Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS16065

Experiment: Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x and biotin 0.32 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x and biotin 0.32 ug/ml
3,329,424	+		BWI76_RS16060	0.29	-1.2
3,329,432	-		BWI76_RS16060	0.30	-0.8
3,329,522	+		BWI76_RS16060	0.39	+0.7
3,329,564	+		BWI76_RS16060	0.44	-0.2
3,329,756	-		BWI76_RS16060	0.65	-1.3
3,329,948	-				-0.2
3,330,467	+		BWI76_RS16065	0.10	+0.6
3,330,538	-		BWI76_RS16065	0.14	+1.5
3,330,736	-		BWI76_RS16065	0.26	-0.2
3,330,745	-		BWI76_RS16065	0.27	+0.8
3,330,791	+		BWI76_RS16065	0.30	-1.1
3,330,793	-		BWI76_RS16065	0.30	-0.6
3,330,815	+		BWI76_RS16065	0.31	-0.4
3,330,830	+		BWI76_RS16065	0.32	-0.2
3,330,939	-				+2.4
3,331,006	+		BWI76_RS16065	0.43	-1.9
3,331,039	+		BWI76_RS16065	0.45	+0.0
3,331,047	-		BWI76_RS16065	0.45	+0.2
3,331,052	-		BWI76_RS16065	0.45	-1.2
3,331,056	+		BWI76_RS16065	0.46	-0.4
3,331,078	-		BWI76_RS16065	0.47	-1.4
3,331,143	-		BWI76_RS16065	0.51	-1.1
3,331,193	+		BWI76_RS16065	0.54	-1.0
3,331,233	-		BWI76_RS16065	0.56	-2.5
3,331,255	-		BWI76_RS16065	0.58	-1.7
3,331,350	+		BWI76_RS16065	0.63	-2.1
3,331,352	+				-0.6
3,331,352	+		BWI76_RS16065	0.64	+2.6
3,331,352	+		BWI76_RS16065	0.64	+0.2
3,331,359	+		BWI76_RS16065	0.64	+0.7
3,331,359	+		BWI76_RS16065	0.64	-0.9
3,331,360	+		BWI76_RS16065	0.64	+1.0
3,331,360	+		BWI76_RS16065	0.64	+0.3
3,331,360	+		BWI76_RS16065	0.64	+0.4
3,331,365	+		BWI76_RS16065	0.64	-2.7
3,331,367	-		BWI76_RS16065	0.64	-1.6
3,331,367	-		BWI76_RS16065	0.64	+0.9
3,331,368	-		BWI76_RS16065	0.64	+1.2
3,331,370	+		BWI76_RS16065	0.65	+1.0
3,331,373	-		BWI76_RS16065	0.65	+1.0
3,331,382	+		BWI76_RS16065	0.65	+1.4
3,331,382	+		BWI76_RS16065	0.65	-0.9
3,331,390	-		BWI76_RS16065	0.66	+0.2
3,331,390	-		BWI76_RS16065	0.66	+0.0
3,331,390	-		BWI76_RS16065	0.66	-0.9
3,331,399	+		BWI76_RS16065	0.66	-0.2
3,331,399	+		BWI76_RS16065	0.66	-0.7
3,331,407	-		BWI76_RS16065	0.67	-2.3
3,331,461	+		BWI76_RS16065	0.70	+2.1
3,331,464	-		BWI76_RS16065	0.70	-0.7
3,331,469	-		BWI76_RS16065	0.71	-0.2
3,331,473	-		BWI76_RS16065	0.71	+0.5
3,331,486	+		BWI76_RS16065	0.72	+1.4
3,331,493	-		BWI76_RS16065	0.72	-0.6
3,331,494	-		BWI76_RS16065	0.72	-0.2
3,331,494	-		BWI76_RS16065	0.72	-0.5
3,331,494	-		BWI76_RS16065	0.72	+0.8
3,331,494	-		BWI76_RS16065	0.72	-0.2
3,331,494	-		BWI76_RS16065	0.72	-2.7
3,331,524	+		BWI76_RS16065	0.74	+2.0
3,331,532	-		BWI76_RS16065	0.74	-1.6
3,331,536	-		BWI76_RS16065	0.75	-0.8
3,331,548	+		BWI76_RS16065	0.75	+0.2
3,331,549	-		BWI76_RS16065	0.75	-0.6
3,331,577	-		BWI76_RS16065	0.77	+0.1
3,331,577	-		BWI76_RS16065	0.77	-1.9
3,331,587	+		BWI76_RS16065	0.78	+1.4
3,331,590	-		BWI76_RS16065	0.78	+0.4
3,331,597	+		BWI76_RS16065	0.78	-0.6
3,331,597	+		BWI76_RS16065	0.78	+1.4
3,331,597	+		BWI76_RS16065	0.78	-0.2
3,331,597	+		BWI76_RS16065	0.78	+0.5
3,331,597	+		BWI76_RS16065	0.78	+1.8
3,331,605	-		BWI76_RS16065	0.79	-2.3
3,331,605	-		BWI76_RS16065	0.79	-1.2
3,331,605	-		BWI76_RS16065	0.79	+0.4
3,331,605	-		BWI76_RS16065	0.79	+1.4
3,331,605	-		BWI76_RS16065	0.79	-1.8
3,331,607	+		BWI76_RS16065	0.79	+1.3
3,331,615	-		BWI76_RS16065	0.79	-0.4
3,331,623	-		BWI76_RS16065	0.80	+0.6
3,331,623	-		BWI76_RS16065	0.80	-1.4
3,331,738	+		BWI76_RS16065	0.87	+0.4
3,331,771	+		BWI76_RS16065	0.89	-2.4
3,331,779	-		BWI76_RS16065	0.89	-0.4
3,331,779	-		BWI76_RS16065	0.89	+0.4
3,331,789	-		BWI76_RS16065	0.90	-0.2
3,331,801	-				+1.4
3,331,821	-				+1.5
3,332,128	+				-1.9
3,332,162	+				+0.8
3,332,181	+				-0.6
3,332,226	+				-0.9
3,332,247	-				+0.7
3,332,251	+				-0.7
3,332,251	+				+0.6
3,332,251	+				-0.2
3,332,251	+				-0.2
3,332,251	+				+0.4
3,332,251	+				-0.9
3,332,251	+				-0.2
3,332,251	+				+0.5
3,332,251	+				-0.1
3,332,251	+				-1.4
3,332,259	-				-1.2
3,332,259	-				-0.4
3,332,259	-				+0.1
3,332,259	-				+1.6
3,332,259	-				+1.3
3,332,259	-				+0.5
3,332,259	-				-0.2
3,332,259	-				+1.7
3,332,259	-				-0.9
3,332,259	-				+0.8
3,332,259	-				+0.6
3,332,263	+				-0.1
3,332,281	-				-0.9
3,332,281	-				-0.8
3,332,284	+				-0.5
3,332,284	+				-1.8
3,332,284	+				+1.4
3,332,285	+				-1.5
3,332,292	-				+1.2
3,332,293	-				+0.3
3,332,335	+		BWI76_RS16070	0.10	-1.1
3,332,338	-		BWI76_RS16070	0.11	+0.3
3,332,387	+		BWI76_RS16070	0.16	+0.5
3,332,387	+		BWI76_RS16070	0.16	+0.1
3,332,387	+		BWI76_RS16070	0.16	-0.0
3,332,410	+		BWI76_RS16070	0.19	-0.9
3,332,465	-		BWI76_RS16070	0.25	-0.6
3,332,467	-		BWI76_RS16070	0.25	-0.1
3,332,713	-		BWI76_RS16070	0.52	+1.2
3,332,927	+		BWI76_RS16070	0.76	+1.1