Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS12180

Experiment: C.elegans, mixed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	C.elegans, mixed culture-1
2,581,356	+				-0.7
2,581,356	+				-0.1
2,581,537	+		ABZR87_RS12175	0.27	-0.3
2,581,537	+		ABZR87_RS12175	0.27	+0.4
2,581,538	-		ABZR87_RS12175	0.27	+0.4
2,581,538	-		ABZR87_RS12175	0.27	+0.3
2,581,699	-		ABZR87_RS12175	0.45	+0.6
2,581,839	+		ABZR87_RS12175	0.61	+0.4
2,581,993	-		ABZR87_RS12175	0.78	+1.1
2,582,106	-				+0.7
2,582,163	+				-0.6
2,582,164	-				+0.4
2,582,237	-				+0.3
2,582,493	+		ABZR87_RS12180	0.33	+0.2
2,582,515	-		ABZR87_RS12180	0.37	+0.2
2,582,524	-		ABZR87_RS12180	0.39	+0.4
2,582,535	+		ABZR87_RS12180	0.41	-0.4
2,582,535	+		ABZR87_RS12180	0.41	-1.1
2,582,535	+		ABZR87_RS12180	0.41	+0.7
2,582,535	+		ABZR87_RS12180	0.41	+0.8
2,582,536	-		ABZR87_RS12180	0.41	+0.3
2,582,536	-		ABZR87_RS12180	0.41	-0.1
2,582,563	+		ABZR87_RS12180	0.46	-0.2
2,582,654	-		ABZR87_RS12180	0.63	-0.3
2,582,654	-		ABZR87_RS12180	0.63	+0.1
2,582,655	+		ABZR87_RS12180	0.63	-1.1
2,582,655	+		ABZR87_RS12180	0.63	-1.2
2,582,656	-		ABZR87_RS12180	0.64	-0.9
2,582,656	-		ABZR87_RS12180	0.64	+1.2
2,582,832	+				-0.5
2,582,833	-				-0.1
2,582,833	-				+0.4
2,582,897	+				+0.0
2,582,897	+				+0.1
2,582,897	+				+0.5
2,582,897	+				-1.0
2,582,902	+				+1.9
2,582,902	+				+0.6
2,582,903	-				-0.3
2,582,903	-				-0.5
2,582,913	+				+0.4
2,583,206	-		ABZR87_RS12185	0.14	+0.6
2,583,325	+		ABZR87_RS12185	0.23	+0.9
2,583,326	-		ABZR87_RS12185	0.23	+0.4
2,583,327	+		ABZR87_RS12185	0.23	+0.3
2,583,327	+		ABZR87_RS12185	0.23	+1.2
2,583,327	+		ABZR87_RS12185	0.23	+0.7
2,583,328	-		ABZR87_RS12185	0.23	-0.1
2,583,328	-		ABZR87_RS12185	0.23	+0.7
2,583,328	-		ABZR87_RS12185	0.23	-0.5
2,583,443	-		ABZR87_RS12185	0.31	+0.4
2,583,605	-		ABZR87_RS12185	0.42	-0.1