Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS12355

Experiment: Dictyostellum sp.mixed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dictyostellum sp.mixed culture-1
2,619,709	+				-0.8
2,619,710	-				+0.0
2,619,895	-		ABZR87_RS12350	0.29	-1.0
2,619,895	-		ABZR87_RS12350	0.29	+0.3
2,619,895	-		ABZR87_RS12350	0.29	-0.7
2,619,895	-		ABZR87_RS12350	0.29	-0.4
2,619,925	-		ABZR87_RS12350	0.35	-1.3
2,619,939	+		ABZR87_RS12350	0.38	+0.8
2,619,940	-		ABZR87_RS12350	0.38	-0.7
2,619,940	-		ABZR87_RS12350	0.38	-0.4
2,620,095	+		ABZR87_RS12350	0.68	+0.5
2,620,095	+		ABZR87_RS12350	0.68	-0.1
2,620,173	+		ABZR87_RS12350	0.83	-0.4
2,620,227	+				-0.8
2,620,260	+				-0.5
2,620,260	+				+0.2
2,620,260	+				-0.5
2,620,340	+				+1.4
2,620,340	+				-0.3
2,620,340	+				+1.9
2,620,341	-				+0.8
2,620,341	-				+0.3
2,620,345	+				+1.6
2,620,345	+				-0.4
2,620,345	+				-0.4
2,620,346	-				-0.2
2,620,346	-				-0.3
2,620,346	-				+0.0
2,620,485	+		ABZR87_RS12355	0.11	-0.4
2,620,485	+		ABZR87_RS12355	0.11	-1.7
2,620,486	-		ABZR87_RS12355	0.11	-0.0
2,620,650	+		ABZR87_RS12355	0.42	+0.7
2,620,651	-		ABZR87_RS12355	0.42	-0.2
2,620,651	-		ABZR87_RS12355	0.42	-0.3
2,620,756	+		ABZR87_RS12355	0.62	+0.4
2,620,756	+		ABZR87_RS12355	0.62	+0.2
2,620,756	+		ABZR87_RS12355	0.62	+0.2
2,620,757	-		ABZR87_RS12355	0.63	-2.9
2,620,757	-		ABZR87_RS12355	0.63	+0.6
2,620,757	-		ABZR87_RS12355	0.63	-0.6
2,620,757	-		ABZR87_RS12355	0.63	-0.0
2,620,888	+		ABZR87_RS12355	0.88	+0.7
2,620,888	+		ABZR87_RS12355	0.88	-0.6
2,620,889	-		ABZR87_RS12355	0.88	-0.9
2,620,970	+				-0.1
2,620,970	+				+0.8
2,620,971	-				+1.0
2,620,971	-				+0.1
2,620,971	-				-0.7
2,620,971	-				+0.2
2,620,971	-				-0.3
2,620,971	-				+0.3
2,621,048	+		ABZR87_RS12360	0.15	-0.1
2,621,112	+		ABZR87_RS12360	0.22	+0.6
2,621,113	-		ABZR87_RS12360	0.23	+0.0
2,621,113	-		ABZR87_RS12360	0.23	+0.4
2,621,210	+		ABZR87_RS12360	0.34	+0.4
2,621,210	+		ABZR87_RS12360	0.34	-1.1
2,621,211	-		ABZR87_RS12360	0.34	+0.6
2,621,228	+		ABZR87_RS12360	0.36	-0.3
2,621,229	-		ABZR87_RS12360	0.36	-0.2
2,621,229	-		ABZR87_RS12360	0.36	-0.6
2,621,253	-		ABZR87_RS12360	0.39	+0.2
2,621,339	+		ABZR87_RS12360	0.49	+0.1
2,621,339	+		ABZR87_RS12360	0.49	+0.4
2,621,339	+		ABZR87_RS12360	0.49	+0.2
2,621,339	+		ABZR87_RS12360	0.49	+0.5
2,621,340	-		ABZR87_RS12360	0.49	+2.4
2,621,340	-		ABZR87_RS12360	0.49	+0.2
2,621,340	-		ABZR87_RS12360	0.49	+2.0
2,621,340	-		ABZR87_RS12360	0.49	+0.3
2,621,357	+		ABZR87_RS12360	0.51	+0.9
2,621,357	+		ABZR87_RS12360	0.51	-0.7
2,621,357	+		ABZR87_RS12360	0.51	-0.8
2,621,358	-		ABZR87_RS12360	0.51	+0.4
2,621,358	-		ABZR87_RS12360	0.51	-0.5
2,621,358	-		ABZR87_RS12360	0.51	-1.1
2,621,414	+		ABZR87_RS12360	0.58	+0.2
2,621,658	+		ABZR87_RS12360	0.87	+0.1
2,621,658	+		ABZR87_RS12360	0.87	-0.0
2,621,659	-		ABZR87_RS12360	0.87	-0.2
2,621,659	-		ABZR87_RS12360	0.87	+0.3
2,621,659	-		ABZR87_RS12360	0.87	+0.1
2,621,741	+				+0.6
2,621,742	-				+0.0
2,621,742	-				+2.2
2,621,742	-				+1.5
2,621,742	-				+0.5
2,621,745	+				+0.4
2,621,746	-				+0.7
2,621,897	+		ABZR87_RS12365	0.49	-0.3
2,621,897	+		ABZR87_RS12365	0.49	-0.1
2,621,930	+		ABZR87_RS12365	0.65	+1.7
2,621,930	+		ABZR87_RS12365	0.65	-0.1
2,621,930	+		ABZR87_RS12365	0.65	+0.0
2,621,930	+		ABZR87_RS12365	0.65	+0.2
2,621,931	-		ABZR87_RS12365	0.65	-0.3
2,621,931	-		ABZR87_RS12365	0.65	+0.2
2,621,931	-		ABZR87_RS12365	0.65	+0.2
2,621,931	-		ABZR87_RS12365	0.65	+0.4
2,621,931	-		ABZR87_RS12365	0.65	-0.3
2,621,931	-		ABZR87_RS12365	0.65	+1.6
2,621,931	-		ABZR87_RS12365	0.65	+0.0