Experiment: C.elegans, mixed culture-2
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS01365 and ABZR87_RS01370 are separated by 19 nucleotides ABZR87_RS01370 and ABZR87_RS01375 are separated by 7 nucleotides
ABZR87_RS01365: ABZR87_RS01365 - class I SAM-dependent methyltransferase PhcB, at 284,851 to 286,263
_RS01365
ABZR87_RS01370: ABZR87_RS01370 - ATP-binding protein, at 286,283 to 287,611
_RS01370
ABZR87_RS01375: ABZR87_RS01375 - two-component system hybrid sensor histidine kinase/response regulator PhcR, at 287,619 to 288,725
_RS01375
Position (kb) 286
287
288 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 285.376 kb on + strand, within ABZR87_RS01365 at 285.376 kb on + strand, within ABZR87_RS01365 at 285.376 kb on + strand, within ABZR87_RS01365 at 285.377 kb on - strand, within ABZR87_RS01365 at 285.377 kb on - strand, within ABZR87_RS01365 at 285.377 kb on - strand, within ABZR87_RS01365 at 285.377 kb on - strand, within ABZR87_RS01365 at 285.377 kb on - strand, within ABZR87_RS01365 at 285.377 kb on - strand, within ABZR87_RS01365 at 285.490 kb on + strand, within ABZR87_RS01365 at 285.490 kb on + strand, within ABZR87_RS01365 at 285.490 kb on + strand, within ABZR87_RS01365 at 285.490 kb on + strand, within ABZR87_RS01365 at 285.491 kb on - strand, within ABZR87_RS01365 at 285.491 kb on - strand, within ABZR87_RS01365 at 285.491 kb on - strand, within ABZR87_RS01365 at 285.499 kb on + strand, within ABZR87_RS01365 at 285.499 kb on + strand, within ABZR87_RS01365 at 285.500 kb on - strand, within ABZR87_RS01365 at 285.500 kb on - strand, within ABZR87_RS01365 at 285.500 kb on - strand, within ABZR87_RS01365 at 285.500 kb on - strand, within ABZR87_RS01365 at 285.500 kb on - strand, within ABZR87_RS01365 at 285.500 kb on - strand, within ABZR87_RS01365 at 285.517 kb on + strand, within ABZR87_RS01365 at 285.529 kb on + strand, within ABZR87_RS01365 at 285.530 kb on - strand, within ABZR87_RS01365 at 285.580 kb on + strand, within ABZR87_RS01365 at 285.580 kb on + strand, within ABZR87_RS01365 at 285.580 kb on + strand, within ABZR87_RS01365 at 285.580 kb on + strand, within ABZR87_RS01365 at 285.581 kb on - strand, within ABZR87_RS01365 at 285.581 kb on - strand, within ABZR87_RS01365 at 285.661 kb on + strand, within ABZR87_RS01365 at 285.661 kb on + strand, within ABZR87_RS01365 at 285.662 kb on - strand, within ABZR87_RS01365 at 285.662 kb on - strand, within ABZR87_RS01365 at 285.662 kb on - strand, within ABZR87_RS01365 at 285.826 kb on + strand, within ABZR87_RS01365 at 285.826 kb on + strand, within ABZR87_RS01365 at 285.826 kb on + strand, within ABZR87_RS01365 at 285.826 kb on + strand, within ABZR87_RS01365 at 285.827 kb on - strand, within ABZR87_RS01365 at 285.967 kb on + strand, within ABZR87_RS01365 at 285.967 kb on + strand, within ABZR87_RS01365 at 285.968 kb on - strand, within ABZR87_RS01365 at 285.968 kb on - strand, within ABZR87_RS01365 at 285.968 kb on - strand, within ABZR87_RS01365 at 285.968 kb on - strand, within ABZR87_RS01365 at 285.988 kb on + strand, within ABZR87_RS01365 at 285.988 kb on + strand, within ABZR87_RS01365 at 285.989 kb on - strand, within ABZR87_RS01365 at 285.989 kb on - strand, within ABZR87_RS01365 at 285.989 kb on - strand, within ABZR87_RS01365 at 286.025 kb on - strand, within ABZR87_RS01365 at 286.123 kb on + strand at 286.123 kb on + strand at 286.124 kb on - strand at 286.124 kb on - strand at 286.192 kb on + strand at 286.194 kb on + strand at 286.217 kb on + strand at 286.217 kb on + strand at 286.217 kb on + strand at 286.218 kb on - strand at 286.261 kb on + strand at 286.294 kb on + strand at 286.294 kb on + strand at 286.295 kb on - strand at 286.401 kb on - strand at 286.409 kb on + strand at 286.409 kb on + strand at 286.409 kb on + strand at 286.409 kb on + strand at 286.409 kb on + strand at 286.409 kb on + strand at 286.410 kb on - strand at 286.410 kb on - strand at 286.410 kb on - strand at 286.410 kb on - strand at 286.410 kb on - strand at 286.410 kb on - strand at 286.410 kb on - strand at 286.410 kb on - strand at 286.410 kb on - strand at 286.487 kb on + strand, within ABZR87_RS01370 at 286.488 kb on - strand, within ABZR87_RS01370 at 286.488 kb on - strand, within ABZR87_RS01370 at 286.488 kb on - strand, within ABZR87_RS01370 at 286.571 kb on + strand, within ABZR87_RS01370 at 286.571 kb on + strand, within ABZR87_RS01370 at 286.572 kb on - strand, within ABZR87_RS01370 at 286.572 kb on - strand, within ABZR87_RS01370 at 286.572 kb on - strand, within ABZR87_RS01370 at 286.572 kb on - strand, within ABZR87_RS01370 at 286.598 kb on + strand, within ABZR87_RS01370 at 286.598 kb on + strand, within ABZR87_RS01370 at 286.598 kb on + strand, within ABZR87_RS01370 at 286.598 kb on + strand, within ABZR87_RS01370 at 286.599 kb on - strand, within ABZR87_RS01370 at 286.599 kb on - strand, within ABZR87_RS01370 at 286.599 kb on - strand, within ABZR87_RS01370 at 286.599 kb on - strand, within ABZR87_RS01370 at 286.601 kb on + strand, within ABZR87_RS01370 at 286.601 kb on + strand, within ABZR87_RS01370 at 286.601 kb on + strand, within ABZR87_RS01370 at 286.625 kb on + strand, within ABZR87_RS01370 at 286.625 kb on + strand, within ABZR87_RS01370 at 286.626 kb on - strand, within ABZR87_RS01370 at 286.626 kb on - strand, within ABZR87_RS01370 at 286.688 kb on + strand, within ABZR87_RS01370 at 286.688 kb on + strand, within ABZR87_RS01370 at 286.688 kb on + strand, within ABZR87_RS01370 at 286.688 kb on + strand, within ABZR87_RS01370 at 286.688 kb on + strand, within ABZR87_RS01370 at 286.689 kb on - strand, within ABZR87_RS01370 at 286.689 kb on - strand, within ABZR87_RS01370 at 286.689 kb on - strand, within ABZR87_RS01370 at 286.689 kb on - strand, within ABZR87_RS01370 at 286.689 kb on - strand, within ABZR87_RS01370 at 286.689 kb on - strand, within ABZR87_RS01370 at 286.689 kb on - strand, within ABZR87_RS01370 at 286.689 kb on - strand, within ABZR87_RS01370 at 286.689 kb on - strand, within ABZR87_RS01370 at 286.689 kb on - strand, within ABZR87_RS01370 at 286.799 kb on + strand, within ABZR87_RS01370 at 286.799 kb on + strand, within ABZR87_RS01370 at 286.799 kb on + strand, within ABZR87_RS01370 at 286.799 kb on + strand, within ABZR87_RS01370 at 286.805 kb on + strand, within ABZR87_RS01370 at 286.805 kb on + strand, within ABZR87_RS01370 at 286.805 kb on + strand, within ABZR87_RS01370 at 286.805 kb on + strand, within ABZR87_RS01370 at 286.806 kb on - strand, within ABZR87_RS01370 at 286.806 kb on - strand, within ABZR87_RS01370 at 286.806 kb on - strand, within ABZR87_RS01370 at 286.806 kb on - strand, within ABZR87_RS01370 at 286.806 kb on - strand, within ABZR87_RS01370 at 286.806 kb on - strand, within ABZR87_RS01370 at 286.806 kb on - strand, within ABZR87_RS01370 at 287.132 kb on + strand, within ABZR87_RS01370 at 287.133 kb on - strand, within ABZR87_RS01370 at 287.295 kb on + strand, within ABZR87_RS01370 at 287.296 kb on - strand, within ABZR87_RS01370 at 287.517 kb on - strand at 287.652 kb on + strand at 287.653 kb on - strand at 287.653 kb on - strand at 287.709 kb on + strand at 287.883 kb on + strand, within ABZR87_RS01375 at 287.883 kb on + strand, within ABZR87_RS01375 at 287.884 kb on - strand, within ABZR87_RS01375 at 287.884 kb on - strand, within ABZR87_RS01375 at 287.884 kb on - strand, within ABZR87_RS01375 at 287.884 kb on - strand, within ABZR87_RS01375 at 287.952 kb on + strand, within ABZR87_RS01375 at 287.953 kb on - strand, within ABZR87_RS01375 at 288.205 kb on - strand, within ABZR87_RS01375 at 288.205 kb on - strand, within ABZR87_RS01375 at 288.253 kb on - strand, within ABZR87_RS01375 at 288.253 kb on - strand, within ABZR87_RS01375 at 288.321 kb on + strand, within ABZR87_RS01375 at 288.321 kb on + strand, within ABZR87_RS01375 at 288.321 kb on + strand, within ABZR87_RS01375 at 288.321 kb on + strand, within ABZR87_RS01375 at 288.322 kb on - strand, within ABZR87_RS01375 at 288.322 kb on - strand, within ABZR87_RS01375 at 288.357 kb on + strand, within ABZR87_RS01375
Per-strain Table
Position Strand Gene LocusTag Fraction C.elegans, mixed culture-2 remove 285,376 + ABZR87_RS01365 0.37 -0.5 285,376 + ABZR87_RS01365 0.37 -1.5 285,376 + ABZR87_RS01365 0.37 -0.2 285,377 - ABZR87_RS01365 0.37 -0.4 285,377 - ABZR87_RS01365 0.37 -0.6 285,377 - ABZR87_RS01365 0.37 +0.4 285,377 - ABZR87_RS01365 0.37 -0.4 285,377 - ABZR87_RS01365 0.37 -0.6 285,377 - ABZR87_RS01365 0.37 -0.5 285,490 + ABZR87_RS01365 0.45 -0.4 285,490 + ABZR87_RS01365 0.45 -0.4 285,490 + ABZR87_RS01365 0.45 +0.2 285,490 + ABZR87_RS01365 0.45 -0.0 285,491 - ABZR87_RS01365 0.45 -1.0 285,491 - ABZR87_RS01365 0.45 -0.9 285,491 - ABZR87_RS01365 0.45 -3.5 285,499 + ABZR87_RS01365 0.46 -0.2 285,499 + ABZR87_RS01365 0.46 +0.4 285,500 - ABZR87_RS01365 0.46 -0.9 285,500 - ABZR87_RS01365 0.46 -0.8 285,500 - ABZR87_RS01365 0.46 -0.7 285,500 - ABZR87_RS01365 0.46 +1.8 285,500 - ABZR87_RS01365 0.46 -0.1 285,500 - ABZR87_RS01365 0.46 -1.3 285,517 + ABZR87_RS01365 0.47 -0.3 285,529 + ABZR87_RS01365 0.48 +0.8 285,530 - ABZR87_RS01365 0.48 -0.1 285,580 + ABZR87_RS01365 0.52 -0.7 285,580 + ABZR87_RS01365 0.52 -0.1 285,580 + ABZR87_RS01365 0.52 +0.4 285,580 + ABZR87_RS01365 0.52 +0.5 285,581 - ABZR87_RS01365 0.52 -0.7 285,581 - ABZR87_RS01365 0.52 +1.0 285,661 + ABZR87_RS01365 0.57 -1.0 285,661 + ABZR87_RS01365 0.57 +0.7 285,662 - ABZR87_RS01365 0.57 -0.6 285,662 - ABZR87_RS01365 0.57 -0.9 285,662 - ABZR87_RS01365 0.57 -0.9 285,826 + ABZR87_RS01365 0.69 -0.5 285,826 + ABZR87_RS01365 0.69 -0.0 285,826 + ABZR87_RS01365 0.69 +0.4 285,826 + ABZR87_RS01365 0.69 -1.3 285,827 - ABZR87_RS01365 0.69 -0.8 285,967 + ABZR87_RS01365 0.79 -0.2 285,967 + ABZR87_RS01365 0.79 +1.0 285,968 - ABZR87_RS01365 0.79 -1.7 285,968 - ABZR87_RS01365 0.79 -1.1 285,968 - ABZR87_RS01365 0.79 -0.6 285,968 - ABZR87_RS01365 0.79 -0.8 285,988 + ABZR87_RS01365 0.80 +0.2 285,988 + ABZR87_RS01365 0.80 +0.0 285,989 - ABZR87_RS01365 0.81 -1.3 285,989 - ABZR87_RS01365 0.81 -0.3 285,989 - ABZR87_RS01365 0.81 -1.1 286,025 - ABZR87_RS01365 0.83 +0.6 286,123 + +0.6 286,123 + +1.0 286,124 - -1.6 286,124 - -0.8 286,192 + +1.0 286,194 + -0.4 286,217 + -0.1 286,217 + +0.0 286,217 + +0.3 286,218 - -0.7 286,261 + +0.5 286,294 + -0.3 286,294 + -0.9 286,295 - -0.2 286,401 - -0.8 286,409 + -0.4 286,409 + -0.5 286,409 + -0.5 286,409 + -0.3 286,409 + -0.9 286,409 + -0.8 286,410 - -1.2 286,410 - -0.5 286,410 - -0.2 286,410 - -1.8 286,410 - -0.9 286,410 - -0.8 286,410 - -0.0 286,410 - -0.8 286,410 - -0.2 286,487 + ABZR87_RS01370 0.15 -1.5 286,488 - ABZR87_RS01370 0.15 -0.0 286,488 - ABZR87_RS01370 0.15 -1.0 286,488 - ABZR87_RS01370 0.15 -1.0 286,571 + ABZR87_RS01370 0.22 -0.7 286,571 + ABZR87_RS01370 0.22 -0.2 286,572 - ABZR87_RS01370 0.22 -0.0 286,572 - ABZR87_RS01370 0.22 -0.8 286,572 - ABZR87_RS01370 0.22 -0.8 286,572 - ABZR87_RS01370 0.22 -0.6 286,598 + ABZR87_RS01370 0.24 -1.2 286,598 + ABZR87_RS01370 0.24 +0.6 286,598 + ABZR87_RS01370 0.24 -1.8 286,598 + ABZR87_RS01370 0.24 -0.2 286,599 - ABZR87_RS01370 0.24 -0.5 286,599 - ABZR87_RS01370 0.24 +0.1 286,599 - ABZR87_RS01370 0.24 -0.8 286,599 - ABZR87_RS01370 0.24 -1.1 286,601 + ABZR87_RS01370 0.24 -0.6 286,601 + ABZR87_RS01370 0.24 -0.5 286,601 + ABZR87_RS01370 0.24 -1.6 286,625 + ABZR87_RS01370 0.26 -0.2 286,625 + ABZR87_RS01370 0.26 -0.4 286,626 - ABZR87_RS01370 0.26 -0.3 286,626 - ABZR87_RS01370 0.26 -0.6 286,688 + ABZR87_RS01370 0.30 -0.6 286,688 + ABZR87_RS01370 0.30 -1.2 286,688 + ABZR87_RS01370 0.30 -1.4 286,688 + ABZR87_RS01370 0.30 +0.0 286,688 + ABZR87_RS01370 0.30 -0.9 286,689 - ABZR87_RS01370 0.31 -0.4 286,689 - ABZR87_RS01370 0.31 -0.5 286,689 - ABZR87_RS01370 0.31 -1.5 286,689 - ABZR87_RS01370 0.31 -0.5 286,689 - ABZR87_RS01370 0.31 -0.3 286,689 - ABZR87_RS01370 0.31 -0.2 286,689 - ABZR87_RS01370 0.31 -0.7 286,689 - ABZR87_RS01370 0.31 -1.1 286,689 - ABZR87_RS01370 0.31 -0.0 286,689 - ABZR87_RS01370 0.31 -0.5 286,799 + ABZR87_RS01370 0.39 +0.9 286,799 + ABZR87_RS01370 0.39 -0.5 286,799 + ABZR87_RS01370 0.39 -0.2 286,799 + ABZR87_RS01370 0.39 +0.8 286,805 + ABZR87_RS01370 0.39 -1.4 286,805 + ABZR87_RS01370 0.39 -0.2 286,805 + ABZR87_RS01370 0.39 -0.6 286,805 + ABZR87_RS01370 0.39 -0.0 286,806 - ABZR87_RS01370 0.39 +0.1 286,806 - ABZR87_RS01370 0.39 -1.7 286,806 - ABZR87_RS01370 0.39 -1.4 286,806 - ABZR87_RS01370 0.39 +0.1 286,806 - ABZR87_RS01370 0.39 +0.0 286,806 - ABZR87_RS01370 0.39 +0.0 286,806 - ABZR87_RS01370 0.39 -0.4 287,132 + ABZR87_RS01370 0.64 -0.2 287,133 - ABZR87_RS01370 0.64 +0.1 287,295 + ABZR87_RS01370 0.76 -0.6 287,296 - ABZR87_RS01370 0.76 -0.2 287,517 - -1.0 287,652 + -0.2 287,653 - -1.2 287,653 - -0.5 287,709 + -0.7 287,883 + ABZR87_RS01375 0.24 -0.9 287,883 + ABZR87_RS01375 0.24 -0.7 287,884 - ABZR87_RS01375 0.24 +0.3 287,884 - ABZR87_RS01375 0.24 -0.1 287,884 - ABZR87_RS01375 0.24 -1.3 287,884 - ABZR87_RS01375 0.24 -0.2 287,952 + ABZR87_RS01375 0.30 -0.1 287,953 - ABZR87_RS01375 0.30 -0.4 288,205 - ABZR87_RS01375 0.53 -0.6 288,205 - ABZR87_RS01375 0.53 -1.9 288,253 - ABZR87_RS01375 0.57 -1.0 288,253 - ABZR87_RS01375 0.57 +0.1 288,321 + ABZR87_RS01375 0.63 -1.1 288,321 + ABZR87_RS01375 0.63 -0.3 288,321 + ABZR87_RS01375 0.63 -0.3 288,321 + ABZR87_RS01375 0.63 +0.5 288,322 - ABZR87_RS01375 0.64 -1.5 288,322 - ABZR87_RS01375 0.64 -0.9 288,357 + ABZR87_RS01375 0.67 -1.0
Or see this region's nucleotide sequence