Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS15490

Experiment: Dictyostellum sp.mixed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dictyostellum sp.mixed culture-1
3,259,741	+				+1.3
3,259,741	+				+2.5
3,259,742	-				+2.0
3,259,742	-				+1.7
3,259,776	+				+1.8
3,259,895	+				+1.1
3,259,895	+				+1.3
3,259,895	+				+1.6
3,259,895	+				+1.3
3,259,896	-				-0.1
3,259,896	-				+1.3
3,259,936	+		ABZR87_RS15485	0.15	+0.9
3,259,936	+		ABZR87_RS15485	0.15	+1.4
3,259,937	-		ABZR87_RS15485	0.15	+0.0
3,259,937	-		ABZR87_RS15485	0.15	+1.1
3,259,991	+		ABZR87_RS15485	0.21	+1.2
3,260,207	+		ABZR87_RS15485	0.47	+1.3
3,260,379	-		ABZR87_RS15485	0.67	+2.9
3,260,604	+				+1.3
3,260,605	-				+1.8
3,260,606	+				-0.6
3,260,606	+				+0.9
3,260,606	+				+1.0
3,260,607	-				+0.7
3,260,607	-				+0.7
3,260,607	-				+1.2
3,260,607	-				+2.0
3,260,607	-				+1.2
3,260,607	-				+1.9
3,260,607	-				+1.2
3,260,614	-				+1.3
3,260,682	+				+1.1
3,260,689	-				+0.8
3,260,689	-				+0.4
3,260,689	-				+1.0
3,260,691	+				+1.1
3,260,692	-				-1.6
3,260,763	+		ABZR87_RS15490	0.16	+1.5
3,260,763	+		ABZR87_RS15490	0.16	+1.8
3,260,763	+		ABZR87_RS15490	0.16	+0.7
3,260,763	+		ABZR87_RS15490	0.16	+2.4
3,260,763	+		ABZR87_RS15490	0.16	+2.3
3,260,763	+		ABZR87_RS15490	0.16	+1.7
3,260,763	+		ABZR87_RS15490	0.16	+1.6
3,260,763	+		ABZR87_RS15490	0.16	+1.1
3,260,764	-		ABZR87_RS15490	0.16	+1.7
3,260,764	-		ABZR87_RS15490	0.16	+1.6
3,260,764	-		ABZR87_RS15490	0.16	+0.2
3,260,764	-		ABZR87_RS15490	0.16	+1.9
3,260,764	-		ABZR87_RS15490	0.16	+2.5
3,260,764	-		ABZR87_RS15490	0.16	+1.9
3,260,764	-		ABZR87_RS15490	0.16	+1.6
3,260,764	-		ABZR87_RS15490	0.16	+1.4
3,260,764	-		ABZR87_RS15490	0.16	+0.9
3,260,764	-		ABZR87_RS15490	0.16	+1.1
3,260,764	-		ABZR87_RS15490	0.16	+1.4
3,260,767	+		ABZR87_RS15490	0.16	+1.3
3,260,767	+		ABZR87_RS15490	0.16	+1.9
3,260,767	+		ABZR87_RS15490	0.16	+1.1
3,260,767	+		ABZR87_RS15490	0.16	+1.2
3,260,832	+		ABZR87_RS15490	0.25	+1.5
3,260,832	+		ABZR87_RS15490	0.25	+0.8
3,260,832	+		ABZR87_RS15490	0.25	+1.1
3,260,833	-		ABZR87_RS15490	0.25	+1.3
3,260,859	+		ABZR87_RS15490	0.28	+1.0
3,260,904	+		ABZR87_RS15490	0.34	+1.9
3,260,905	-		ABZR87_RS15490	0.34	+1.6
3,261,082	-		ABZR87_RS15490	0.57	+0.6
3,261,329	+		ABZR87_RS15490	0.89	+1.5
3,261,330	-		ABZR87_RS15490	0.89	+1.9
3,261,472	+				+1.1
3,261,472	+				+2.9
3,261,473	-				+0.2
3,261,473	-				+1.2
3,261,473	-				+1.5
3,261,504	+				+1.3
3,261,504	+				+1.6
3,261,557	+		ABZR87_RS15495	0.10	+2.7
3,261,558	-		ABZR87_RS15495	0.10	+1.4
3,261,558	-		ABZR87_RS15495	0.10	+1.6
3,261,639	+		ABZR87_RS15495	0.16	+0.9
3,261,709	-		ABZR87_RS15495	0.22	+0.9
3,261,709	-		ABZR87_RS15495	0.22	+1.0
3,261,709	-		ABZR87_RS15495	0.22	+1.0
3,261,709	-		ABZR87_RS15495	0.22	+0.3
3,261,709	-		ABZR87_RS15495	0.22	+0.6
3,261,710	+		ABZR87_RS15495	0.22	+2.2
3,261,711	-		ABZR87_RS15495	0.22	+0.4
3,261,903	+		ABZR87_RS15495	0.37	+0.8
3,261,903	+		ABZR87_RS15495	0.37	+1.2
3,261,904	-		ABZR87_RS15495	0.37	+0.9
3,261,949	+		ABZR87_RS15495	0.41	+1.7
3,261,965	+		ABZR87_RS15495	0.42	+1.4
3,261,965	+		ABZR87_RS15495	0.42	+1.2
3,261,966	-		ABZR87_RS15495	0.42	+0.5
3,261,966	-		ABZR87_RS15495	0.42	+1.1
3,261,966	-		ABZR87_RS15495	0.42	+0.2
3,261,966	-		ABZR87_RS15495	0.42	+0.8
3,261,966	-		ABZR87_RS15495	0.42	+0.1
3,262,098	+		ABZR87_RS15495	0.52	+1.4
3,262,098	+		ABZR87_RS15495	0.52	+0.4
3,262,098	+		ABZR87_RS15495	0.52	-0.3
3,262,098	+		ABZR87_RS15495	0.52	+1.1
3,262,098	+		ABZR87_RS15495	0.52	+1.8
3,262,098	+		ABZR87_RS15495	0.52	+0.5
3,262,098	+		ABZR87_RS15495	0.52	+0.7
3,262,099	-		ABZR87_RS15495	0.52	+1.6
3,262,099	-		ABZR87_RS15495	0.52	+1.0
3,262,099	-		ABZR87_RS15495	0.52	+1.3
3,262,099	-		ABZR87_RS15495	0.52	+1.7
3,262,099	-		ABZR87_RS15495	0.52	-0.1
3,262,099	-		ABZR87_RS15495	0.52	+1.3
3,262,099	-		ABZR87_RS15495	0.52	+1.9
3,262,099	-		ABZR87_RS15495	0.52	+1.7
3,262,099	-		ABZR87_RS15495	0.52	+1.6
3,262,165	+		ABZR87_RS15495	0.58	+1.4
3,262,281	+		ABZR87_RS15495	0.67	-0.5
3,262,281	+		ABZR87_RS15495	0.67	-0.4
3,262,281	+		ABZR87_RS15495	0.67	-0.3
3,262,281	+		ABZR87_RS15495	0.67	+1.3
3,262,289	+		ABZR87_RS15495	0.67	+1.3
3,262,289	+		ABZR87_RS15495	0.67	+0.4
3,262,290	-		ABZR87_RS15495	0.67	+1.2
3,262,290	-		ABZR87_RS15495	0.67	+0.9
3,262,290	-		ABZR87_RS15495	0.67	+0.9
3,262,345	+		ABZR87_RS15495	0.72	+2.0
3,262,346	-		ABZR87_RS15495	0.72	+0.7
3,262,346	-		ABZR87_RS15495	0.72	+0.6