Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS05580

Experiment: Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x and biotin 0.32 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x and biotin 0.32 ug/ml
1,167,207	-		BWI76_RS05575	0.19	+0.1
1,167,224	+		BWI76_RS05575	0.20	-0.7
1,167,225	+		BWI76_RS05575	0.20	-0.1
1,167,250	-		BWI76_RS05575	0.22	+1.8
1,167,316	+		BWI76_RS05575	0.28	-0.6
1,167,591	+		BWI76_RS05575	0.53	+1.5
1,167,599	-		BWI76_RS05575	0.54	+0.8
1,167,814	+		BWI76_RS05575	0.73	-0.3
1,167,814	+		BWI76_RS05575	0.73	-0.4
1,167,819	+		BWI76_RS05575	0.73	-0.5
1,167,822	-		BWI76_RS05575	0.74	-2.0
1,167,952	-		BWI76_RS05575	0.85	+0.7
1,168,096	+				-0.1
1,168,096	-				-0.3
1,168,109	-				+0.6
1,168,250	+		BWI76_RS05580	0.11	+0.9
1,168,425	-		BWI76_RS05580	0.26	-0.1
1,168,549	-		BWI76_RS05580	0.36	+0.9
1,168,808	+		BWI76_RS05580	0.57	+1.0
1,168,918	+		BWI76_RS05580	0.66	+1.2
1,168,978	+		BWI76_RS05580	0.71	+0.4
1,168,998	+		BWI76_RS05580	0.73	+0.7
1,169,078	+		BWI76_RS05580	0.80	+1.6
1,169,114	+		BWI76_RS05580	0.83	-0.4
1,169,122	-		BWI76_RS05580	0.83	+0.8
1,169,151	+		BWI76_RS05580	0.86	-0.2
1,169,151	+		BWI76_RS05580	0.86	-1.4
1,169,159	-		BWI76_RS05580	0.86	+1.6
1,169,180	-		BWI76_RS05580	0.88	+0.4
1,169,188	+				+1.0
1,169,226	+				-1.8
1,169,234	-				-0.6
1,169,234	-				+0.0
1,169,235	-				-3.3
1,169,235	-				+1.6
1,169,239	+				-0.6
1,169,355	-				-3.2
1,169,356	-				-3.2
1,169,364	-				+1.4
1,169,374	-				+0.0
1,169,393	+				-1.1
1,169,395	+				-2.4
1,169,399	-				-0.1
1,169,401	-				+0.5
1,169,401	-				+0.3
1,169,401	-				-0.8
1,169,410	-		BWI76_RS05585	0.10	+0.6
1,169,416	-		BWI76_RS05585	0.11	+0.4
1,169,416	-		BWI76_RS05585	0.11	+0.4
1,169,416	-		BWI76_RS05585	0.11	+0.3
1,169,416	-		BWI76_RS05585	0.11	+0.9
1,169,416	-		BWI76_RS05585	0.11	-0.1
1,169,447	+		BWI76_RS05585	0.14	-1.6
1,169,454	-		BWI76_RS05585	0.14	+0.4
1,169,455	-		BWI76_RS05585	0.15	+0.6
1,169,455	-		BWI76_RS05585	0.15	+1.1
1,169,490	-		BWI76_RS05585	0.18	-3.8
1,169,505	+		BWI76_RS05585	0.19	-1.8
1,169,568	+		BWI76_RS05585	0.26	+1.7
1,169,593	-		BWI76_RS05585	0.28	-1.0
1,169,632	+		BWI76_RS05585	0.32	-0.6
1,169,653	+		BWI76_RS05585	0.34	-0.4
1,169,713	+		BWI76_RS05585	0.40	-0.1
1,169,726	-		BWI76_RS05585	0.41	+0.0
1,169,800	-		BWI76_RS05585	0.48	+0.8
1,169,803	+		BWI76_RS05585	0.48	+1.0
1,169,811	-		BWI76_RS05585	0.49	-0.8
1,169,826	-		BWI76_RS05585	0.51	+1.0
1,169,826	-		BWI76_RS05585	0.51	-0.1
1,169,826	-		BWI76_RS05585	0.51	-0.1
1,169,861	+		BWI76_RS05585	0.54	-1.8
1,169,892	+		BWI76_RS05585	0.57	-0.4
1,169,900	-		BWI76_RS05585	0.58	-1.3
1,169,963	-		BWI76_RS05585	0.64	-0.2
1,170,022	-		BWI76_RS05585	0.70	-1.3
1,170,109	+		BWI76_RS05585	0.78	+0.7
1,170,228	+		BWI76_RS05585	0.90	+0.3
1,170,228	+		BWI76_RS05585	0.90	+0.4
1,170,236	-				+0.5
1,170,275	+				-1.4