Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS12595

Experiment: Dictyostellum sp.mixed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dictyostellum sp.mixed culture-2
2,666,939	+		ABZR87_RS12590	0.49	-0.4
2,666,939	+		ABZR87_RS12590	0.49	-0.1
2,666,939	+		ABZR87_RS12590	0.49	-0.1
2,666,939	+		ABZR87_RS12590	0.49	+0.4
2,666,940	-		ABZR87_RS12590	0.49	+0.4
2,666,940	-		ABZR87_RS12590	0.49	-0.7
2,666,940	-		ABZR87_RS12590	0.49	+0.6
2,666,940	-		ABZR87_RS12590	0.49	-1.2
2,666,940	-		ABZR87_RS12590	0.49	+0.6
2,666,940	-		ABZR87_RS12590	0.49	-0.9
2,666,940	-		ABZR87_RS12590	0.49	-2.1
2,666,940	-		ABZR87_RS12590	0.49	+0.3
2,666,979	-		ABZR87_RS12590	0.52	-1.1
2,667,131	+		ABZR87_RS12590	0.62	-0.1
2,667,131	+		ABZR87_RS12590	0.62	-1.0
2,667,131	+		ABZR87_RS12590	0.62	+0.3
2,667,131	+		ABZR87_RS12590	0.62	+0.6
2,667,131	+		ABZR87_RS12590	0.62	+0.2
2,667,131	+		ABZR87_RS12590	0.62	+0.5
2,667,131	+		ABZR87_RS12590	0.62	-0.4
2,667,131	+		ABZR87_RS12590	0.62	-0.1
2,667,131	+		ABZR87_RS12590	0.62	-1.4
2,667,131	+		ABZR87_RS12590	0.62	-0.5
2,667,131	+		ABZR87_RS12590	0.62	-0.2
2,667,131	+		ABZR87_RS12590	0.62	+0.0
2,667,132	-		ABZR87_RS12590	0.62	-1.4
2,667,132	-		ABZR87_RS12590	0.62	-0.1
2,667,132	-		ABZR87_RS12590	0.62	-0.0
2,667,132	-		ABZR87_RS12590	0.62	+0.2
2,667,132	-		ABZR87_RS12590	0.62	-1.7
2,667,132	-		ABZR87_RS12590	0.62	-1.0
2,667,132	-		ABZR87_RS12590	0.62	-0.4
2,667,132	-		ABZR87_RS12590	0.62	-0.6
2,667,132	-		ABZR87_RS12590	0.62	-0.1
2,667,132	-		ABZR87_RS12590	0.62	-0.6
2,667,132	-		ABZR87_RS12590	0.62	-0.7
2,667,132	-		ABZR87_RS12590	0.62	-2.2
2,667,132	-		ABZR87_RS12590	0.62	-0.9
2,667,132	-		ABZR87_RS12590	0.62	+0.0
2,667,132	-		ABZR87_RS12590	0.62	+0.3
2,667,132	-		ABZR87_RS12590	0.62	-0.4
2,667,132	-		ABZR87_RS12590	0.62	+1.4
2,667,132	-		ABZR87_RS12590	0.62	+2.9
2,667,152	+		ABZR87_RS12590	0.63	-0.7
2,667,275	+		ABZR87_RS12590	0.71	-2.1
2,667,275	+		ABZR87_RS12590	0.71	-0.7
2,667,276	-		ABZR87_RS12590	0.71	+0.9
2,667,276	-		ABZR87_RS12590	0.71	+0.3
2,667,276	-		ABZR87_RS12590	0.71	+0.0
2,667,294	-		ABZR87_RS12590	0.73	+1.4
2,667,294	-		ABZR87_RS12590	0.73	+0.1
2,667,310	+		ABZR87_RS12590	0.74	+0.6
2,667,310	+		ABZR87_RS12590	0.74	-0.9
2,667,310	+		ABZR87_RS12590	0.74	-0.7
2,667,310	+		ABZR87_RS12590	0.74	-0.1
2,667,311	-		ABZR87_RS12590	0.74	+0.1
2,667,311	-		ABZR87_RS12590	0.74	+0.6
2,667,311	-		ABZR87_RS12590	0.74	-0.5
2,667,437	+		ABZR87_RS12590	0.82	+0.3
2,667,491	+		ABZR87_RS12590	0.85	+0.2
2,667,491	+		ABZR87_RS12590	0.85	+1.6
2,667,543	-		ABZR87_RS12590	0.89	-0.2
2,667,543	-		ABZR87_RS12590	0.89	-2.1
2,667,543	-		ABZR87_RS12590	0.89	+1.0
2,667,614	+				-0.4
2,667,713	+				+0.4
2,667,713	+				+0.3
2,667,713	+				+0.5
2,667,714	-				-0.6
2,667,714	-				+0.1
2,667,714	-				-1.0
2,667,714	-				-0.3
2,667,717	+				-0.1
2,667,717	+				-0.3
2,667,717	+				-0.7
2,667,718	-				+0.9
2,667,718	-				-0.4
2,667,799	+				-0.7
2,667,799	+				+1.1
2,667,799	+				-0.6
2,667,799	+				+0.7
2,667,799	+				-0.0
2,667,800	-				-2.1
2,667,800	-				-1.0
2,667,800	-				-0.0
2,667,800	-				-1.8
2,667,800	-				-0.1
2,667,800	-				-0.6
2,667,800	-				-0.3
2,667,800	-				-1.9
2,667,966	-		ABZR87_RS12595	0.11	-0.7
2,667,966	-		ABZR87_RS12595	0.11	-0.5
2,667,966	-		ABZR87_RS12595	0.11	-0.3
2,667,966	-		ABZR87_RS12595	0.11	-0.8
2,668,055	+		ABZR87_RS12595	0.17	-0.7
2,668,055	+		ABZR87_RS12595	0.17	+0.5
2,668,055	+		ABZR87_RS12595	0.17	-0.6
2,668,067	+		ABZR87_RS12595	0.18	-0.4
2,668,067	+		ABZR87_RS12595	0.18	-1.2
2,668,067	+		ABZR87_RS12595	0.18	-0.3
2,668,067	+		ABZR87_RS12595	0.18	-0.1
2,668,067	+		ABZR87_RS12595	0.18	+0.1
2,668,067	+		ABZR87_RS12595	0.18	+0.0
2,668,106	+		ABZR87_RS12595	0.20	+0.8
2,668,169	+		ABZR87_RS12595	0.25	-0.7
2,668,170	-		ABZR87_RS12595	0.25	-0.6
2,668,170	-		ABZR87_RS12595	0.25	-0.2
2,668,170	-		ABZR87_RS12595	0.25	-0.2
2,668,170	-		ABZR87_RS12595	0.25	+0.8
2,668,271	+		ABZR87_RS12595	0.31	-1.3
2,668,271	+		ABZR87_RS12595	0.31	-1.4
2,668,432	-		ABZR87_RS12595	0.42	-0.0
2,668,559	+		ABZR87_RS12595	0.50	-0.0
2,668,559	+		ABZR87_RS12595	0.50	-0.2
2,668,559	+		ABZR87_RS12595	0.50	-0.0
2,668,559	+		ABZR87_RS12595	0.50	-0.5
2,668,560	-		ABZR87_RS12595	0.50	-0.3
2,668,560	-		ABZR87_RS12595	0.50	-1.6
2,668,560	-		ABZR87_RS12595	0.50	-1.3
2,668,598	+		ABZR87_RS12595	0.53	-1.4
2,668,599	-		ABZR87_RS12595	0.53	-2.8
2,668,751	+		ABZR87_RS12595	0.63	+0.3
2,668,751	+		ABZR87_RS12595	0.63	-1.8
2,668,751	+		ABZR87_RS12595	0.63	+2.2
2,668,751	+		ABZR87_RS12595	0.63	-2.6
2,668,752	+		ABZR87_RS12595	0.63	-0.7
2,668,752	-		ABZR87_RS12595	0.63	+0.2
2,668,752	-		ABZR87_RS12595	0.63	-1.0
2,668,752	-		ABZR87_RS12595	0.63	-0.2
2,668,752	-		ABZR87_RS12595	0.63	-0.0
2,668,752	-		ABZR87_RS12595	0.63	-1.5
2,668,755	+		ABZR87_RS12595	0.63	-1.5
2,668,785	+		ABZR87_RS12595	0.65	+0.5
2,668,785	+		ABZR87_RS12595	0.65	-1.9
2,668,785	+		ABZR87_RS12595	0.65	+0.0
2,668,785	+		ABZR87_RS12595	0.65	-0.4
2,668,786	-		ABZR87_RS12595	0.65	+0.3
2,668,786	-		ABZR87_RS12595	0.65	-0.2
2,668,786	-		ABZR87_RS12595	0.65	-1.1
2,668,913	+		ABZR87_RS12595	0.73	-0.6
2,668,914	-		ABZR87_RS12595	0.73	-1.5
2,668,930	+		ABZR87_RS12595	0.74	-1.6
2,668,930	+		ABZR87_RS12595	0.74	-2.0
2,669,036	+		ABZR87_RS12595	0.81	-0.5
2,669,036	+		ABZR87_RS12595	0.81	+0.1
2,669,162	+		ABZR87_RS12595	0.90	+0.4
2,669,202	-				-1.0
2,669,234	+				+1.0
2,669,328	-				-0.3
2,669,363	+				+0.9
2,669,389	+				-1.0
2,669,479	+		ABZR87_RS12600	0.13	-0.7
2,669,480	-		ABZR87_RS12600	0.13	-0.5
2,669,480	-		ABZR87_RS12600	0.13	-1.7
2,669,480	-		ABZR87_RS12600	0.13	-0.6
2,669,534	-		ABZR87_RS12600	0.20	-0.2
2,669,740	+		ABZR87_RS12600	0.49	-1.4
2,669,741	-		ABZR87_RS12600	0.49	+0.3
2,669,741	-		ABZR87_RS12600	0.49	-1.2
2,669,741	-		ABZR87_RS12600	0.49	-1.1
2,669,835	-		ABZR87_RS12600	0.62	-0.0
2,669,854	+		ABZR87_RS12600	0.65	-1.8
2,669,855	-		ABZR87_RS12600	0.65	-0.1
2,670,059	-				-1.1
2,670,096	-				+0.0
2,670,147	+				-2.5
2,670,148	-				+0.2