Experiment: Carbon source D-Mannitol 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_26655 and AO356_26660 are separated by 2 nucleotides AO356_26660 and AO356_26665 overlap by 4 nucleotides AO356_26665 and AO356_26670 are separated by 163 nucleotides
AO356_26655: AO356_26655 - (2Fe-2S)-binding protein, at 6,067,645 to 6,068,145
_26655
AO356_26660: AO356_26660 - carbon monoxide dehydrogenase, at 6,068,148 to 6,068,954
_26660
AO356_26665: AO356_26665 - carbon monoxide dehydrogenase, at 6,068,951 to 6,071,950
_26665
AO356_26670: AO356_26670 - histidine kinase, at 6,072,114 to 6,074,324
_26670
Position (kb)
6068
6069
6070
6071
6072 Strain fitness (log2 ratio)
-1
0
1
2
3 at 6068.413 kb on + strand, within AO356_26660 at 6068.770 kb on + strand, within AO356_26660 at 6068.771 kb on - strand, within AO356_26660 at 6068.771 kb on - strand, within AO356_26660 at 6068.884 kb on + strand at 6069.141 kb on + strand at 6069.142 kb on - strand at 6069.148 kb on - strand at 6069.644 kb on - strand, within AO356_26665 at 6070.171 kb on + strand, within AO356_26665 at 6070.172 kb on - strand, within AO356_26665 at 6070.284 kb on + strand, within AO356_26665 at 6070.539 kb on + strand, within AO356_26665 at 6070.539 kb on + strand, within AO356_26665 at 6070.539 kb on + strand, within AO356_26665 at 6070.540 kb on - strand, within AO356_26665 at 6070.540 kb on - strand, within AO356_26665 at 6070.821 kb on + strand, within AO356_26665 at 6071.002 kb on - strand, within AO356_26665 at 6071.033 kb on + strand, within AO356_26665 at 6071.033 kb on + strand, within AO356_26665 at 6071.304 kb on + strand, within AO356_26665 at 6071.344 kb on - strand, within AO356_26665 at 6071.544 kb on + strand, within AO356_26665 at 6071.625 kb on + strand, within AO356_26665 at 6071.630 kb on + strand, within AO356_26665 at 6071.631 kb on - strand, within AO356_26665 at 6071.816 kb on + strand at 6072.181 kb on + strand at 6072.182 kb on - strand at 6072.290 kb on + strand at 6072.388 kb on + strand, within AO356_26670 at 6072.486 kb on - strand, within AO356_26670 at 6072.561 kb on + strand, within AO356_26670 at 6072.561 kb on + strand, within AO356_26670 at 6072.561 kb on + strand, within AO356_26670 at 6072.561 kb on + strand, within AO356_26670 at 6072.562 kb on - strand, within AO356_26670 at 6072.565 kb on + strand, within AO356_26670 at 6072.566 kb on - strand, within AO356_26670 at 6072.645 kb on + strand, within AO356_26670 at 6072.746 kb on + strand, within AO356_26670 at 6072.817 kb on - strand, within AO356_26670 at 6072.908 kb on - strand, within AO356_26670
Per-strain Table
Position Strand Gene LocusTag Fraction Carbon source D-Mannitol 5 mM remove 6,068,413 + AO356_26660 0.33 -0.5 6,068,770 + AO356_26660 0.77 +1.3 6,068,771 - AO356_26660 0.77 +1.7 6,068,771 - AO356_26660 0.77 -0.0 6,068,884 + -1.3 6,069,141 + +0.1 6,069,142 - -0.6 6,069,148 - +1.1 6,069,644 - AO356_26665 0.23 +0.7 6,070,171 + AO356_26665 0.41 +1.3 6,070,172 - AO356_26665 0.41 -0.4 6,070,284 + AO356_26665 0.44 +1.7 6,070,539 + AO356_26665 0.53 +1.5 6,070,539 + AO356_26665 0.53 +0.1 6,070,539 + AO356_26665 0.53 +0.1 6,070,540 - AO356_26665 0.53 -1.3 6,070,540 - AO356_26665 0.53 +0.5 6,070,821 + AO356_26665 0.62 -0.3 6,071,002 - AO356_26665 0.68 +1.2 6,071,033 + AO356_26665 0.69 -0.0 6,071,033 + AO356_26665 0.69 +0.6 6,071,304 + AO356_26665 0.78 -0.2 6,071,344 - AO356_26665 0.80 -1.5 6,071,544 + AO356_26665 0.86 +0.6 6,071,625 + AO356_26665 0.89 -1.6 6,071,630 + AO356_26665 0.89 -0.2 6,071,631 - AO356_26665 0.89 +0.2 6,071,816 + +0.5 6,072,181 + -0.1 6,072,182 - +0.8 6,072,290 + -1.4 6,072,388 + AO356_26670 0.12 +0.2 6,072,486 - AO356_26670 0.17 +0.6 6,072,561 + AO356_26670 0.20 -0.3 6,072,561 + AO356_26670 0.20 -0.8 6,072,561 + AO356_26670 0.20 +0.5 6,072,561 + AO356_26670 0.20 +1.8 6,072,562 - AO356_26670 0.20 -0.0 6,072,565 + AO356_26670 0.20 +3.0 6,072,566 - AO356_26670 0.20 -0.9 6,072,645 + AO356_26670 0.24 +0.2 6,072,746 + AO356_26670 0.29 -0.3 6,072,817 - AO356_26670 0.32 -0.6 6,072,908 - AO356_26670 0.36 +0.5
Or see this region's nucleotide sequence