Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS29320

Experiment: Glucose (C) and Ammonium chloride (N); with MOPS; with chloride

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Glucose (C) and Ammonium chloride (N); with MOPS; with chloride
6,509,627	+				+0.2
6,509,627	+				+0.9
6,509,627	+				-0.7
6,509,627	+				-2.2
6,509,627	+				-0.5
6,509,627	+				-0.1
6,509,627	+				-0.8
6,509,627	+				-0.0
6,509,627	+				-0.0
6,509,627	+				-0.1
6,509,627	+				+0.7
6,509,627	+				-1.4
6,509,628	-				-0.2
6,509,628	-				+1.4
6,509,628	-				+0.3
6,509,628	-				+1.9
6,509,628	-				-2.2
6,509,628	-				+2.1
6,509,731	+				+0.2
6,509,731	+				+0.6
6,509,731	+				+3.0
6,509,731	+				-1.0
6,509,731	+				-3.3
6,509,731	+				+0.1
6,509,732	-				+2.5
6,509,732	-				+1.5
6,509,732	-				+1.0
6,509,732	-				+0.3
6,509,733	+				+1.7
6,509,733	+				+0.9
6,509,733	+				+0.8
6,509,733	+				-0.8
6,509,733	+				+2.3
6,509,733	+				+1.4
6,509,733	+				-0.2
6,509,733	+				-0.7
6,509,733	+				+1.0
6,509,733	+				-0.1
6,509,733	+				-1.2
6,509,733	+				-0.7
6,509,733	+				+1.6
6,509,733	+				-0.7
6,509,733	+				+2.7
6,509,734	-				-1.8
6,509,734	-				+2.8
6,509,734	-				-0.7
6,509,734	-				-2.3
6,509,734	-				-0.6
6,509,734	-				-2.7
6,509,734	-				-2.0
6,509,734	-				-2.7
6,509,734	-				+1.4
6,509,734	-				+0.3
6,509,734	-				-0.0
6,509,734	-				-1.5
6,509,747	+				+0.7
6,509,747	+				+0.5
6,509,747	+				-2.3
6,509,747	+				+2.1
6,509,747	+				+0.3
6,509,747	+				-1.1
6,509,747	+				+1.3
6,509,747	+				+0.5
6,509,747	+				-0.3
6,509,747	+				-2.8
6,509,747	+				-0.7
6,509,748	-				-0.7
6,509,748	-				-1.4
6,509,748	-				-0.3
6,509,748	-				+0.2
6,509,748	-				-2.2
6,509,748	-				+1.6
6,509,748	-				-1.1
6,509,748	-				-0.1
6,509,748	-				+1.3
6,509,748	-				-2.2
6,509,776	-				-1.8
6,509,776	-				-1.3
6,510,003	+		PFLU_RS29310	0.84	-1.4
6,510,003	+		PFLU_RS29310	0.84	-1.2
6,510,042	-				-2.4
6,510,091	-				-0.7
6,510,140	+		PFLU_RS29315	0.19	+0.1
6,510,141	-		PFLU_RS29315	0.20	-1.2
6,510,356	+		PFLU_RS29315	0.66	+1.7
6,510,356	+		PFLU_RS29315	0.66	-2.6
6,510,357	-		PFLU_RS29315	0.66	-0.6
6,510,357	-		PFLU_RS29315	0.66	+2.1
6,510,357	-		PFLU_RS29315	0.66	+0.3
6,510,357	-		PFLU_RS29315	0.66	-1.4
6,510,357	-		PFLU_RS29315	0.66	-0.1
6,510,357	-		PFLU_RS29315	0.66	+0.2
6,510,478	+				-2.2
6,510,478	+				-0.3
6,510,478	+				+2.5
6,510,478	+				-1.6
6,510,479	-				+0.3
6,510,479	-				-1.2
6,510,479	-				+0.4
6,510,490	+				+2.9
6,510,490	+				-0.5
6,510,490	+				-0.1
6,510,491	-				-1.5
6,510,491	-				+0.2
6,510,491	-				-2.5
6,510,514	+				+1.5
6,510,514	+				+2.6
6,510,514	+				-2.5
6,510,514	+				-2.0
6,510,514	+				-2.3
6,510,514	+				-1.8
6,510,514	+				-2.3
6,510,514	+				+0.5
6,510,514	+				+0.4
6,510,514	+				-0.8
6,510,514	+				+0.9
6,510,514	+				-0.5
6,510,514	+				+0.9
6,510,515	-				-2.6
6,510,515	-				-0.8
6,510,515	-				+1.9
6,510,515	-				-2.4
6,510,515	-				-1.8
6,510,515	-				-1.0
6,510,515	-				-3.1
6,510,515	-				-0.8
6,510,515	-				-1.2
6,510,515	-				-0.3
6,510,515	-				+1.5
6,510,515	-				+2.5
6,510,515	-				-1.6
6,510,515	-				+1.7
6,510,515	-				-1.1
6,510,515	-				-2.5
6,510,515	-				-0.8
6,510,515	-				-1.5
6,510,515	-				+0.4
6,510,523	+				-2.2
6,510,523	+				+2.5
6,510,524	-				-1.0
6,510,524	-				-0.8
6,510,524	-				+0.8
6,510,559	+				+1.0
6,510,559	+				+0.0
6,510,559	+				+0.1
6,510,559	+				+1.0
6,510,559	+				-1.8
6,510,559	+				+0.6
6,510,560	-				+0.5
6,510,560	-				+1.7
6,510,560	-				+1.1
6,510,560	-				-2.7
6,510,560	-				-1.0
6,510,560	-				-1.6
6,510,560	-				+1.1
6,510,768	+		PFLU_RS29320	0.11	+1.1
6,510,768	+		PFLU_RS29320	0.11	-2.0
6,510,768	+		PFLU_RS29320	0.11	+2.7
6,510,769	-		PFLU_RS29320	0.11	+1.1
6,510,769	-		PFLU_RS29320	0.11	+0.4
6,510,769	-		PFLU_RS29320	0.11	+0.9
6,510,784	+		PFLU_RS29320	0.12	-1.8
6,511,009	-		PFLU_RS29320	0.27	-2.0
6,511,016	+		PFLU_RS29320	0.27	-2.0
6,511,016	+		PFLU_RS29320	0.27	-0.3
6,511,016	+		PFLU_RS29320	0.27	-1.0
6,511,017	-		PFLU_RS29320	0.27	+0.6
6,511,017	-		PFLU_RS29320	0.27	+0.4
6,511,132	+		PFLU_RS29320	0.35	-3.0
6,511,132	+		PFLU_RS29320	0.35	-1.1
6,511,132	+		PFLU_RS29320	0.35	-3.4
6,511,132	+		PFLU_RS29320	0.35	-1.6
6,511,132	+		PFLU_RS29320	0.35	-1.0
6,511,132	+		PFLU_RS29320	0.35	+1.0
6,511,132	+		PFLU_RS29320	0.35	+0.9
6,511,132	+		PFLU_RS29320	0.35	-1.1
6,511,132	+		PFLU_RS29320	0.35	+0.4
6,511,132	+		PFLU_RS29320	0.35	+0.9
6,511,132	+		PFLU_RS29320	0.35	-1.0
6,511,132	+		PFLU_RS29320	0.35	-0.1
6,511,132	+		PFLU_RS29320	0.35	+0.9
6,511,132	+		PFLU_RS29320	0.35	-0.0
6,511,133	-		PFLU_RS29320	0.35	-3.7
6,511,133	-		PFLU_RS29320	0.35	+0.4
6,511,133	-		PFLU_RS29320	0.35	-2.9
6,511,133	-		PFLU_RS29320	0.35	-1.0
6,511,133	-		PFLU_RS29320	0.35	-0.0
6,511,133	-		PFLU_RS29320	0.35	-2.8
6,511,133	-		PFLU_RS29320	0.35	+1.0
6,511,133	-		PFLU_RS29320	0.35	+2.6
6,511,133	-		PFLU_RS29320	0.35	-2.2
6,511,133	-		PFLU_RS29320	0.35	-0.4
6,511,133	-		PFLU_RS29320	0.35	-1.1
6,511,133	-		PFLU_RS29320	0.35	-0.1
6,511,134	+		PFLU_RS29320	0.35	-0.6
6,511,134	+		PFLU_RS29320	0.35	+1.5
6,511,134	+		PFLU_RS29320	0.35	-1.6
6,511,134	+		PFLU_RS29320	0.35	-2.6
6,511,134	+		PFLU_RS29320	0.35	-2.4
6,511,135	-		PFLU_RS29320	0.35	-1.4
6,511,135	-		PFLU_RS29320	0.35	-1.0
6,511,135	-		PFLU_RS29320	0.35	-1.0
6,511,135	-		PFLU_RS29320	0.35	+2.9
6,511,135	-		PFLU_RS29320	0.35	+0.9
6,511,153	+		PFLU_RS29320	0.36	+3.5
6,511,153	+		PFLU_RS29320	0.36	+0.7
6,511,153	+		PFLU_RS29320	0.36	-1.1
6,511,153	+		PFLU_RS29320	0.36	+1.5
6,511,153	+		PFLU_RS29320	0.36	+2.2
6,511,153	+		PFLU_RS29320	0.36	-0.3
6,511,153	+		PFLU_RS29320	0.36	-0.5
6,511,153	+		PFLU_RS29320	0.36	+0.5
6,511,153	+		PFLU_RS29320	0.36	+1.5
6,511,154	-		PFLU_RS29320	0.37	+1.7
6,511,154	-		PFLU_RS29320	0.37	-1.6
6,511,154	-		PFLU_RS29320	0.37	-0.3
6,511,154	-		PFLU_RS29320	0.37	+0.4
6,511,154	-		PFLU_RS29320	0.37	+2.3
6,511,154	-		PFLU_RS29320	0.37	+2.3
6,511,154	-		PFLU_RS29320	0.37	-1.8
6,511,154	-		PFLU_RS29320	0.37	+1.6
6,511,154	-		PFLU_RS29320	0.37	-0.8
6,511,161	+		PFLU_RS29320	0.37	-2.2
6,511,161	+		PFLU_RS29320	0.37	+1.7
6,511,161	+		PFLU_RS29320	0.37	+1.9
6,511,162	-		PFLU_RS29320	0.37	-1.0
6,511,162	-		PFLU_RS29320	0.37	+2.8
6,511,162	-		PFLU_RS29320	0.37	-0.1
6,511,162	-		PFLU_RS29320	0.37	-1.4
6,511,242	+		PFLU_RS29320	0.42	+1.4
6,511,242	+		PFLU_RS29320	0.42	-2.5
6,511,242	+		PFLU_RS29320	0.42	-0.5
6,511,242	+		PFLU_RS29320	0.42	-1.5
6,511,242	+		PFLU_RS29320	0.42	-1.0
6,511,242	+		PFLU_RS29320	0.42	+0.2
6,511,242	+		PFLU_RS29320	0.42	-0.5
6,511,242	+		PFLU_RS29320	0.42	+0.7
6,511,242	+		PFLU_RS29320	0.42	+1.0
6,511,242	+		PFLU_RS29320	0.42	+0.4
6,511,242	+		PFLU_RS29320	0.42	-1.4
6,511,242	+		PFLU_RS29320	0.42	-2.6
6,511,242	+		PFLU_RS29320	0.42	+1.0
6,511,242	+		PFLU_RS29320	0.42	-0.3
6,511,242	+		PFLU_RS29320	0.42	-0.3
6,511,243	-		PFLU_RS29320	0.42	+0.5
6,511,243	-		PFLU_RS29320	0.42	-0.3
6,511,243	-		PFLU_RS29320	0.42	+0.2
6,511,243	-		PFLU_RS29320	0.42	-2.3
6,511,243	-		PFLU_RS29320	0.42	+2.1
6,511,243	-		PFLU_RS29320	0.42	+0.5
6,511,243	-		PFLU_RS29320	0.42	+0.5
6,511,243	-		PFLU_RS29320	0.42	-1.8
6,511,243	-		PFLU_RS29320	0.42	+0.4
6,511,544	+		PFLU_RS29320	0.63	+1.2
6,511,545	-		PFLU_RS29320	0.63	-2.4
6,511,545	-		PFLU_RS29320	0.63	+1.7
6,511,545	-		PFLU_RS29320	0.63	-1.5
6,511,573	-		PFLU_RS29320	0.65	-3.1
6,511,573	-		PFLU_RS29320	0.65	-1.8
6,511,658	-		PFLU_RS29320	0.70	-0.5
6,511,690	-		PFLU_RS29320	0.72	-0.5
6,511,690	-		PFLU_RS29320	0.72	+0.0
6,511,690	-		PFLU_RS29320	0.72	-2.3
6,511,839	-		PFLU_RS29320	0.82	+0.7
6,511,907	+		PFLU_RS29320	0.87	-0.4
6,511,908	-		PFLU_RS29320	0.87	+1.0
6,512,393	+		PFLU_RS29325	0.11	+1.0
6,512,394	-		PFLU_RS29325	0.11	-1.0
6,512,394	-		PFLU_RS29325	0.11	+0.8
6,512,394	-		PFLU_RS29325	0.11	+1.2
6,512,394	-		PFLU_RS29325	0.11	-0.8
6,512,559	+		PFLU_RS29325	0.19	-1.6
6,512,559	+		PFLU_RS29325	0.19	-1.6
6,512,559	+		PFLU_RS29325	0.19	-0.1
6,512,559	+		PFLU_RS29325	0.19	+3.0
6,512,559	+		PFLU_RS29325	0.19	-0.5
6,512,559	+		PFLU_RS29325	0.19	+2.2
6,512,559	+		PFLU_RS29325	0.19	-0.3
6,512,560	-		PFLU_RS29325	0.19	-1.2
6,512,560	-		PFLU_RS29325	0.19	-1.8
6,512,560	-		PFLU_RS29325	0.19	-0.7
6,512,560	-		PFLU_RS29325	0.19	-1.2
6,512,560	-		PFLU_RS29325	0.19	-0.7
6,512,560	-		PFLU_RS29325	0.19	-0.8
6,512,560	-		PFLU_RS29325	0.19	+2.5
6,512,560	-		PFLU_RS29325	0.19	-1.5
6,512,560	-		PFLU_RS29325	0.19	+0.5
6,512,560	-		PFLU_RS29325	0.19	+2.1
6,512,560	-		PFLU_RS29325	0.19	+0.9
6,512,560	-		PFLU_RS29325	0.19	+1.6
6,512,560	-		PFLU_RS29325	0.19	+0.7
6,512,560	-		PFLU_RS29325	0.19	-2.4
6,512,663	+		PFLU_RS29325	0.25	-0.5
6,512,663	+		PFLU_RS29325	0.25	+0.6
6,512,664	-		PFLU_RS29325	0.25	+0.5
6,512,664	-		PFLU_RS29325	0.25	+0.2
6,512,664	-		PFLU_RS29325	0.25	+2.5
6,512,714	+		PFLU_RS29325	0.27	-0.4
6,512,714	+		PFLU_RS29325	0.27	+2.2
6,512,714	+		PFLU_RS29325	0.27	+0.1
6,512,715	-		PFLU_RS29325	0.27	+0.8
6,512,715	-		PFLU_RS29325	0.27	-2.1
6,512,750	+		PFLU_RS29325	0.29	-1.1
6,512,751	-		PFLU_RS29325	0.29	-0.8
6,512,883	+		PFLU_RS29325	0.36	+1.4
6,512,884	-		PFLU_RS29325	0.36	+0.8
6,512,935	+		PFLU_RS29325	0.38	+0.1
6,512,935	+		PFLU_RS29325	0.38	-1.8
6,512,935	+		PFLU_RS29325	0.38	-0.9
6,512,935	+		PFLU_RS29325	0.38	-1.0
6,512,936	-		PFLU_RS29325	0.38	-0.1
6,512,936	-		PFLU_RS29325	0.38	-0.7
6,512,936	-		PFLU_RS29325	0.38	-0.5
6,512,936	-		PFLU_RS29325	0.38	-1.5