Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS15885

Experiment: Dictyostellum sp.mixed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dictyostellum sp.mixed culture-2
3,359,012	+		ABZR87_RS15880	0.84	+0.3
3,359,013	-		ABZR87_RS15880	0.84	-1.9
3,359,013	-		ABZR87_RS15880	0.84	-0.7
3,359,084	+		ABZR87_RS15880	0.87	-1.3
3,359,084	+		ABZR87_RS15880	0.87	-0.6
3,359,084	+		ABZR87_RS15880	0.87	-0.6
3,359,084	+		ABZR87_RS15880	0.87	-0.6
3,359,084	+		ABZR87_RS15880	0.87	-0.1
3,359,084	+		ABZR87_RS15880	0.87	-0.1
3,359,085	-		ABZR87_RS15880	0.87	-0.7
3,359,085	-		ABZR87_RS15880	0.87	-0.8
3,359,085	-		ABZR87_RS15880	0.87	-0.1
3,359,085	-		ABZR87_RS15880	0.87	-0.7
3,359,085	-		ABZR87_RS15880	0.87	-1.4
3,359,085	-		ABZR87_RS15880	0.87	-1.9
3,359,330	+				-1.0
3,359,330	+				-0.6
3,359,330	+				+0.1
3,359,333	+				-2.8
3,359,333	+				-0.5
3,359,334	-				-1.9
3,359,334	-				+0.8
3,359,425	+				-0.3
3,359,425	+				-0.4
3,359,425	+				-1.1
3,359,425	+				+0.8
3,359,425	+				-1.8
3,359,425	+				-1.1
3,359,425	+				-0.3
3,359,425	+				-0.3
3,359,425	+				-0.5
3,359,425	+				-1.0
3,359,425	+				-0.8
3,359,425	+				-1.0
3,359,425	+				-0.8
3,359,425	+				-0.0
3,359,425	+				+0.2
3,359,425	+				-1.0
3,359,425	+				-0.4
3,359,425	+				-0.1
3,359,425	+				-0.5
3,359,425	+				+0.3
3,359,425	+				-0.1
3,359,425	+				-0.6
3,359,425	+				-0.6
3,359,426	-				+0.2
3,359,426	-				-0.3
3,359,426	-				-1.4
3,359,426	-				-1.4
3,359,426	-				+0.5
3,359,426	-				-0.3
3,359,426	-				-0.7
3,359,426	-				-0.5
3,359,426	-				-0.8
3,359,426	-				-0.2
3,359,426	-				-1.1
3,359,426	-				-0.5
3,359,426	-				-1.3
3,359,426	-				-1.5
3,359,426	-				-2.0
3,359,426	-				-0.3
3,359,426	-				-1.5
3,359,426	-				-0.3
3,359,426	-				+0.2
3,359,426	-				-1.1
3,359,426	-				-0.9
3,359,426	-				-0.9
3,359,443	+				-0.6
3,359,443	+				-1.5
3,359,444	-				-0.6
3,359,444	-				-1.8
3,359,444	-				+0.2
3,359,481	+				+0.4
3,359,481	+				-0.3
3,359,482	-				-0.6
3,359,482	-				-1.7
3,359,532	+				+0.3
3,359,532	+				-0.9
3,359,533	-				-1.9
3,359,533	-				+1.3
3,359,533	-				-1.5
3,359,543	+				+0.5
3,359,543	+				-1.7
3,359,543	+				-0.7
3,359,544	-				+0.7
3,359,559	+				-1.5
3,359,559	+				-0.6
3,359,559	+				-1.4
3,359,559	+				-0.9
3,359,559	+				-0.6
3,359,560	-				+0.0
3,359,560	-				+1.2
3,359,560	-				+0.5
3,359,598	+				+0.9
3,359,598	+				-1.0
3,359,598	+				+1.6
3,359,598	+				-0.8
3,359,599	-				+0.9
3,359,599	-				-0.7
3,359,677	+				+0.4
3,359,677	+				-0.0
3,359,689	+				-0.2
3,359,689	+				-1.7
3,359,689	+				-0.8
3,359,689	+				-0.3
3,359,689	+				-2.1
3,359,689	+				+2.1
3,359,689	+				-0.5
3,359,689	+				-0.8
3,359,689	+				+0.5
3,359,690	-				+1.5
3,359,690	-				+0.3
3,359,690	-				+1.4
3,359,690	-				+0.5
3,359,708	+				-1.0
3,359,708	+				-1.2
3,359,709	-				+0.1
3,359,709	-				-0.5
3,359,727	-				-1.2
3,359,772	+				-1.6
3,359,772	+				+1.5
3,359,772	+				-0.4
3,359,773	-				+0.2
3,359,773	-				+0.3
3,359,773	-				+0.7
3,359,773	-				-0.7
3,359,776	+				-0.7
3,359,776	+				-0.2
3,359,776	+				-0.7
3,359,776	+				-0.2
3,359,776	+				-1.1
3,359,776	+				+0.8
3,359,777	-				+0.0
3,359,777	-				+0.3
3,359,777	-				+1.3
3,359,777	-				+0.1
3,359,777	-				+0.1
3,359,777	-				-0.6
3,359,777	-				+0.0
3,359,777	-				-0.4
3,359,789	+				+0.2
3,359,789	+				+0.2
3,359,789	+				+0.4
3,359,790	-				+0.3
3,359,790	-				-0.7
3,360,096	+		ABZR87_RS15885	0.13	+0.2
3,360,097	-		ABZR87_RS15885	0.13	+1.0
3,360,304	+		ABZR87_RS15885	0.28	-0.1
3,360,304	+		ABZR87_RS15885	0.28	+0.3
3,360,305	-		ABZR87_RS15885	0.29	-0.1
3,360,593	-		ABZR87_RS15885	0.50	+0.1
3,360,593	-		ABZR87_RS15885	0.50	+0.3
3,360,593	-		ABZR87_RS15885	0.50	-0.0
3,360,659	-		ABZR87_RS15885	0.55	-1.9
3,360,775	+		ABZR87_RS15885	0.64	-1.8
3,360,776	-		ABZR87_RS15885	0.64	+0.0
3,360,776	-		ABZR87_RS15885	0.64	-0.1
3,360,776	-		ABZR87_RS15885	0.64	-0.4
3,360,877	+		ABZR87_RS15885	0.72	-0.4
3,360,944	-		ABZR87_RS15885	0.77	-0.1
3,360,944	-		ABZR87_RS15885	0.77	+0.9
3,361,093	+		ABZR87_RS15885	0.88	+0.4
3,361,093	+		ABZR87_RS15885	0.88	-1.5
3,361,094	-		ABZR87_RS15885	0.88	+0.3
3,361,094	-		ABZR87_RS15885	0.88	+0.3
3,361,094	-		ABZR87_RS15885	0.88	+0.6
3,361,094	-		ABZR87_RS15885	0.88	-0.3
3,361,094	-		ABZR87_RS15885	0.88	+0.3
3,361,094	-		ABZR87_RS15885	0.88	+0.3
3,361,149	+				-0.1
3,361,150	-				-1.0
3,361,150	-				-0.5
3,361,150	-				+0.1
3,361,150	-				+0.1
3,361,150	-				-0.2
3,361,150	-				-0.1
3,361,303	+		ABZR87_RS15890	0.25	+1.1
3,361,303	+		ABZR87_RS15890	0.25	+0.0
3,361,304	-		ABZR87_RS15890	0.25	+0.7
3,361,304	-		ABZR87_RS15890	0.25	+0.0
3,361,304	-		ABZR87_RS15890	0.25	+0.9
3,361,305	+		ABZR87_RS15890	0.25	+0.0
3,361,305	+		ABZR87_RS15890	0.25	-1.2
3,361,306	-		ABZR87_RS15890	0.26	-0.3
3,361,468	+		ABZR87_RS15890	0.60	+0.3
3,361,468	+		ABZR87_RS15890	0.60	+0.8
3,361,468	+		ABZR87_RS15890	0.60	+0.0
3,361,469	-		ABZR87_RS15890	0.60	+0.5
3,361,469	-		ABZR87_RS15890	0.60	-1.0
3,361,469	-		ABZR87_RS15890	0.60	+0.3
3,361,469	-		ABZR87_RS15890	0.60	+0.4
3,361,469	-		ABZR87_RS15890	0.60	-0.7
3,361,498	+		ABZR87_RS15890	0.66	-0.1
3,361,499	-		ABZR87_RS15890	0.67	+0.9
3,361,499	-		ABZR87_RS15890	0.67	+0.2
3,361,594	+				-2.1
3,361,782	-		ABZR87_RS15895	0.39	-1.0
3,361,926	-		ABZR87_RS15895	0.64	+2.7
3,362,063	+		ABZR87_RS15895	0.88	+0.9
3,362,063	+		ABZR87_RS15895	0.88	+0.0
3,362,063	+		ABZR87_RS15895	0.88	-0.8
3,362,064	-		ABZR87_RS15895	0.88	-0.1
3,362,064	-		ABZR87_RS15895	0.88	+0.9
3,362,064	-		ABZR87_RS15895	0.88	-0.5
3,362,064	-		ABZR87_RS15895	0.88	+0.4
3,362,076	+				+0.7
3,362,076	+				-0.2
3,362,076	+				+0.2
3,362,077	-				+0.8
3,362,077	-				-0.6
3,362,077	-				+1.2
3,362,077	-				+1.0
3,362,077	-				+0.4
3,362,144	+				+0.1
3,362,144	+				-0.2
3,362,145	-				-0.3
3,362,151	+				-3.3
3,362,163	+				-0.1
3,362,163	+				-1.3
3,362,163	+				-0.1
3,362,164	-				-0.6