS02115 at 455.984 kb on - strand, within ABZR87_RS02115 at 455.984 kb on - strand, within ABZR87_RS02115 at 455.984 kb on - strand, within ABZR87_RS02115 at 455.984 kb on - strand, within ABZR87_RS02115 at 456.025 kb on + strand, within ABZR87_RS02115 at 456.025 kb on + strand, within ABZR87_RS02115 at 456.025 kb on + strand, within ABZR87_RS02115 at 456.025 kb on + strand, within ABZR87_RS02115 at 456.025 kb on + strand, within ABZR87_RS02115 at 456.025 kb on + strand, within ABZR87_RS02115 at 456.026 kb on - strand, within ABZR87_RS02115 at 456.026 kb on - strand, within ABZR87_RS02115 at 456.026 kb on - strand, within ABZR87_RS02115 at 456.026 kb on - strand, within ABZR87_RS02115 at 456.026 kb on - strand, within ABZR87_RS02115 at 456.029 kb on - strand, within ABZR87_RS02115 at 456.029 kb on - strand, within ABZR87_RS02115 at 456.260 kb on + strand, within ABZR87_RS02115 at 456.261 kb on - strand, within ABZR87_RS02115
Per-strain Table
Position Strand Gene LocusTag Fraction C.elegans, mixed culture-2 remove 453,241 + -0.4 453,278 + +0.2 453,278 + -1.4 453,298 + -0.6 453,298 + +0.5 453,298 + +0.5 453,298 + -0.8 453,299 - -1.4 453,299 - -0.3 453,299 - -0.0 453,299 - +0.9 453,431 + ABZR87_RS02105 0.27 +0.8 453,432 - ABZR87_RS02105 0.27 -1.1 453,432 - ABZR87_RS02105 0.27 +0.2 453,548 - ABZR87_RS02105 0.52 +0.8 453,662 + ABZR87_RS02105 0.76 +0.3 453,662 + ABZR87_RS02105 0.76 -0.0 453,662 + ABZR87_RS02105 0.76 -0.8 453,662 + ABZR87_RS02105 0.76 -0.5 453,662 + ABZR87_RS02105 0.76 -0.5 453,662 + ABZR87_RS02105 0.76 -0.5 453,663 - ABZR87_RS02105 0.76 -0.1 453,663 - ABZR87_RS02105 0.76 -0.4 453,663 - ABZR87_RS02105 0.76 -0.2 453,663 - ABZR87_RS02105 0.76 +0.2 453,663 - ABZR87_RS02105 0.76 -0.8 453,663 - ABZR87_RS02105 0.76 -0.4 453,663 - ABZR87_RS02105 0.76 +0.2 453,663 - ABZR87_RS02105 0.76 -0.3 453,669 + ABZR87_RS02105 0.78 -0.9 453,669 + ABZR87_RS02105 0.78 +0.7 453,669 + ABZR87_RS02105 0.78 +1.6 453,669 + ABZR87_RS02105 0.78 +0.2 453,669 + ABZR87_RS02105 0.78 -0.4 453,669 + ABZR87_RS02105 0.78 +0.1 453,670 - ABZR87_RS02105 0.78 -0.1 453,681 - ABZR87_RS02105 0.80 +0.5 453,771 - +0.8 453,785 - +1.4 453,785 - -0.3 453,785 - +0.3 453,786 + -1.0 453,786 + -0.1 453,786 + -0.4 453,786 + -0.3 453,786 + -2.1 453,786 + +0.8 453,786 + -0.4 453,786 + -0.3 453,786 + -0.0 453,786 + -0.9 453,786 + -0.4 453,786 + -0.3 453,786 + +0.8 453,787 - +0.4 453,787 - +1.0 453,787 - -1.3 453,787 - -1.8 453,787 - +0.6 453,787 - -0.8 453,816 + -1.0 453,816 + -1.0 453,817 - +0.6 453,817 - -0.1 453,886 + -0.1 453,886 + +0.3 453,886 + -0.4 453,886 + +3.4 453,886 + +0.5 453,886 + -0.7 453,886 + -0.6 453,886 + +0.4 453,886 + -0.0 453,886 + +0.4 453,886 + +0.1 453,886 + -1.1 453,886 + +0.0 453,886 + +0.4 453,886 + +0.2 453,886 + -0.3 453,886 + -0.8 453,886 + +0.1 453,886 + +0.4 453,887 - +0.3 453,887 - +0.1 453,887 - +0.5 453,887 - +0.8 453,887 - -0.3 453,887 - +0.5 453,887 - -0.5 453,887 - -3.2 453,887 - +0.7 453,887 - -0.5 453,887 - +1.2 453,887 - +0.1 453,887 - -0.1 453,887 - +0.1 453,887 - +1.0 453,887 - +0.5 453,887 - -0.1 453,887 - +0.1 453,894 + -2.1 453,895 - +0.4 453,932 + +0.8 453,932 + -0.2 454,085 + +0.1 454,085 + -0.8 454,085 + -0.1 454,085 + -0.3 454,085 + +0.3 454,085 + +0.7 454,085 + +0.2 454,086 - -0.2 454,086 - -0.2 454,086 - -0.8 454,086 - +0.2 454,086 - +0.1 454,208 + ABZR87_RS02110 0.18 -0.2 454,208 + ABZR87_RS02110 0.18 -0.7 454,208 + ABZR87_RS02110 0.18 +0.4 454,208 + ABZR87_RS02110 0.18 -1.2 454,208 + ABZR87_RS02110 0.18 -0.8 454,209 - ABZR87_RS02110 0.18 -0.2 454,209 - ABZR87_RS02110 0.18 +0.3 454,209 - ABZR87_RS02110 0.18 +0.3 454,209 - ABZR87_RS02110 0.18 -1.0 454,209 - ABZR87_RS02110 0.18 -1.1 454,299 - ABZR87_RS02110 0.25 -0.1 454,318 + ABZR87_RS02110 0.26 +1.0 454,318 + ABZR87_RS02110 0.26 -0.6 454,318 + ABZR87_RS02110 0.26 +0.0 454,318 + ABZR87_RS02110 0.26 -0.3 454,318 + ABZR87_RS02110 0.26 +0.7 454,318 + ABZR87_RS02110 0.26 +0.3 454,318 + ABZR87_RS02110 0.26 +0.4 454,318 + ABZR87_RS02110 0.26 -0.8 454,318 + ABZR87_RS02110 0.26 +0.5 454,318 + ABZR87_RS02110 0.26 -2.1 454,319 - ABZR87_RS02110 0.26 -0.4 454,319 - ABZR87_RS02110 0.26 +0.0 454,319 - ABZR87_RS02110 0.26 -0.2 454,319 - ABZR87_RS02110 0.26 -0.6 454,319 - ABZR87_RS02110 0.26 -0.8 454,319 - ABZR87_RS02110 0.26 -0.6 454,319 - ABZR87_RS02110 0.26 +1.2 454,391 + ABZR87_RS02110 0.32 -0.6 454,392 - ABZR87_RS02110 0.32 +0.5 454,392 - ABZR87_RS02110 0.32 +1.0 454,397 + ABZR87_RS02110 0.32 -0.2 454,398 - ABZR87_RS02110 0.32 -0.4 454,544 + ABZR87_RS02110 0.43 +0.5 454,544 + ABZR87_RS02110 0.43 -0.2 454,544 + ABZR87_RS02110 0.43 +0.1 454,544 + ABZR87_RS02110 0.43 -0.8 454,544 + ABZR87_RS02110 0.43 +0.4 454,544 + ABZR87_RS02110 0.43 +0.4 454,544 + ABZR87_RS02110 0.43 -0.4 454,544 + ABZR87_RS02110 0.43 -0.1 454,544 + ABZR87_RS02110 0.43 -0.5 454,545 - ABZR87_RS02110 0.44 -0.1 454,545 - ABZR87_RS02110 0.44 +0.1 454,545 - ABZR87_RS02110 0.44 -0.1 454,545 - ABZR87_RS02110 0.44 +0.5 454,545 - ABZR87_RS02110 0.44 -1.6 454,545 - ABZR87_RS02110 0.44 -0.7 454,545 - ABZR87_RS02110 0.44 +1.1 454,545 - ABZR87_RS02110 0.44 -0.1 454,545 - ABZR87_RS02110 0.44 -0.9 454,545 - ABZR87_RS02110 0.44 +0.2 454,690 + ABZR87_RS02110 0.55 +0.2 454,690 + ABZR87_RS02110 0.55 +0.2 454,691 - ABZR87_RS02110 0.55 -0.1 454,691 - ABZR87_RS02110 0.55 +0.3 454,691 - ABZR87_RS02110 0.55 +0.0 454,691 - ABZR87_RS02110 0.55 -0.0 454,691 - ABZR87_RS02110 0.55 -0.1 454,694 + ABZR87_RS02110 0.55 -1.2 454,694 + ABZR87_RS02110 0.55 +0.0 454,695 - ABZR87_RS02110 0.55 +1.0 454,695 - ABZR87_RS02110 0.55 +0.9 454,695 - ABZR87_RS02110 0.55 +1.8 454,695 - ABZR87_RS02110 0.55 -1.1 454,695 - ABZR87_RS02110 0.55 +0.1 454,781 + ABZR87_RS02110 0.62 -0.2 454,781 + ABZR87_RS02110 0.62 -1.8 454,781 + ABZR87_RS02110 0.62 +0.3 454,782 - ABZR87_RS02110 0.62 -0.8 455,057 + ABZR87_RS02110 0.83 -0.3 455,058 - ABZR87_RS02110 0.83 +0.2 455,058 - ABZR87_RS02110 0.83 +2.4 455,092 + ABZR87_RS02110 0.85 -1.2 455,092 + ABZR87_RS02110 0.85 +0.3 455,093 - ABZR87_RS02110 0.86 +0.1 455,093 - ABZR87_RS02110 0.86 -1.0 455,279 + +1.2 455,407 + +1.2 455,407 + +0.6 455,407 + +0.5 455,407 + +0.6 455,407 + +0.7 455,407 + -0.5 455,407 + +0.5 455,408 - +0.4 455,408 - +0.7 455,408 - +1.2 455,408 - +0.7 455,408 - +0.5 455,408 - +0.0 455,410 + +0.5 455,410 + +0.4 455,411 - +0.3 455,533 + ABZR87_RS02115 0.20 +1.2 455,533 + ABZR87_RS02115 0.20 +0.4 455,533 + ABZR87_RS02115 0.20 -0.2 455,533 + ABZR87_RS02115 0.20 -0.9 455,533 + ABZR87_RS02115 0.20 +1.0 455,533 + ABZR87_RS02115 0.20 +0.5 455,533 + ABZR87_RS02115 0.20 +0.6 455,534 - ABZR87_RS02115 0.20 +0.9 455,534 - ABZR87_RS02115 0.20 +0.5 455,534 - ABZR87_RS02115 0.20 +0.5 455,534 - ABZR87_RS02115 0.20 +0.9 455,632 + ABZR87_RS02115 0.29 +1.2 455,632 + ABZR87_RS02115 0.29 +1.0 455,633 - ABZR87_RS02115 0.29 -1.7 455,633 - ABZR87_RS02115 0.29 +1.2 455,724 - ABZR87_RS02115 0.37 +0.4 455,968 + ABZR87_RS02115 0.58 -0.1 455,968 + ABZR87_RS02115 0.58 +0.0 455,984 - ABZR87_RS02115 0.59 +0.1 455,984 - ABZR87_RS02115 0.59 -0.0 455,984 - ABZR87_RS02115 0.59 +1.6 455,984 - ABZR87_RS02115 0.59 +0.4 456,025 + ABZR87_RS02115 0.63 +1.2 456,025 + ABZR87_RS02115 0.63 -0.7 456,025 + ABZR87_RS02115 0.63 +0.8 456,025 + ABZR87_RS02115 0.63 +0.2 456,025 + ABZR87_RS02115 0.63 -0.5 456,025 + ABZR87_RS02115 0.63 +0.5 456,026 - ABZR87_RS02115 0.63 +0.5 456,026 - ABZR87_RS02115 0.63 +0.5 456,026 - ABZR87_RS02115 0.63 +0.7 456,026 - ABZR87_RS02115 0.63 -0.1 456,026 - ABZR87_RS02115 0.63 -3.0 456,029 - ABZR87_RS02115 0.63 +0.4 456,029 - ABZR87_RS02115 0.63 +1.3 456,260 + ABZR87_RS02115 0.83 -0.2 456,261 - ABZR87_RS02115 0.83 -2.4
Or see this region's nucleotide sequence