Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS15470

Experiment: C.elegans, mixed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	C.elegans, mixed culture-1
3,255,435	+				+0.5
3,255,446	+				+0.3
3,255,731	+		ABZR87_RS15465	0.26	-0.8
3,255,731	+		ABZR87_RS15465	0.26	-1.2
3,255,731	+		ABZR87_RS15465	0.26	+0.6
3,255,732	-		ABZR87_RS15465	0.26	-0.1
3,255,812	+		ABZR87_RS15465	0.35	-0.2
3,255,812	+		ABZR87_RS15465	0.35	-0.3
3,255,812	+		ABZR87_RS15465	0.35	+0.2
3,255,812	+		ABZR87_RS15465	0.35	+2.1
3,255,812	+		ABZR87_RS15465	0.35	-0.1
3,255,813	-		ABZR87_RS15465	0.35	-2.0
3,255,813	-		ABZR87_RS15465	0.35	+0.2
3,255,813	-		ABZR87_RS15465	0.35	+0.8
3,255,813	-		ABZR87_RS15465	0.35	-0.2
3,255,873	+		ABZR87_RS15465	0.42	-0.3
3,255,873	+		ABZR87_RS15465	0.42	-0.5
3,255,873	+		ABZR87_RS15465	0.42	-0.6
3,255,874	-		ABZR87_RS15465	0.42	-0.3
3,255,874	-		ABZR87_RS15465	0.42	-0.4
3,255,874	-		ABZR87_RS15465	0.42	+0.1
3,256,063	+		ABZR87_RS15465	0.63	+0.1
3,256,109	+		ABZR87_RS15465	0.68	+0.6
3,256,110	-		ABZR87_RS15465	0.68	+0.0
3,256,412	+				-0.2
3,256,412	+				-0.5
3,256,413	-				-0.1
3,256,413	-				+0.3
3,256,571	+		ABZR87_RS15470	0.27	+0.3
3,256,572	-		ABZR87_RS15470	0.27	-0.6
3,256,572	-		ABZR87_RS15470	0.27	-0.5
3,256,572	-		ABZR87_RS15470	0.27	-0.5
3,256,665	-		ABZR87_RS15470	0.43	-0.3
3,256,707	-		ABZR87_RS15470	0.50	+0.1
3,256,742	+		ABZR87_RS15470	0.55	-0.4
3,256,742	+		ABZR87_RS15470	0.55	+0.6
3,256,742	+		ABZR87_RS15470	0.55	-0.8
3,256,742	+		ABZR87_RS15470	0.55	-0.8
3,256,743	-		ABZR87_RS15470	0.56	-0.2
3,256,838	+		ABZR87_RS15470	0.72	+0.2
3,256,838	+		ABZR87_RS15470	0.72	-0.3
3,256,839	-		ABZR87_RS15470	0.72	+0.0
3,257,059	+				-0.5
3,257,059	+				-0.1
3,257,096	-				-0.3
3,257,096	-				-1.1
3,257,096	-				-2.9