Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS15385

Experiment: Dictyostellum sp.mixed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dictyostellum sp.mixed culture-2
3,236,554	+				-1.2
3,236,569	+				-0.7
3,236,569	+				-1.6
3,236,569	+				+0.7
3,236,570	-				-1.8
3,236,570	-				-0.9
3,236,588	-				+2.0
3,236,737	-		ABZR87_RS15380	0.19	+0.8
3,237,400	+				-0.4
3,237,401	-				+0.8
3,237,628	+		ABZR87_RS15385	0.22	+0.4
3,237,661	-		ABZR87_RS15385	0.25	+0.5
3,237,661	-		ABZR87_RS15385	0.25	+1.4
3,237,718	+		ABZR87_RS15385	0.32	+0.6
3,237,747	+		ABZR87_RS15385	0.35	-0.3
3,237,748	-		ABZR87_RS15385	0.35	+2.5
3,237,804	+		ABZR87_RS15385	0.41	-0.6
3,237,804	+		ABZR87_RS15385	0.41	-1.3
3,237,805	-		ABZR87_RS15385	0.41	+0.5
3,237,805	-		ABZR87_RS15385	0.41	-1.9
3,237,805	-		ABZR87_RS15385	0.41	+0.1
3,237,805	-		ABZR87_RS15385	0.41	+2.2
3,237,805	-		ABZR87_RS15385	0.41	+1.2
3,237,808	+		ABZR87_RS15385	0.41	-0.7
3,237,808	+		ABZR87_RS15385	0.41	+1.7
3,237,808	+		ABZR87_RS15385	0.41	-2.8
3,237,809	-		ABZR87_RS15385	0.42	+1.5
3,237,809	-		ABZR87_RS15385	0.42	-0.1
3,237,809	-		ABZR87_RS15385	0.42	+1.6
3,237,809	-		ABZR87_RS15385	0.42	+1.5
3,237,809	-		ABZR87_RS15385	0.42	+0.4
3,237,813	+		ABZR87_RS15385	0.42	-0.3
3,237,813	+		ABZR87_RS15385	0.42	-1.0
3,237,814	-		ABZR87_RS15385	0.42	+1.5
3,237,814	-		ABZR87_RS15385	0.42	+0.4
3,237,814	-		ABZR87_RS15385	0.42	+1.2
3,237,814	-		ABZR87_RS15385	0.42	-0.2
3,237,814	-		ABZR87_RS15385	0.42	+0.6
3,237,814	-		ABZR87_RS15385	0.42	+0.8
3,237,909	+		ABZR87_RS15385	0.52	+0.2
3,237,909	+		ABZR87_RS15385	0.52	-0.4
3,237,909	+		ABZR87_RS15385	0.52	+0.2
3,237,909	+		ABZR87_RS15385	0.52	+1.2
3,237,910	-		ABZR87_RS15385	0.53	-0.1
3,238,032	+		ABZR87_RS15385	0.66	-2.2
3,238,032	+		ABZR87_RS15385	0.66	-0.8
3,238,032	+		ABZR87_RS15385	0.66	-1.2
3,238,032	+		ABZR87_RS15385	0.66	-0.4
3,238,033	-		ABZR87_RS15385	0.66	+0.3
3,238,033	-		ABZR87_RS15385	0.66	+1.6
3,238,068	+		ABZR87_RS15385	0.70	-1.2
3,238,068	+		ABZR87_RS15385	0.70	-0.7
3,238,068	+		ABZR87_RS15385	0.70	+0.2
3,238,068	+		ABZR87_RS15385	0.70	-0.3
3,238,068	+		ABZR87_RS15385	0.70	-1.1
3,238,069	-		ABZR87_RS15385	0.70	+0.8
3,238,069	-		ABZR87_RS15385	0.70	+0.9
3,238,069	-		ABZR87_RS15385	0.70	+0.9
3,238,069	-		ABZR87_RS15385	0.70	+0.7
3,238,069	-		ABZR87_RS15385	0.70	+0.4
3,238,069	-		ABZR87_RS15385	0.70	+1.9
3,238,069	-		ABZR87_RS15385	0.70	+0.0
3,238,071	+		ABZR87_RS15385	0.70	-1.3
3,238,071	+		ABZR87_RS15385	0.70	-0.7
3,238,224	+		ABZR87_RS15385	0.87	+0.5
3,238,224	+		ABZR87_RS15385	0.87	-0.5
3,238,224	+		ABZR87_RS15385	0.87	-0.4
3,238,225	-		ABZR87_RS15385	0.87	+0.3
3,238,225	-		ABZR87_RS15385	0.87	+1.2
3,238,225	-		ABZR87_RS15385	0.87	+1.3
3,238,225	-		ABZR87_RS15385	0.87	+1.2
3,238,225	-		ABZR87_RS15385	0.87	+0.9
3,238,225	-		ABZR87_RS15385	0.87	+0.9
3,238,225	-		ABZR87_RS15385	0.87	+0.8
3,238,395	+				+0.6
3,238,476	+				-0.5
3,238,476	+				+1.2
3,238,477	-				-0.0
3,238,477	-				+1.2
3,238,499	+				+0.4
3,238,503	+				-0.5
3,238,503	+				-0.1
3,238,503	+				+0.1
3,238,504	-				+0.5
3,238,504	-				+0.8
3,238,504	-				+1.6
3,238,650	+				-0.3
3,238,651	-				+0.3
3,238,692	+		ABZR87_RS15390	0.11	-0.1
3,238,692	+		ABZR87_RS15390	0.11	+1.2
3,238,692	+		ABZR87_RS15390	0.11	-0.4
3,238,692	+		ABZR87_RS15390	0.11	+0.4
3,238,692	+		ABZR87_RS15390	0.11	-0.5
3,238,693	-		ABZR87_RS15390	0.11	+0.3
3,238,693	-		ABZR87_RS15390	0.11	-0.6
3,238,693	-		ABZR87_RS15390	0.11	-0.7
3,238,693	-		ABZR87_RS15390	0.11	+0.5
3,238,693	-		ABZR87_RS15390	0.11	+0.7
3,238,815	+		ABZR87_RS15390	0.19	-0.1
3,238,816	-		ABZR87_RS15390	0.19	-0.3
3,238,816	-		ABZR87_RS15390	0.19	-0.4
3,238,947	+		ABZR87_RS15390	0.28	-1.6
3,238,947	+		ABZR87_RS15390	0.28	+0.8
3,238,947	+		ABZR87_RS15390	0.28	-0.0
3,238,947	+		ABZR87_RS15390	0.28	+1.0
3,238,947	+		ABZR87_RS15390	0.28	+1.0
3,238,948	-		ABZR87_RS15390	0.28	-1.0
3,238,948	-		ABZR87_RS15390	0.28	-0.2
3,238,948	-		ABZR87_RS15390	0.28	+0.4
3,239,157	+		ABZR87_RS15390	0.42	-0.5
3,239,158	-		ABZR87_RS15390	0.42	-0.6
3,239,158	-		ABZR87_RS15390	0.42	+1.0
3,239,158	-		ABZR87_RS15390	0.42	+0.6
3,239,158	-		ABZR87_RS15390	0.42	+0.1
3,239,158	-		ABZR87_RS15390	0.42	-0.7
3,239,158	-		ABZR87_RS15390	0.42	-0.3
3,239,158	-		ABZR87_RS15390	0.42	+0.1
3,239,158	-		ABZR87_RS15390	0.42	-0.2
3,239,277	+		ABZR87_RS15390	0.51	+0.5