Experiment: Carbon source D-Mannitol 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_03485 and AO356_03490 are separated by 61 nucleotides AO356_03490 and AO356_03495 are separated by 4 nucleotides AO356_03495 and AO356_03500 are separated by 183 nucleotides
AO356_03485: AO356_03485 - N-ethylammeline chlorohydrolase, at 777,879 to 779,210
_03485
AO356_03490: AO356_03490 - 3-demethylubiquinone-9 3-methyltransferase, at 779,272 to 779,970
_03490
AO356_03495: AO356_03495 - phosphoglycolate phosphatase, at 779,975 to 780,646
_03495
AO356_03500: AO356_03500 - 3-oxoacyl-ACP reductase, at 780,830 to 781,570
_03500
Position (kb) 779
780
781 Strain fitness (log2 ratio) -2
-1
0
1
2 at 779.040 kb on + strand, within AO356_03485 at 779.040 kb on + strand, within AO356_03485 at 779.040 kb on + strand, within AO356_03485 at 779.041 kb on - strand, within AO356_03485 at 779.065 kb on - strand, within AO356_03485 at 779.968 kb on + strand at 779.968 kb on + strand at 779.968 kb on + strand at 779.968 kb on + strand at 779.968 kb on + strand at 780.207 kb on - strand, within AO356_03495 at 780.536 kb on + strand, within AO356_03495 at 780.537 kb on - strand, within AO356_03495 at 780.537 kb on - strand, within AO356_03495 at 780.542 kb on + strand, within AO356_03495 at 780.543 kb on - strand, within AO356_03495 at 780.812 kb on + strand at 780.813 kb on - strand at 780.813 kb on - strand at 780.830 kb on - strand at 780.839 kb on + strand at 780.839 kb on + strand at 780.948 kb on + strand, within AO356_03500 at 780.989 kb on + strand, within AO356_03500 at 780.989 kb on + strand, within AO356_03500 at 781.067 kb on + strand, within AO356_03500 at 781.067 kb on + strand, within AO356_03500 at 781.068 kb on - strand, within AO356_03500 at 781.068 kb on - strand, within AO356_03500 at 781.150 kb on + strand, within AO356_03500 at 781.150 kb on + strand, within AO356_03500 at 781.313 kb on + strand, within AO356_03500 at 781.313 kb on + strand, within AO356_03500 at 781.508 kb on + strand at 781.508 kb on + strand at 781.508 kb on + strand at 781.515 kb on - strand at 781.568 kb on + strand at 781.568 kb on + strand at 781.569 kb on - strand at 781.569 kb on - strand at 781.569 kb on - strand at 781.569 kb on - strand at 781.593 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Carbon source D-Mannitol 5 mM remove 779,040 + AO356_03485 0.87 +1.2 779,040 + AO356_03485 0.87 +0.1 779,040 + AO356_03485 0.87 +1.2 779,041 - AO356_03485 0.87 +0.8 779,065 - AO356_03485 0.89 +1.2 779,968 + -0.5 779,968 + +0.7 779,968 + +0.1 779,968 + +1.1 779,968 + -0.5 780,207 - AO356_03495 0.35 -2.3 780,536 + AO356_03495 0.83 +0.6 780,537 - AO356_03495 0.84 -0.5 780,537 - AO356_03495 0.84 -1.1 780,542 + AO356_03495 0.84 -1.5 780,543 - AO356_03495 0.85 -0.5 780,812 + +1.5 780,813 - +1.3 780,813 - +0.6 780,830 - -0.1 780,839 + +1.5 780,839 + +2.2 780,948 + AO356_03500 0.16 +2.1 780,989 + AO356_03500 0.21 +0.5 780,989 + AO356_03500 0.21 -0.1 781,067 + AO356_03500 0.32 +0.1 781,067 + AO356_03500 0.32 +2.1 781,068 - AO356_03500 0.32 +0.4 781,068 - AO356_03500 0.32 +0.3 781,150 + AO356_03500 0.43 -0.1 781,150 + AO356_03500 0.43 +1.5 781,313 + AO356_03500 0.65 +1.2 781,313 + AO356_03500 0.65 +0.1 781,508 + -0.3 781,508 + +1.5 781,508 + -0.7 781,515 - +0.1 781,568 + +0.1 781,568 + +0.1 781,569 - +0.6 781,569 - +1.0 781,569 - +0.4 781,569 - -0.7 781,593 + +1.9
Or see this region's nucleotide sequence