Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS05960

Experiment: Dictyostellum sp.mixed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dictyostellum sp.mixed culture-2
1,273,171	+		ABZR87_RS05955	0.29	-0.3
1,273,172	-		ABZR87_RS05955	0.29	+0.4
1,273,387	+		ABZR87_RS05955	0.49	-0.3
1,273,410	-		ABZR87_RS05955	0.51	+2.0
1,273,410	-		ABZR87_RS05955	0.51	-1.2
1,273,451	+		ABZR87_RS05955	0.55	+0.4
1,273,452	-		ABZR87_RS05955	0.55	+0.5
1,273,730	-		ABZR87_RS05955	0.81	-0.0
1,273,760	-		ABZR87_RS05955	0.84	-1.0
1,274,043	+				-0.0
1,274,123	+				+0.4
1,274,199	+		ABZR87_RS05960	0.14	+1.6
1,274,199	+		ABZR87_RS05960	0.14	-0.2
1,274,199	+		ABZR87_RS05960	0.14	+0.2
1,274,199	+		ABZR87_RS05960	0.14	+0.2
1,274,199	+		ABZR87_RS05960	0.14	+0.9
1,274,199	+		ABZR87_RS05960	0.14	+0.0
1,274,200	-		ABZR87_RS05960	0.14	-0.3
1,274,200	-		ABZR87_RS05960	0.14	+0.9
1,274,200	-		ABZR87_RS05960	0.14	-0.4
1,274,200	-		ABZR87_RS05960	0.14	-0.4
1,274,238	+		ABZR87_RS05960	0.16	-0.2
1,274,376	+		ABZR87_RS05960	0.23	+0.0
1,274,377	-		ABZR87_RS05960	0.23	+0.3
1,274,377	-		ABZR87_RS05960	0.23	+1.0
1,274,898	+		ABZR87_RS05960	0.52	-0.2
1,274,898	+		ABZR87_RS05960	0.52	-1.4
1,274,899	-		ABZR87_RS05960	0.53	+0.2
1,274,994	+		ABZR87_RS05960	0.58	-0.7
1,274,994	+		ABZR87_RS05960	0.58	+1.4
1,274,994	+		ABZR87_RS05960	0.58	+1.5
1,274,994	+		ABZR87_RS05960	0.58	+0.2
1,274,995	-		ABZR87_RS05960	0.58	-0.8
1,274,995	-		ABZR87_RS05960	0.58	+0.5
1,275,196	-		ABZR87_RS05960	0.69	+0.4
1,275,196	-		ABZR87_RS05960	0.69	-0.4
1,275,243	+		ABZR87_RS05960	0.72	-0.3
1,275,244	-		ABZR87_RS05960	0.72	-0.0
1,275,244	-		ABZR87_RS05960	0.72	+0.5
1,275,418	-		ABZR87_RS05960	0.81	+0.1
1,275,492	+		ABZR87_RS05960	0.86	+1.5
1,275,492	+		ABZR87_RS05960	0.86	-0.7
1,275,549	-		ABZR87_RS05960	0.89	-2.3
1,275,549	-		ABZR87_RS05960	0.89	-0.6
1,275,711	+				-0.7
1,275,711	+				+0.7
1,275,711	+				+1.5
1,275,712	-				+1.0
1,275,915	+		ABZR87_RS05965	0.28	+1.3
1,276,096	+		ABZR87_RS05965	0.66	-2.0
1,276,097	-		ABZR87_RS05965	0.66	+1.0
1,276,097	-		ABZR87_RS05965	0.66	-1.1
1,276,378	+				+0.6
1,276,378	+				-0.6
1,276,378	+				+1.0
1,276,379	-				-0.7
1,276,379	-				+0.1
1,276,379	-				-1.8
1,276,379	-				-0.8
1,276,450	+				-0.1
1,276,450	+				+1.1
1,276,450	+				+0.1
1,276,450	+				+0.1
1,276,451	-				-0.1
1,276,457	+				-0.5
1,276,457	+				-0.2
1,276,457	+				-0.0
1,276,458	-				-1.9
1,276,458	-				+0.6
1,276,528	+		ABZR87_RS05970	0.15	+0.5
1,276,529	-		ABZR87_RS05970	0.15	+0.1
1,276,598	+		ABZR87_RS05970	0.30	-0.4
1,276,598	+		ABZR87_RS05970	0.30	+0.3
1,276,598	+		ABZR87_RS05970	0.30	-1.0
1,276,599	-		ABZR87_RS05970	0.30	-1.1
1,276,692	+		ABZR87_RS05970	0.50	-0.1
1,276,693	-		ABZR87_RS05970	0.50	+0.5