Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS22535

Experiment: Dictyostellum sp.mixed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dictyostellum sp.mixed culture-1
1,412,822	+		ABZR87_RS22530	0.46	+0.2
1,412,822	+		ABZR87_RS22530	0.46	+0.1
1,412,822	+		ABZR87_RS22530	0.46	+0.4
1,412,822	+		ABZR87_RS22530	0.46	+0.3
1,412,822	+		ABZR87_RS22530	0.46	-0.2
1,412,823	-		ABZR87_RS22530	0.46	+1.1
1,412,823	-		ABZR87_RS22530	0.46	-0.4
1,412,823	-		ABZR87_RS22530	0.46	-1.1
1,412,823	-		ABZR87_RS22530	0.46	+0.9
1,412,823	-		ABZR87_RS22530	0.46	-0.1
1,412,823	-		ABZR87_RS22530	0.46	+0.9
1,412,885	+		ABZR87_RS22530	0.50	-0.1
1,412,886	-		ABZR87_RS22530	0.50	-0.3
1,412,886	-		ABZR87_RS22530	0.50	+0.9
1,412,894	+		ABZR87_RS22530	0.51	-0.7
1,412,895	-		ABZR87_RS22530	0.51	-3.4
1,412,895	-		ABZR87_RS22530	0.51	-0.3
1,412,895	-		ABZR87_RS22530	0.51	-0.1
1,412,895	-		ABZR87_RS22530	0.51	-1.9
1,412,895	-		ABZR87_RS22530	0.51	-0.6
1,413,105	+		ABZR87_RS22530	0.66	-0.1
1,413,106	-		ABZR87_RS22530	0.66	-0.0
1,413,106	-		ABZR87_RS22530	0.66	+0.0
1,413,299	-		ABZR87_RS22530	0.79	+1.9
1,413,444	+		ABZR87_RS22530	0.89	+1.3
1,413,446	+		ABZR87_RS22530	0.89	+0.3
1,413,446	+		ABZR87_RS22530	0.89	+0.5
1,413,446	+		ABZR87_RS22530	0.89	+0.5
1,413,446	+		ABZR87_RS22530	0.89	+0.2
1,413,446	+		ABZR87_RS22530	0.89	+1.7
1,413,446	+		ABZR87_RS22530	0.89	+0.2
1,413,447	-		ABZR87_RS22530	0.89	+1.4
1,413,447	-		ABZR87_RS22530	0.89	-0.2
1,413,447	-		ABZR87_RS22530	0.89	+0.2
1,413,447	-		ABZR87_RS22530	0.89	-0.8
1,413,447	-		ABZR87_RS22530	0.89	-0.5
1,413,447	-		ABZR87_RS22530	0.89	+0.4
1,413,617	+				-0.6
1,413,618	-				+0.3
1,413,660	+				+0.4
1,413,660	+				+1.2
1,413,661	-				+0.0
1,413,696	-				+0.9
1,413,788	+				+0.2
1,413,788	+				-0.3
1,413,788	+				+0.6
1,413,789	-				+0.8
1,413,789	-				-1.0
1,413,789	-				-0.5
1,413,789	-				+0.7
1,413,789	-				-2.2
1,413,789	-				-0.2
1,414,715	+		ABZR87_RS22535	0.60	-0.2
1,414,715	+		ABZR87_RS22535	0.60	+0.2
1,414,715	+		ABZR87_RS22535	0.60	-1.2
1,414,715	+		ABZR87_RS22535	0.60	+0.2
1,414,715	+		ABZR87_RS22535	0.60	+0.1
1,414,715	+		ABZR87_RS22535	0.60	-0.9
1,414,716	-		ABZR87_RS22535	0.60	+1.1
1,414,716	-		ABZR87_RS22535	0.60	+0.4
1,414,756	-		ABZR87_RS22535	0.63	-0.4
1,414,803	-		ABZR87_RS22535	0.66	-1.0
1,414,859	+		ABZR87_RS22535	0.69	+0.2
1,414,860	-		ABZR87_RS22535	0.69	+0.0
1,414,860	-		ABZR87_RS22535	0.69	-0.6
1,414,860	-		ABZR87_RS22535	0.69	-0.4
1,414,860	-		ABZR87_RS22535	0.69	-0.9
1,414,860	-		ABZR87_RS22535	0.69	-0.5
1,414,999	-		ABZR87_RS22535	0.78	+0.1
1,415,334	+				+0.1
1,415,334	+				-0.4
1,415,334	+				+1.2
1,415,334	+				-0.8
1,415,334	+				+0.1
1,415,335	-				+0.2
1,415,335	-				-0.2
1,415,335	-				-0.5
1,415,335	-				-0.2
1,415,335	-				-0.4
1,415,707	+		ABZR87_RS22540	0.47	+1.6
1,415,710	-		ABZR87_RS22540	0.48	-0.3
1,415,711	+		ABZR87_RS22540	0.48	-0.1
1,415,711	+		ABZR87_RS22540	0.48	+0.3
1,415,711	+		ABZR87_RS22540	0.48	-1.2
1,415,712	-		ABZR87_RS22540	0.48	+0.3
1,415,712	-		ABZR87_RS22540	0.48	+0.8
1,415,735	+		ABZR87_RS22540	0.53	-0.9
1,415,735	+		ABZR87_RS22540	0.53	+2.1
1,415,735	+		ABZR87_RS22540	0.53	+0.3
1,415,787	+		ABZR87_RS22540	0.63	-0.7
1,415,788	-		ABZR87_RS22540	0.63	+0.2
1,415,788	-		ABZR87_RS22540	0.63	-1.0
1,415,852	+		ABZR87_RS22540	0.76	+0.7
1,415,852	+		ABZR87_RS22540	0.76	+0.9
1,415,853	-		ABZR87_RS22540	0.77	+0.2
1,415,933	-				-0.9
1,415,933	-				+0.4
1,416,325	+		ABZR87_RS22545	0.25	-0.3
1,416,326	-		ABZR87_RS22545	0.25	-0.6
1,416,326	-		ABZR87_RS22545	0.25	+0.3
1,416,326	-		ABZR87_RS22545	0.25	+0.0
1,416,326	-		ABZR87_RS22545	0.25	-0.5
1,416,326	-		ABZR87_RS22545	0.25	+2.1