Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS23305

Experiment: Dictyostellum sp.mixed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dictyostellum sp.mixed culture-1
1,590,635	-		ABZR87_RS23290	0.55	+1.3
1,591,019	-				-1.3
1,591,023	-				+1.0
1,591,046	+				+0.2
1,591,047	-				+0.9
1,591,087	-		ABZR87_RS23295	0.17	-0.1
1,591,087	-		ABZR87_RS23295	0.17	+0.1
1,591,609	+				-0.9
1,591,609	+				-1.2
1,591,609	+				-0.1
1,591,609	+				-1.5
1,591,609	+				-1.1
1,591,610	-				-0.6
1,591,610	-				-3.1
1,591,610	-				-0.8
1,591,610	-				-2.3
1,591,610	-				+0.2
1,591,611	-				+0.6
1,591,631	+				-1.2
1,591,631	+				+0.2
1,591,631	+				+0.5
1,591,631	+				-1.9
1,591,631	+				-1.1
1,591,631	+				+1.0
1,591,632	-				-2.3
1,591,632	-				-1.0
1,591,696	+				+0.1
1,591,697	-				-1.1
1,591,697	-				-2.8
1,591,697	-				-2.9
1,591,697	-				-0.7
1,591,831	-		ABZR87_RS23305	0.15	-0.0
1,591,831	-		ABZR87_RS23305	0.15	-2.0
1,591,831	-		ABZR87_RS23305	0.15	-1.3
1,591,831	-		ABZR87_RS23305	0.15	-0.6
1,591,872	+		ABZR87_RS23305	0.17	-1.2
1,591,873	-		ABZR87_RS23305	0.17	-1.3
1,591,873	-		ABZR87_RS23305	0.17	-1.3
1,592,004	+		ABZR87_RS23305	0.25	-0.2
1,592,005	-		ABZR87_RS23305	0.25	+0.5
1,592,005	-		ABZR87_RS23305	0.25	-2.3
1,592,034	+		ABZR87_RS23305	0.27	-1.6
1,592,034	+		ABZR87_RS23305	0.27	-0.3
1,592,035	-		ABZR87_RS23305	0.27	-2.2
1,592,035	-		ABZR87_RS23305	0.27	-0.1
1,592,035	-		ABZR87_RS23305	0.27	-0.5
1,592,035	-		ABZR87_RS23305	0.27	-0.3
1,592,433	+		ABZR87_RS23305	0.52	-0.2
1,592,434	-		ABZR87_RS23305	0.52	+1.9
1,592,470	+		ABZR87_RS23305	0.54	-0.1
1,592,471	-		ABZR87_RS23305	0.54	-2.0
1,592,502	+		ABZR87_RS23305	0.56	-1.3
1,592,602	-		ABZR87_RS23305	0.62	+0.2
1,592,602	-		ABZR87_RS23305	0.62	-1.1
1,592,613	+		ABZR87_RS23305	0.63	-1.6
1,592,634	+		ABZR87_RS23305	0.64	-3.0
1,592,635	-		ABZR87_RS23305	0.64	-2.7
1,592,662	-		ABZR87_RS23305	0.66	-2.4
1,592,697	+		ABZR87_RS23305	0.68	-1.4
1,592,697	+		ABZR87_RS23305	0.68	-1.3
1,592,697	+		ABZR87_RS23305	0.68	-2.0
1,592,874	+		ABZR87_RS23305	0.79	-1.1
1,592,875	-		ABZR87_RS23305	0.79	-1.6
1,592,875	-		ABZR87_RS23305	0.79	-2.7
1,592,875	-		ABZR87_RS23305	0.79	-0.2
1,592,877	+		ABZR87_RS23305	0.79	-0.1
1,592,878	-		ABZR87_RS23305	0.79	-1.2
1,592,878	-		ABZR87_RS23305	0.79	+0.0
1,592,878	-		ABZR87_RS23305	0.79	-0.6
1,592,878	-		ABZR87_RS23305	0.79	-0.9
1,592,878	-		ABZR87_RS23305	0.79	-1.4
1,592,878	-		ABZR87_RS23305	0.79	-0.7
1,592,878	-		ABZR87_RS23305	0.79	-1.5
1,593,213	+				-0.7
1,593,213	+				+0.0
1,593,213	+				-0.2
1,593,213	+				-0.4
1,593,214	-				-1.8
1,593,214	-				-0.5
1,593,214	-				-0.4
1,593,214	-				-0.3
1,593,214	-				+0.8
1,593,214	-				+2.1
1,593,214	-				-0.2
1,593,214	-				-0.3
1,593,214	-				-0.4
1,593,219	+				-0.1
1,593,219	+				-2.9
1,593,220	-				+0.1
1,593,220	-				+0.7
1,593,349	+				-0.3
1,593,350	-				+0.1
1,593,350	-				+1.4
1,593,350	-				-0.6
1,593,401	-				-1.8
1,593,684	+		ABZR87_RS23310	0.16	-1.0
1,593,684	+		ABZR87_RS23310	0.16	-0.0
1,593,684	+		ABZR87_RS23310	0.16	+0.1
1,593,744	+		ABZR87_RS23310	0.19	+0.2
1,593,745	-		ABZR87_RS23310	0.19	-0.5
1,593,745	-		ABZR87_RS23310	0.19	-0.1
1,593,843	+		ABZR87_RS23310	0.23	-0.4
1,593,843	+		ABZR87_RS23310	0.23	+0.2
1,593,843	+		ABZR87_RS23310	0.23	+0.4
1,593,844	-		ABZR87_RS23310	0.23	+0.2
1,593,844	-		ABZR87_RS23310	0.23	-0.2
1,593,844	-		ABZR87_RS23310	0.23	+0.1
1,593,929	+		ABZR87_RS23310	0.27	-0.2
1,593,929	+		ABZR87_RS23310	0.27	+0.4
1,593,929	+		ABZR87_RS23310	0.27	+0.1
1,593,930	-		ABZR87_RS23310	0.27	+0.4
1,594,052	+		ABZR87_RS23310	0.33	+0.6
1,594,052	+		ABZR87_RS23310	0.33	-0.6
1,594,052	+		ABZR87_RS23310	0.33	-0.2
1,594,052	+		ABZR87_RS23310	0.33	+0.2
1,594,053	-		ABZR87_RS23310	0.33	-1.3
1,594,053	-		ABZR87_RS23310	0.33	+0.4
1,594,128	+		ABZR87_RS23310	0.36	-0.1
1,594,128	+		ABZR87_RS23310	0.36	+0.4
1,594,128	+		ABZR87_RS23310	0.36	+0.1
1,594,128	+		ABZR87_RS23310	0.36	-0.7
1,594,128	+		ABZR87_RS23310	0.36	+0.0
1,594,129	-		ABZR87_RS23310	0.36	-0.4
1,594,129	-		ABZR87_RS23310	0.36	+0.1
1,594,156	-		ABZR87_RS23310	0.38	+0.2
1,594,158	+		ABZR87_RS23310	0.38	-0.1
1,594,158	+		ABZR87_RS23310	0.38	+0.5
1,594,158	+		ABZR87_RS23310	0.38	-0.4
1,594,158	+		ABZR87_RS23310	0.38	-0.4