Experiment: Dictyostellum sp.mixed culture-2
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS16695 and ABZR87_RS16700 are separated by 12 nucleotides ABZR87_RS16700 and ABZR87_RS16705 overlap by 4 nucleotides
ABZR87_RS16695: ABZR87_RS16695 - MoxR family ATPase, at 93,040 to 94,002
_RS16695
ABZR87_RS16700: ABZR87_RS16700 - DUF58 domain-containing protein, at 94,015 to 95,091
_RS16700
ABZR87_RS16705: ABZR87_RS16705 - DUF3488 and DUF4129 domain-containing transglutaminase family protein, at 95,088 to 97,124
_RS16705
Position (kb) 94
95
96 Strain fitness (log2 ratio) -2
-1
0
1 at 93.075 kb on + strand at 93.231 kb on - strand, within ABZR87_RS16695 at 93.280 kb on + strand, within ABZR87_RS16695 at 93.280 kb on + strand, within ABZR87_RS16695 at 93.281 kb on - strand, within ABZR87_RS16695 at 93.340 kb on + strand, within ABZR87_RS16695 at 93.341 kb on - strand, within ABZR87_RS16695 at 93.493 kb on + strand, within ABZR87_RS16695 at 93.493 kb on + strand, within ABZR87_RS16695 at 93.494 kb on - strand, within ABZR87_RS16695 at 93.494 kb on - strand, within ABZR87_RS16695 at 93.494 kb on - strand, within ABZR87_RS16695 at 93.640 kb on + strand, within ABZR87_RS16695 at 93.640 kb on + strand, within ABZR87_RS16695 at 93.640 kb on + strand, within ABZR87_RS16695 at 93.641 kb on - strand, within ABZR87_RS16695 at 93.751 kb on + strand, within ABZR87_RS16695 at 93.751 kb on + strand, within ABZR87_RS16695 at 93.751 kb on + strand, within ABZR87_RS16695 at 93.751 kb on + strand, within ABZR87_RS16695 at 93.751 kb on + strand, within ABZR87_RS16695 at 93.752 kb on - strand, within ABZR87_RS16695 at 93.752 kb on - strand, within ABZR87_RS16695 at 93.752 kb on - strand, within ABZR87_RS16695 at 94.000 kb on + strand at 94.001 kb on - strand at 94.001 kb on - strand at 94.004 kb on + strand at 94.005 kb on - strand at 94.032 kb on + strand at 94.097 kb on + strand at 94.097 kb on + strand at 94.097 kb on + strand at 94.098 kb on - strand at 94.177 kb on + strand, within ABZR87_RS16700 at 94.177 kb on + strand, within ABZR87_RS16700 at 94.177 kb on + strand, within ABZR87_RS16700 at 94.177 kb on + strand, within ABZR87_RS16700 at 94.177 kb on + strand, within ABZR87_RS16700 at 94.177 kb on + strand, within ABZR87_RS16700 at 94.177 kb on + strand, within ABZR87_RS16700 at 94.178 kb on - strand, within ABZR87_RS16700 at 94.178 kb on - strand, within ABZR87_RS16700 at 94.178 kb on - strand, within ABZR87_RS16700 at 94.178 kb on - strand, within ABZR87_RS16700 at 94.178 kb on - strand, within ABZR87_RS16700 at 94.249 kb on + strand, within ABZR87_RS16700 at 94.249 kb on + strand, within ABZR87_RS16700 at 94.250 kb on - strand, within ABZR87_RS16700 at 94.250 kb on - strand, within ABZR87_RS16700 at 94.250 kb on - strand, within ABZR87_RS16700 at 94.250 kb on - strand, within ABZR87_RS16700 at 94.442 kb on - strand, within ABZR87_RS16700 at 94.603 kb on + strand, within ABZR87_RS16700 at 94.603 kb on + strand, within ABZR87_RS16700 at 94.603 kb on + strand, within ABZR87_RS16700 at 94.604 kb on - strand, within ABZR87_RS16700 at 94.634 kb on - strand, within ABZR87_RS16700 at 94.756 kb on + strand, within ABZR87_RS16700 at 94.756 kb on + strand, within ABZR87_RS16700 at 94.756 kb on + strand, within ABZR87_RS16700 at 94.757 kb on - strand, within ABZR87_RS16700 at 94.757 kb on - strand, within ABZR87_RS16700 at 94.969 kb on + strand, within ABZR87_RS16700 at 95.463 kb on - strand, within ABZR87_RS16705 at 95.463 kb on - strand, within ABZR87_RS16705 at 95.695 kb on + strand, within ABZR87_RS16705 at 95.835 kb on - strand, within ABZR87_RS16705 at 95.835 kb on - strand, within ABZR87_RS16705 at 95.841 kb on + strand, within ABZR87_RS16705 at 95.842 kb on - strand, within ABZR87_RS16705 at 95.842 kb on - strand, within ABZR87_RS16705 at 95.842 kb on - strand, within ABZR87_RS16705 at 95.842 kb on - strand, within ABZR87_RS16705 at 95.973 kb on + strand, within ABZR87_RS16705 at 95.973 kb on + strand, within ABZR87_RS16705 at 95.973 kb on + strand, within ABZR87_RS16705 at 95.974 kb on - strand, within ABZR87_RS16705
Per-strain Table
Position Strand Gene LocusTag Fraction Dictyostellum sp.mixed culture-2 remove 93,075 + +0.5 93,231 - ABZR87_RS16695 0.20 -0.4 93,280 + ABZR87_RS16695 0.25 -0.1 93,280 + ABZR87_RS16695 0.25 -0.3 93,281 - ABZR87_RS16695 0.25 -0.1 93,340 + ABZR87_RS16695 0.31 -0.3 93,341 - ABZR87_RS16695 0.31 -0.1 93,493 + ABZR87_RS16695 0.47 +0.3 93,493 + ABZR87_RS16695 0.47 +0.0 93,494 - ABZR87_RS16695 0.47 -0.2 93,494 - ABZR87_RS16695 0.47 -0.7 93,494 - ABZR87_RS16695 0.47 -0.7 93,640 + ABZR87_RS16695 0.62 +0.9 93,640 + ABZR87_RS16695 0.62 +0.0 93,640 + ABZR87_RS16695 0.62 -0.5 93,641 - ABZR87_RS16695 0.62 -0.8 93,751 + ABZR87_RS16695 0.74 -1.8 93,751 + ABZR87_RS16695 0.74 -1.2 93,751 + ABZR87_RS16695 0.74 -0.4 93,751 + ABZR87_RS16695 0.74 +0.6 93,751 + ABZR87_RS16695 0.74 +0.3 93,752 - ABZR87_RS16695 0.74 -0.1 93,752 - ABZR87_RS16695 0.74 -0.4 93,752 - ABZR87_RS16695 0.74 -2.3 94,000 + +1.6 94,001 - -0.2 94,001 - -0.1 94,004 + -1.6 94,005 - -0.6 94,032 + +0.1 94,097 + +0.2 94,097 + +0.3 94,097 + +0.8 94,098 - -0.9 94,177 + ABZR87_RS16700 0.15 +1.4 94,177 + ABZR87_RS16700 0.15 -1.8 94,177 + ABZR87_RS16700 0.15 +0.8 94,177 + ABZR87_RS16700 0.15 +0.0 94,177 + ABZR87_RS16700 0.15 +0.1 94,177 + ABZR87_RS16700 0.15 +0.2 94,177 + ABZR87_RS16700 0.15 +0.3 94,178 - ABZR87_RS16700 0.15 -0.1 94,178 - ABZR87_RS16700 0.15 +0.2 94,178 - ABZR87_RS16700 0.15 +0.1 94,178 - ABZR87_RS16700 0.15 -0.3 94,178 - ABZR87_RS16700 0.15 -0.0 94,249 + ABZR87_RS16700 0.22 +0.1 94,249 + ABZR87_RS16700 0.22 -1.4 94,250 - ABZR87_RS16700 0.22 -0.1 94,250 - ABZR87_RS16700 0.22 -0.8 94,250 - ABZR87_RS16700 0.22 -0.5 94,250 - ABZR87_RS16700 0.22 +0.1 94,442 - ABZR87_RS16700 0.40 -0.4 94,603 + ABZR87_RS16700 0.55 -1.4 94,603 + ABZR87_RS16700 0.55 +0.4 94,603 + ABZR87_RS16700 0.55 +1.1 94,604 - ABZR87_RS16700 0.55 +0.1 94,634 - ABZR87_RS16700 0.57 +1.2 94,756 + ABZR87_RS16700 0.69 +0.4 94,756 + ABZR87_RS16700 0.69 -0.2 94,756 + ABZR87_RS16700 0.69 +0.7 94,757 - ABZR87_RS16700 0.69 +0.6 94,757 - ABZR87_RS16700 0.69 +0.6 94,969 + ABZR87_RS16700 0.89 -0.3 95,463 - ABZR87_RS16705 0.18 -0.0 95,463 - ABZR87_RS16705 0.18 +0.4 95,695 + ABZR87_RS16705 0.30 +0.1 95,835 - ABZR87_RS16705 0.37 -1.1 95,835 - ABZR87_RS16705 0.37 -0.0 95,841 + ABZR87_RS16705 0.37 -2.4 95,842 - ABZR87_RS16705 0.37 -0.7 95,842 - ABZR87_RS16705 0.37 -0.0 95,842 - ABZR87_RS16705 0.37 -0.1 95,842 - ABZR87_RS16705 0.37 -0.2 95,973 + ABZR87_RS16705 0.43 +0.4 95,973 + ABZR87_RS16705 0.43 -1.3 95,973 + ABZR87_RS16705 0.43 -1.8 95,974 - ABZR87_RS16705 0.43 -0.3
Or see this region's nucleotide sequence