Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS12170

Experiment: C.elegans, mixed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	C.elegans, mixed culture-1
2,578,825	+		ABZR87_RS12165	0.61	-2.9
2,578,825	+		ABZR87_RS12165	0.61	-0.2
2,578,825	+		ABZR87_RS12165	0.61	-2.7
2,578,825	+		ABZR87_RS12165	0.61	+1.0
2,578,826	-		ABZR87_RS12165	0.61	+0.1
2,579,020	+		ABZR87_RS12165	0.73	+0.5
2,579,039	-		ABZR87_RS12165	0.74	-0.2
2,579,039	-		ABZR87_RS12165	0.74	-1.3
2,579,426	-				+0.6
2,579,434	+				-0.2
2,579,435	-				+0.6
2,579,435	-				-0.5
2,579,435	-				-0.6
2,579,623	+				-0.3
2,579,623	+				-0.8
2,579,624	-				+0.0
2,579,638	+				-0.7
2,579,638	+				-1.0
2,579,639	-				+0.0
2,579,639	-				+0.9
2,579,718	+				-0.3
2,579,719	-				+0.1
2,579,745	-				-1.7
2,579,745	-				+0.3
2,579,745	-				+0.5
2,579,745	-				-0.2
2,579,965	+		ABZR87_RS12170	0.15	-0.3
2,579,966	-		ABZR87_RS12170	0.15	-0.3
2,580,272	+		ABZR87_RS12170	0.35	-2.3
2,580,273	-		ABZR87_RS12170	0.35	+0.2
2,580,348	+		ABZR87_RS12170	0.40	+0.0
2,580,348	+		ABZR87_RS12170	0.40	+0.2
2,580,348	+		ABZR87_RS12170	0.40	+0.9
2,580,348	+		ABZR87_RS12170	0.40	+0.6
2,580,348	+		ABZR87_RS12170	0.40	+0.3
2,580,348	+		ABZR87_RS12170	0.40	-0.2
2,580,348	+		ABZR87_RS12170	0.40	+1.6
2,580,348	+		ABZR87_RS12170	0.40	+1.2
2,580,349	-		ABZR87_RS12170	0.40	-0.7
2,580,349	-		ABZR87_RS12170	0.40	+0.7
2,580,349	-		ABZR87_RS12170	0.40	+1.0
2,580,349	-		ABZR87_RS12170	0.40	+0.2
2,580,349	-		ABZR87_RS12170	0.40	-1.9
2,580,349	-		ABZR87_RS12170	0.40	+0.2
2,580,349	-		ABZR87_RS12170	0.40	-0.1
2,580,350	+		ABZR87_RS12170	0.40	+3.1
2,580,350	+		ABZR87_RS12170	0.40	-0.4
2,580,351	-		ABZR87_RS12170	0.40	+0.1
2,580,351	-		ABZR87_RS12170	0.40	+0.4
2,580,432	-		ABZR87_RS12170	0.45	+0.3
2,580,566	+		ABZR87_RS12170	0.54	+0.0
2,580,566	+		ABZR87_RS12170	0.54	-0.5
2,580,597	+		ABZR87_RS12170	0.56	-2.8
2,580,598	-		ABZR87_RS12170	0.56	-0.0
2,580,598	-		ABZR87_RS12170	0.56	+0.6
2,580,694	-		ABZR87_RS12170	0.62	+0.2
2,580,694	-		ABZR87_RS12170	0.62	-0.4
2,580,723	+		ABZR87_RS12170	0.64	+0.5
2,580,828	+		ABZR87_RS12170	0.71	+0.2
2,580,828	+		ABZR87_RS12170	0.71	+0.5
2,580,828	+		ABZR87_RS12170	0.71	-0.5
2,580,829	-		ABZR87_RS12170	0.71	+0.3
2,580,956	+		ABZR87_RS12170	0.79	-0.2
2,581,129	-				-0.5
2,581,160	+				-0.0
2,581,161	-				-0.7
2,581,161	-				+1.1
2,581,356	+				-0.7
2,581,356	+				-0.1
2,581,537	+		ABZR87_RS12175	0.27	-0.3
2,581,537	+		ABZR87_RS12175	0.27	+0.4
2,581,538	-		ABZR87_RS12175	0.27	+0.4
2,581,538	-		ABZR87_RS12175	0.27	+0.3
2,581,699	-		ABZR87_RS12175	0.45	+0.6
2,581,839	+		ABZR87_RS12175	0.61	+0.4
2,581,993	-		ABZR87_RS12175	0.78	+1.1
2,582,106	-				+0.7
2,582,163	+				-0.6
2,582,164	-				+0.4
2,582,237	-				+0.3