Experiment: Carbon source D-Mannitol 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_26670 and AO356_26675 are separated by 446 nucleotides AO356_26675 and AO356_26680 are separated by 83 nucleotides AO356_26680 and AO356_26685 are separated by 94 nucleotides
AO356_26670: AO356_26670 - histidine kinase, at 6,072,114 to 6,074,324
_26670
AO356_26675: AO356_26675 - hypothetical protein, at 6,074,771 to 6,075,313
_26675
AO356_26680: AO356_26680 - hypothetical protein, at 6,075,397 to 6,076,095
_26680
AO356_26685: AO356_26685 - phosphate import ATP-binding protein PstB, at 6,076,190 to 6,076,951
_26685
Position (kb)
6074
6075
6076 Strain fitness (log2 ratio)
-1
0
1 at 6073.907 kb on + strand, within AO356_26670 at 6074.107 kb on + strand at 6074.107 kb on + strand at 6074.175 kb on - strand at 6074.229 kb on + strand at 6074.230 kb on - strand at 6074.318 kb on + strand at 6074.318 kb on + strand at 6074.400 kb on - strand at 6074.420 kb on + strand at 6074.421 kb on - strand at 6074.625 kb on + strand at 6074.625 kb on + strand at 6074.628 kb on + strand at 6074.628 kb on + strand at 6074.641 kb on - strand at 6074.668 kb on - strand at 6074.681 kb on - strand at 6074.683 kb on - strand at 6074.866 kb on + strand, within AO356_26675 at 6074.866 kb on + strand, within AO356_26675 at 6075.096 kb on + strand, within AO356_26675 at 6075.097 kb on - strand, within AO356_26675 at 6075.121 kb on + strand, within AO356_26675 at 6075.122 kb on - strand, within AO356_26675 at 6075.122 kb on - strand, within AO356_26675 at 6075.124 kb on - strand, within AO356_26675 at 6075.124 kb on - strand, within AO356_26675 at 6075.124 kb on - strand, within AO356_26675 at 6075.124 kb on - strand, within AO356_26675 at 6075.294 kb on - strand at 6075.485 kb on + strand, within AO356_26680 at 6075.547 kb on + strand, within AO356_26680 at 6075.608 kb on - strand, within AO356_26680 at 6075.629 kb on + strand, within AO356_26680 at 6075.630 kb on - strand, within AO356_26680 at 6075.630 kb on - strand, within AO356_26680 at 6075.701 kb on + strand, within AO356_26680 at 6075.701 kb on + strand, within AO356_26680 at 6075.701 kb on + strand, within AO356_26680 at 6075.702 kb on - strand, within AO356_26680 at 6075.702 kb on - strand, within AO356_26680 at 6075.932 kb on + strand, within AO356_26680 at 6076.086 kb on + strand at 6076.192 kb on - strand at 6076.212 kb on + strand at 6076.212 kb on + strand at 6076.212 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Carbon source D-Mannitol 5 mM remove 6,073,907 + AO356_26670 0.81 -0.6 6,074,107 + +0.7 6,074,107 + -0.4 6,074,175 - +0.5 6,074,229 + +0.1 6,074,230 - -0.5 6,074,318 + +0.1 6,074,318 + -0.5 6,074,400 - +0.0 6,074,420 + +0.2 6,074,421 - -1.5 6,074,625 + +0.4 6,074,625 + -1.6 6,074,628 + -0.0 6,074,628 + -0.3 6,074,641 - +1.0 6,074,668 - -0.3 6,074,681 - +1.4 6,074,683 - -1.4 6,074,866 + AO356_26675 0.17 -0.8 6,074,866 + AO356_26675 0.17 +0.5 6,075,096 + AO356_26675 0.60 -1.7 6,075,097 - AO356_26675 0.60 +0.5 6,075,121 + AO356_26675 0.64 +0.5 6,075,122 - AO356_26675 0.65 +0.5 6,075,122 - AO356_26675 0.65 -0.0 6,075,124 - AO356_26675 0.65 -1.2 6,075,124 - AO356_26675 0.65 +0.3 6,075,124 - AO356_26675 0.65 -0.9 6,075,124 - AO356_26675 0.65 -1.5 6,075,294 - -0.4 6,075,485 + AO356_26680 0.13 -1.7 6,075,547 + AO356_26680 0.21 +0.4 6,075,608 - AO356_26680 0.30 -1.4 6,075,629 + AO356_26680 0.33 +0.5 6,075,630 - AO356_26680 0.33 +0.2 6,075,630 - AO356_26680 0.33 -0.5 6,075,701 + AO356_26680 0.43 +0.1 6,075,701 + AO356_26680 0.43 +1.2 6,075,701 + AO356_26680 0.43 +0.2 6,075,702 - AO356_26680 0.44 +0.5 6,075,702 - AO356_26680 0.44 -0.6 6,075,932 + AO356_26680 0.77 -0.6 6,076,086 + +0.2 6,076,192 - +0.4 6,076,212 + +0.3 6,076,212 + +0.1 6,076,212 + +1.4
Or see this region's nucleotide sequence