Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS16225

Experiment: Dictyostellum sp.mixed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dictyostellum sp.mixed culture-1
3,432,494	+		ABZR87_RS16220	0.69	-0.5
3,432,494	+		ABZR87_RS16220	0.69	-0.4
3,432,494	+		ABZR87_RS16220	0.69	-1.3
3,432,494	+		ABZR87_RS16220	0.69	-0.1
3,432,494	+		ABZR87_RS16220	0.69	-0.2
3,432,495	-		ABZR87_RS16220	0.69	+0.7
3,432,495	-		ABZR87_RS16220	0.69	-0.7
3,432,495	-		ABZR87_RS16220	0.69	+1.3
3,432,495	-		ABZR87_RS16220	0.69	+0.7
3,432,545	+		ABZR87_RS16220	0.71	+0.0
3,432,545	+		ABZR87_RS16220	0.71	-0.0
3,432,545	+		ABZR87_RS16220	0.71	+0.0
3,432,546	-		ABZR87_RS16220	0.71	+1.7
3,432,546	-		ABZR87_RS16220	0.71	-0.4
3,432,546	-		ABZR87_RS16220	0.71	+0.2
3,432,546	-		ABZR87_RS16220	0.71	-1.8
3,432,546	-		ABZR87_RS16220	0.71	+0.1
3,432,573	+		ABZR87_RS16220	0.72	+0.7
3,432,573	+		ABZR87_RS16220	0.72	+0.3
3,432,573	+		ABZR87_RS16220	0.72	-0.2
3,432,575	+		ABZR87_RS16220	0.72	+0.2
3,432,576	-		ABZR87_RS16220	0.72	-0.3
3,432,576	-		ABZR87_RS16220	0.72	-0.6
3,432,674	+		ABZR87_RS16220	0.75	+0.2
3,432,674	+		ABZR87_RS16220	0.75	+0.7
3,432,675	-		ABZR87_RS16220	0.75	+0.5
3,432,675	-		ABZR87_RS16220	0.75	-0.6
3,432,707	+		ABZR87_RS16220	0.76	+0.4
3,432,707	+		ABZR87_RS16220	0.76	-1.4
3,432,707	+		ABZR87_RS16220	0.76	+0.3
3,432,707	+		ABZR87_RS16220	0.76	-1.5
3,432,708	-		ABZR87_RS16220	0.76	+0.1
3,432,708	-		ABZR87_RS16220	0.76	+0.5
3,432,728	+		ABZR87_RS16220	0.77	-0.0
3,432,729	-		ABZR87_RS16220	0.77	-0.3
3,432,833	+		ABZR87_RS16220	0.80	-0.3
3,432,833	+		ABZR87_RS16220	0.80	-0.1
3,432,833	+		ABZR87_RS16220	0.80	-1.3
3,432,833	+		ABZR87_RS16220	0.80	-0.5
3,432,834	-		ABZR87_RS16220	0.81	-1.0
3,432,834	-		ABZR87_RS16220	0.81	+0.8
3,432,999	-		ABZR87_RS16220	0.86	+0.9
3,432,999	-		ABZR87_RS16220	0.86	-0.5
3,433,159	+				+0.3
3,433,160	-				+0.2
3,433,394	-				-0.1
3,433,394	-				-0.4
3,433,506	+				+0.4
3,433,506	+				-0.1
3,433,506	+				+0.0
3,433,506	+				-0.3
3,433,507	-				+0.8
3,433,507	-				+0.4
3,433,507	-				+0.6
3,433,507	-				-0.1
3,433,507	-				+0.3
3,433,507	-				+0.2
3,433,509	+				+0.5
3,433,509	+				+0.0
3,433,509	+				+0.0
3,433,509	+				-0.3
3,433,509	+				+0.5
3,433,509	+				+1.0
3,433,510	-				-0.6
3,433,510	-				+0.4
3,433,577	-		ABZR87_RS16225	0.35	-0.5
3,433,577	-		ABZR87_RS16225	0.35	-0.3
3,433,781	+				+0.2
3,433,781	+				+0.2
3,433,782	-				-1.4
3,433,784	+				+0.1
3,433,805	+				-0.9
3,433,806	-				-0.1
3,433,806	-				+0.9
3,433,868	+				-0.1
3,433,868	+				+0.5
3,433,869	-				+0.1
3,433,869	-				+1.0
3,434,043	+				-0.2
3,434,043	+				-2.0
3,434,043	+				+1.3
3,434,043	+				+0.5
3,434,044	-		ABZR87_RS16230	0.10	+0.2
3,434,044	-		ABZR87_RS16230	0.10	-2.0
3,434,044	-		ABZR87_RS16230	0.10	+1.1
3,434,069	+		ABZR87_RS16230	0.14	+0.1
3,434,069	+		ABZR87_RS16230	0.14	-1.4
3,434,069	+		ABZR87_RS16230	0.14	+0.5
3,434,069	+		ABZR87_RS16230	0.14	-0.7
3,434,070	-		ABZR87_RS16230	0.14	+0.4
3,434,070	-		ABZR87_RS16230	0.14	-0.3
3,434,070	-		ABZR87_RS16230	0.14	-0.4
3,434,087	-		ABZR87_RS16230	0.17	+0.0
3,434,172	+		ABZR87_RS16230	0.29	+0.6
3,434,173	-		ABZR87_RS16230	0.29	-0.0
3,434,173	-		ABZR87_RS16230	0.29	-0.4
3,434,173	-		ABZR87_RS16230	0.29	-0.1
3,434,173	-		ABZR87_RS16230	0.29	+0.3
3,434,304	+		ABZR87_RS16230	0.49	-0.2
3,434,304	+		ABZR87_RS16230	0.49	-1.9
3,434,304	+		ABZR87_RS16230	0.49	-0.5
3,434,304	+		ABZR87_RS16230	0.49	-0.4
3,434,305	-		ABZR87_RS16230	0.49	-0.1
3,434,305	-		ABZR87_RS16230	0.49	-0.2
3,434,305	-		ABZR87_RS16230	0.49	+1.1
3,434,305	-		ABZR87_RS16230	0.49	-0.4
3,434,307	+		ABZR87_RS16230	0.49	-0.4
3,434,308	-		ABZR87_RS16230	0.49	-0.3
3,434,308	-		ABZR87_RS16230	0.49	+1.0
3,434,308	-		ABZR87_RS16230	0.49	+1.0
3,434,308	-		ABZR87_RS16230	0.49	+0.4
3,434,308	-		ABZR87_RS16230	0.49	-1.3
3,434,316	+		ABZR87_RS16230	0.51	-0.3
3,434,317	-		ABZR87_RS16230	0.51	+0.9
3,434,317	-		ABZR87_RS16230	0.51	-0.4
3,434,317	-		ABZR87_RS16230	0.51	+0.7
3,434,361	+		ABZR87_RS16230	0.57	+0.7
3,434,361	+		ABZR87_RS16230	0.57	+0.7
3,434,361	+		ABZR87_RS16230	0.57	+0.7
3,434,362	-		ABZR87_RS16230	0.57	-0.1
3,434,470	+		ABZR87_RS16230	0.74	+0.3
3,434,471	-		ABZR87_RS16230	0.74	+0.3
3,434,565	+		ABZR87_RS16230	0.88	+0.1
3,434,565	+		ABZR87_RS16230	0.88	-0.3