Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS13310

Experiment: Dictyostellum sp.mixed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dictyostellum sp.mixed culture-2
2,820,965	+		ABZR87_RS13300	0.78	-1.7
2,820,982	+		ABZR87_RS13300	0.79	+0.3
2,820,982	+		ABZR87_RS13300	0.79	-0.4
2,820,983	-		ABZR87_RS13300	0.79	-0.3
2,820,983	-		ABZR87_RS13300	0.79	+0.3
2,820,983	-		ABZR87_RS13300	0.79	-2.0
2,820,997	+		ABZR87_RS13300	0.79	-0.9
2,820,998	-		ABZR87_RS13300	0.80	-1.0
2,821,003	+		ABZR87_RS13300	0.80	-1.2
2,821,118	-		ABZR87_RS13300	0.86	-2.0
2,821,286	+				-1.0
2,821,287	-				-0.9
2,821,328	+				-0.3
2,821,329	-				-1.4
2,821,329	-				-2.2
2,821,364	+				-2.5
2,821,365	-				-0.2
2,821,420	+				-0.5
2,821,421	-				+0.5
2,821,421	-				+0.3
2,821,421	-				+0.8
2,821,424	-				+0.5
2,821,471	+				-0.3
2,821,472	-				+0.6
2,821,548	+				-0.9
2,821,549	-				-0.0
2,821,583	-				+0.9
2,821,637	-				+0.7
2,821,638	+				+0.7
2,821,638	+				-0.4
2,821,638	+				+0.6
2,821,638	+				+0.4
2,821,638	+				-0.0
2,821,638	+				+0.9
2,821,638	+				+0.4
2,821,638	+				-0.7
2,821,638	+				+0.4
2,821,638	+				-0.0
2,821,638	+				+0.8
2,821,638	+				+0.1
2,821,638	+				-2.0
2,821,638	+				+1.5
2,821,638	+				-0.8
2,821,638	+				+0.3
2,821,638	+				-1.2
2,821,638	+				+0.1
2,821,638	+				+0.3
2,821,639	-				+0.3
2,821,639	-				-0.4
2,821,639	-				-0.6
2,821,639	-				+0.0
2,821,639	-				-1.1
2,821,639	-				+0.1
2,821,639	-				+0.4
2,821,639	-				-1.0
2,821,639	-				-0.0
2,821,639	-				+0.2
2,821,639	-				+0.8
2,821,639	-				+0.6
2,821,639	-				-0.1
2,821,639	-				-1.1
2,821,639	-				+0.6
2,821,639	-				+1.1
2,821,639	-				+0.4
2,821,639	-				-0.3
2,821,639	-				+0.7
2,821,640	+				-0.6
2,821,640	+				+0.9
2,821,640	+				+0.2
2,821,640	+				-1.2
2,821,640	+				-0.6
2,821,640	+				+0.1
2,821,641	-				+0.1
2,821,662	+		ABZR87_RS13305	0.11	-0.3
2,821,663	-		ABZR87_RS13305	0.12	-0.8
2,821,663	-		ABZR87_RS13305	0.12	+0.1
2,821,729	-		ABZR87_RS13305	0.40	+0.2
2,821,729	-		ABZR87_RS13305	0.40	-1.3
2,821,729	-		ABZR87_RS13305	0.40	-1.2
2,821,729	-		ABZR87_RS13305	0.40	-1.2
2,821,744	+		ABZR87_RS13305	0.46	-0.3
2,821,745	-		ABZR87_RS13305	0.46	+0.1
2,821,745	-		ABZR87_RS13305	0.46	+0.2
2,821,931	+				+0.6
2,821,932	-				-0.3
2,821,937	+				-0.5
2,821,938	-				+2.3
2,821,938	-				-1.0
2,821,938	-				-0.8
2,821,938	-				-1.2
2,821,980	-		ABZR87_RS13310	0.13	-0.3
2,821,980	-		ABZR87_RS13310	0.13	-0.2
2,821,989	+		ABZR87_RS13310	0.14	-0.7
2,822,027	+		ABZR87_RS13310	0.19	-0.1
2,822,027	+		ABZR87_RS13310	0.19	-1.5
2,822,027	+		ABZR87_RS13310	0.19	-0.2
2,822,028	-		ABZR87_RS13310	0.19	-3.8
2,822,028	-		ABZR87_RS13310	0.19	-1.3
2,822,028	-		ABZR87_RS13310	0.19	-1.0
2,822,028	-		ABZR87_RS13310	0.19	-0.2
2,822,028	-		ABZR87_RS13310	0.19	-1.8
2,822,028	-		ABZR87_RS13310	0.19	-1.5
2,822,115	+		ABZR87_RS13310	0.30	-1.0
2,822,115	+		ABZR87_RS13310	0.30	+0.6
2,822,116	-		ABZR87_RS13310	0.30	-0.3
2,822,266	+		ABZR87_RS13310	0.48	+0.3
2,822,266	+		ABZR87_RS13310	0.48	+0.3
2,822,266	+		ABZR87_RS13310	0.48	-0.6
2,822,266	+		ABZR87_RS13310	0.48	-0.3
2,822,412	+		ABZR87_RS13310	0.66	+0.6
2,822,412	+		ABZR87_RS13310	0.66	-0.8
2,822,413	-		ABZR87_RS13310	0.66	-0.5
2,822,413	-		ABZR87_RS13310	0.66	-1.0
2,822,482	+		ABZR87_RS13310	0.75	-1.0
2,822,483	-		ABZR87_RS13310	0.75	-0.2
2,822,578	+		ABZR87_RS13310	0.87	-0.4
2,822,579	-		ABZR87_RS13310	0.87	-2.0
2,822,586	-		ABZR87_RS13310	0.88	-0.2
2,822,789	+		ABZR87_RS13315	0.11	+0.2
2,822,790	-		ABZR87_RS13315	0.11	-0.3
2,822,872	+		ABZR87_RS13315	0.18	-0.1
2,822,872	+		ABZR87_RS13315	0.18	+0.4
2,822,872	+		ABZR87_RS13315	0.18	-0.2
2,822,872	+		ABZR87_RS13315	0.18	-1.5
2,822,873	-		ABZR87_RS13315	0.18	+1.7
2,822,873	-		ABZR87_RS13315	0.18	-0.6
2,822,874	+		ABZR87_RS13315	0.18	-0.4
2,822,874	+		ABZR87_RS13315	0.18	-0.7
2,822,874	+		ABZR87_RS13315	0.18	-0.4
2,822,874	+		ABZR87_RS13315	0.18	+0.1
2,822,875	-		ABZR87_RS13315	0.19	-0.6
2,823,138	+		ABZR87_RS13315	0.42	-1.4
2,823,138	+		ABZR87_RS13315	0.42	-0.3
2,823,139	-		ABZR87_RS13315	0.42	+0.4
2,823,139	-		ABZR87_RS13315	0.42	-0.5
2,823,154	+		ABZR87_RS13315	0.44	+0.5
2,823,154	+		ABZR87_RS13315	0.44	-0.2
2,823,154	+		ABZR87_RS13315	0.44	-0.8
2,823,154	+		ABZR87_RS13315	0.44	-0.2
2,823,155	-		ABZR87_RS13315	0.44	+0.2
2,823,155	-		ABZR87_RS13315	0.44	-0.5
2,823,269	+		ABZR87_RS13315	0.54	-0.2
2,823,270	-		ABZR87_RS13315	0.54	+0.3
2,823,388	-		ABZR87_RS13315	0.65	+1.3
2,823,558	+		ABZR87_RS13315	0.80	-0.5