Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS01920

Experiment: C.elegans, mixed culture-1

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABZR87_RS01915 and ABZR87_RS01920 are separated by 140 nucleotidesABZR87_RS01920 and ABZR87_RS01925 overlap by 4 nucleotidesABZR87_RS01925 and ABZR87_RS01930 are separated by 37 nucleotides ABZR87_RS01915: ABZR87_RS01915 - cell division protein FtsZ, at 406,072 to 407,271 _RS01915 ABZR87_RS01920: ABZR87_RS01920 - cell division protein FtsA, at 407,412 to 408,644 _RS01920 ABZR87_RS01925: ABZR87_RS01925 - cell division protein FtsQ/DivIB, at 408,641 to 409,552 _RS01925 ABZR87_RS01930: ABZR87_RS01930 - D-alanine--D-alanine ligase, at 409,590 to 410,585 _RS01930 Position (kb) 407 408 409Strain fitness (log2 ratio) -1 0 1at 409.553 kb on - strandat 409.553 kb on - strandat 409.553 kb on - strandat 409.553 kb on - strandat 409.553 kb on - strandat 409.553 kb on - strandat 409.553 kb on - strandat 409.553 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction C.elegans, mixed culture-1
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409,553 - +0.8
409,553 - -0.8
409,553 - +0.3
409,553 - +0.2
409,553 - +1.0
409,553 - +0.1
409,553 - -0.3
409,553 - +0.3

Or see this region's nucleotide sequence