Experiment: Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x and biotin 0.32 ug/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS23715 and BWI76_RS23720 are separated by 13 nucleotides BWI76_RS23720 and BWI76_RS23725 are separated by 109 nucleotides
BWI76_RS23715: BWI76_RS23715 - 2-deoxy-D-ribonate transporter 1 <small>(from data)</small>, at 4,950,374 to 4,951,711
_RS23715
BWI76_RS23720: BWI76_RS23720 - calcium-binding protein, at 4,951,725 to 4,952,603
_RS23720
BWI76_RS23725: BWI76_RS23725 - 2-deoxy-D-ribonate transporter 2 <small>(from data)</small>, at 4,952,713 to 4,954,050
_RS23725
Position (kb) 4951
4952
4953 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 4951.044 kb on - strand, within BWI76_RS23715 at 4951.165 kb on - strand, within BWI76_RS23715 at 4951.334 kb on - strand, within BWI76_RS23715 at 4951.437 kb on - strand, within BWI76_RS23715 at 4951.665 kb on + strand at 4951.937 kb on + strand, within BWI76_RS23720 at 4951.963 kb on - strand, within BWI76_RS23720 at 4951.991 kb on - strand, within BWI76_RS23720 at 4952.238 kb on + strand, within BWI76_RS23720 at 4952.333 kb on - strand, within BWI76_RS23720 at 4952.368 kb on - strand, within BWI76_RS23720 at 4952.488 kb on - strand, within BWI76_RS23720 at 4952.711 kb on - strand at 4952.864 kb on + strand, within BWI76_RS23725 at 4952.872 kb on - strand, within BWI76_RS23725 at 4952.893 kb on - strand, within BWI76_RS23725 at 4952.901 kb on - strand, within BWI76_RS23725 at 4952.924 kb on - strand, within BWI76_RS23725 at 4953.018 kb on + strand, within BWI76_RS23725 at 4953.021 kb on - strand, within BWI76_RS23725 at 4953.026 kb on - strand, within BWI76_RS23725 at 4953.148 kb on + strand, within BWI76_RS23725 at 4953.377 kb on + strand, within BWI76_RS23725 at 4953.536 kb on - strand, within BWI76_RS23725
Per-strain Table
Position Strand Gene LocusTag Fraction Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x and biotin 0.32 ug/ml remove 4,951,044 - BWI76_RS23715 0.50 +1.2 4,951,165 - BWI76_RS23715 0.59 -2.9 4,951,334 - BWI76_RS23715 0.72 +0.6 4,951,437 - BWI76_RS23715 0.79 +0.0 4,951,665 + +0.4 4,951,937 + BWI76_RS23720 0.24 +0.5 4,951,963 - BWI76_RS23720 0.27 +2.6 4,951,991 - BWI76_RS23720 0.30 +0.3 4,952,238 + BWI76_RS23720 0.58 -0.4 4,952,333 - BWI76_RS23720 0.69 +0.2 4,952,368 - BWI76_RS23720 0.73 +0.2 4,952,488 - BWI76_RS23720 0.87 +0.0 4,952,711 - +1.0 4,952,864 + BWI76_RS23725 0.11 +2.9 4,952,872 - BWI76_RS23725 0.12 +1.6 4,952,893 - BWI76_RS23725 0.13 +0.0 4,952,901 - BWI76_RS23725 0.14 +0.8 4,952,924 - BWI76_RS23725 0.16 -0.0 4,953,018 + BWI76_RS23725 0.23 +0.0 4,953,021 - BWI76_RS23725 0.23 +0.1 4,953,026 - BWI76_RS23725 0.23 +0.5 4,953,148 + BWI76_RS23725 0.33 +0.4 4,953,377 + BWI76_RS23725 0.50 -1.6 4,953,536 - BWI76_RS23725 0.62 -0.6
Or see this region's nucleotide sequence