Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS12250

Experiment: C.elegans, mixed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	C.elegans, mixed culture-1
2,596,713	+				-1.7
2,596,714	-				+0.4
2,596,740	-				-0.9
2,596,968	-		ABZR87_RS12245	0.34	+0.2
2,596,982	+		ABZR87_RS12245	0.35	-2.5
2,596,983	-		ABZR87_RS12245	0.35	-0.2
2,596,983	-		ABZR87_RS12245	0.35	+0.4
2,597,191	+		ABZR87_RS12245	0.59	+0.1
2,597,191	+		ABZR87_RS12245	0.59	-1.1
2,597,191	+		ABZR87_RS12245	0.59	+0.7
2,597,192	-		ABZR87_RS12245	0.59	+0.7
2,597,192	-		ABZR87_RS12245	0.59	-0.0
2,597,247	-		ABZR87_RS12245	0.65	-0.2
2,597,328	-		ABZR87_RS12245	0.74	-0.9
2,597,328	-		ABZR87_RS12245	0.74	+0.3
2,597,328	-		ABZR87_RS12245	0.74	-0.1
2,597,357	+		ABZR87_RS12245	0.77	+0.1
2,597,357	+		ABZR87_RS12245	0.77	+0.6
2,597,357	+		ABZR87_RS12245	0.77	+0.4
2,597,358	-		ABZR87_RS12245	0.77	-1.4
2,597,510	+				+0.5
2,597,510	+				+1.7
2,597,511	-				-1.3
2,597,629	+				-0.3
2,597,651	+				-1.0
2,597,652	-				-1.1
2,597,724	+		ABZR87_RS12250	0.17	+1.1
2,597,724	+		ABZR87_RS12250	0.17	-0.1
2,597,724	+		ABZR87_RS12250	0.17	-0.1
2,597,725	-		ABZR87_RS12250	0.17	+0.3
2,597,873	+		ABZR87_RS12250	0.36	-0.1
2,597,874	-		ABZR87_RS12250	0.36	-0.2
2,597,942	+		ABZR87_RS12250	0.44	-0.4
2,597,942	+		ABZR87_RS12250	0.44	-0.1
2,597,942	+		ABZR87_RS12250	0.44	+0.7
2,597,942	+		ABZR87_RS12250	0.44	-0.1
2,597,942	+		ABZR87_RS12250	0.44	-1.4
2,597,942	+		ABZR87_RS12250	0.44	-0.6
2,597,943	-		ABZR87_RS12250	0.44	+0.1
2,597,943	-		ABZR87_RS12250	0.44	-0.8
2,597,943	-		ABZR87_RS12250	0.44	+1.2
2,597,943	-		ABZR87_RS12250	0.44	+0.0
2,597,943	-		ABZR87_RS12250	0.44	+0.6
2,597,943	-		ABZR87_RS12250	0.44	+0.4
2,597,943	-		ABZR87_RS12250	0.44	-0.9
2,597,943	-		ABZR87_RS12250	0.44	+0.1
2,597,943	-		ABZR87_RS12250	0.44	+1.3
2,597,943	-		ABZR87_RS12250	0.44	-0.1
2,597,943	-		ABZR87_RS12250	0.44	-1.3
2,598,190	-		ABZR87_RS12250	0.75	-1.0
2,598,190	-		ABZR87_RS12250	0.75	-0.1
2,598,190	-		ABZR87_RS12250	0.75	+0.3
2,598,311	+				-0.1
2,598,312	-				+1.0
2,598,387	-				-0.2
2,598,387	-				+0.9
2,598,641	+				+1.0
2,598,641	+				-0.2
2,598,642	-				-0.6
2,598,642	-				-1.4
2,598,642	-				+0.0
2,598,642	-				-0.2
2,598,651	-		ABZR87_RS12255	0.10	-0.2
2,598,651	-		ABZR87_RS12255	0.10	+0.5
2,598,651	-		ABZR87_RS12255	0.10	-0.2
2,598,684	-		ABZR87_RS12255	0.12	-0.5
2,598,685	+		ABZR87_RS12255	0.12	-0.6
2,598,685	+		ABZR87_RS12255	0.12	-0.3
2,598,685	+		ABZR87_RS12255	0.12	-1.2
2,598,686	-		ABZR87_RS12255	0.12	+0.6
2,598,848	+		ABZR87_RS12255	0.19	-0.3
2,598,848	+		ABZR87_RS12255	0.19	-1.2
2,598,849	-		ABZR87_RS12255	0.19	-0.0
2,598,863	+		ABZR87_RS12255	0.19	-0.1
2,598,884	+		ABZR87_RS12255	0.20	-1.0
2,598,884	+		ABZR87_RS12255	0.20	+1.0
2,598,884	+		ABZR87_RS12255	0.20	+0.8
2,598,884	+		ABZR87_RS12255	0.20	+1.4
2,598,885	-		ABZR87_RS12255	0.20	+0.9
2,598,929	+		ABZR87_RS12255	0.22	-0.4
2,598,929	+		ABZR87_RS12255	0.22	-0.4
2,598,929	+		ABZR87_RS12255	0.22	+0.8
2,598,929	+		ABZR87_RS12255	0.22	-0.6
2,598,930	-		ABZR87_RS12255	0.22	+0.7
2,598,930	-		ABZR87_RS12255	0.22	+0.2
2,598,930	-		ABZR87_RS12255	0.22	-0.2
2,598,944	+		ABZR87_RS12255	0.23	+0.3
2,598,944	+		ABZR87_RS12255	0.23	-1.5
2,598,944	+		ABZR87_RS12255	0.23	+0.6
2,598,944	+		ABZR87_RS12255	0.23	+0.2
2,598,945	-		ABZR87_RS12255	0.23	+0.8
2,599,136	+		ABZR87_RS12255	0.31	-0.8
2,599,136	+		ABZR87_RS12255	0.31	-1.7
2,599,136	+		ABZR87_RS12255	0.31	-0.6
2,599,136	+		ABZR87_RS12255	0.31	-0.0
2,599,136	+		ABZR87_RS12255	0.31	+0.4
2,599,137	-		ABZR87_RS12255	0.31	+0.4