Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS12685

Experiment: C.elegans, mixed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	C.elegans, mixed culture-1
2,686,057	-				-0.8
2,686,112	+				-0.3
2,686,112	+				-0.2
2,686,112	+				+1.2
2,686,218	+				-1.0
2,686,218	+				-1.8
2,686,219	-				+0.2
2,686,219	-				-0.1
2,686,543	+		ABZR87_RS12680	0.43	-0.1
2,686,651	+		ABZR87_RS12680	0.59	-0.6
2,686,651	+		ABZR87_RS12680	0.59	-1.0
2,686,651	+		ABZR87_RS12680	0.59	+0.3
2,686,828	+		ABZR87_RS12680	0.85	+0.8
2,686,828	+		ABZR87_RS12680	0.85	-0.0
2,686,829	-		ABZR87_RS12680	0.85	+0.7
2,686,829	-		ABZR87_RS12680	0.85	+0.8
2,686,829	-		ABZR87_RS12680	0.85	-0.3
2,686,898	-				+1.3
2,686,898	-				-2.5
2,686,898	-				-1.4
2,687,133	+		ABZR87_RS12685	0.14	+0.8
2,687,133	+		ABZR87_RS12685	0.14	-1.2
2,687,277	+		ABZR87_RS12685	0.25	-0.4
2,687,620	-		ABZR87_RS12685	0.49	-1.1
2,688,177	+		ABZR87_RS12685	0.88	+0.7
2,688,178	-		ABZR87_RS12685	0.88	-0.9
2,688,178	-		ABZR87_RS12685	0.88	-1.7
2,688,309	+				-0.7
2,688,310	-				-0.1
2,688,382	+				-0.6
2,688,383	-				+0.5
2,688,417	+				-0.6
2,688,417	+				-0.9
2,688,418	-				+0.9
2,688,498	+				-0.2
2,688,499	-				-0.9
2,688,530	+				-1.3
2,688,530	+				-0.7
2,688,531	-				-0.7
2,688,604	+				-0.4
2,688,713	+				-0.2
2,688,715	+				+1.6
2,688,715	+				-0.1
2,688,716	-				-0.5
2,688,716	-				-0.9
2,688,716	-				-0.2
2,688,851	+				-0.3
2,688,851	+				-1.4
2,688,852	-				-0.4
2,688,852	-				+0.7
2,688,852	-				-0.0
2,688,852	-				+0.1
2,688,852	-				+0.5
2,688,852	-				+0.5
2,688,904	+				-0.5
2,688,904	+				+0.0
2,688,905	-				-0.1
2,688,905	-				+0.2
2,688,905	-				-0.3
2,688,915	+				-0.0
2,688,915	+				+0.7
2,688,915	+				+0.2
2,688,916	-				-1.6
2,688,916	-				-0.8
2,688,916	-				+0.4
2,688,916	-				-0.4
2,688,961	-				+1.0
2,688,961	-				-0.6
2,688,961	-				+0.1
2,689,131	+		ABZR87_RS12690	0.24	+0.2
2,689,131	+		ABZR87_RS12690	0.24	+0.3
2,689,173	+		ABZR87_RS12690	0.28	-0.3