Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS12200

Experiment: Dictyostellum sp.mixed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dictyostellum sp.mixed culture-1
2,585,825	-		ABZR87_RS12195	0.55	-0.5
2,585,830	+		ABZR87_RS12195	0.55	+0.6
2,585,908	+		ABZR87_RS12195	0.59	+0.3
2,585,908	+		ABZR87_RS12195	0.59	-0.6
2,585,908	+		ABZR87_RS12195	0.59	+1.8
2,586,067	+		ABZR87_RS12195	0.68	+0.1
2,586,067	+		ABZR87_RS12195	0.68	+1.6
2,586,068	-		ABZR87_RS12195	0.68	+0.1
2,586,068	-		ABZR87_RS12195	0.68	+0.6
2,586,068	-		ABZR87_RS12195	0.68	-0.2
2,586,280	+		ABZR87_RS12195	0.79	-0.9
2,586,281	-		ABZR87_RS12195	0.79	-0.5
2,586,472	+		ABZR87_RS12195	0.89	+0.5
2,586,473	-		ABZR87_RS12195	0.89	-0.2
2,586,649	+				+0.2
2,586,649	+				+1.1
2,586,649	+				-0.4
2,586,650	-				-0.5
2,586,739	+				-0.2
2,586,739	+				+0.8
2,586,739	+				+0.1
2,586,739	+				-0.0
2,586,740	-				+0.1
2,586,832	+		ABZR87_RS12200	0.10	-0.9
2,586,832	+		ABZR87_RS12200	0.10	+0.8
2,586,946	+		ABZR87_RS12200	0.19	-1.1
2,586,946	+		ABZR87_RS12200	0.19	+0.7
2,586,946	+		ABZR87_RS12200	0.19	+0.4
2,586,946	+		ABZR87_RS12200	0.19	-0.2
2,586,947	-		ABZR87_RS12200	0.19	-0.1
2,586,947	-		ABZR87_RS12200	0.19	-1.1
2,586,947	-		ABZR87_RS12200	0.19	-0.2
2,586,947	-		ABZR87_RS12200	0.19	+0.3
2,586,947	-		ABZR87_RS12200	0.19	-0.2
2,586,991	-		ABZR87_RS12200	0.23	-0.4
2,587,036	+		ABZR87_RS12200	0.27	+0.4
2,587,037	-		ABZR87_RS12200	0.27	+0.8
2,587,096	+		ABZR87_RS12200	0.32	+0.1
2,587,096	+		ABZR87_RS12200	0.32	+0.5
2,587,096	+		ABZR87_RS12200	0.32	-0.2
2,587,096	+		ABZR87_RS12200	0.32	-0.3
2,587,097	-		ABZR87_RS12200	0.32	-0.6
2,587,097	-		ABZR87_RS12200	0.32	-0.1
2,587,097	-		ABZR87_RS12200	0.32	+0.9
2,587,097	-		ABZR87_RS12200	0.32	+1.3
2,587,097	-		ABZR87_RS12200	0.32	+0.4
2,587,097	-		ABZR87_RS12200	0.32	+0.3
2,587,097	-		ABZR87_RS12200	0.32	-1.9
2,587,205	-		ABZR87_RS12200	0.40	+0.3
2,587,205	-		ABZR87_RS12200	0.40	-0.9
2,587,279	-		ABZR87_RS12200	0.46	-0.9
2,587,321	+		ABZR87_RS12200	0.50	+0.5
2,587,322	-		ABZR87_RS12200	0.50	-2.0
2,587,322	-		ABZR87_RS12200	0.50	+0.5
2,587,322	-		ABZR87_RS12200	0.50	-0.1
2,587,322	-		ABZR87_RS12200	0.50	-1.7
2,587,409	-		ABZR87_RS12200	0.57	-0.5
2,587,443	+		ABZR87_RS12200	0.60	-0.3
2,587,443	+		ABZR87_RS12200	0.60	-0.6
2,587,512	+		ABZR87_RS12200	0.65	+0.5
2,587,512	+		ABZR87_RS12200	0.65	-0.4
2,587,512	+		ABZR87_RS12200	0.65	-0.3
2,587,555	-		ABZR87_RS12200	0.69	+0.4
2,587,636	+		ABZR87_RS12200	0.76	+1.7
2,587,636	+		ABZR87_RS12200	0.76	+0.4
2,587,636	+		ABZR87_RS12200	0.76	-0.2
2,587,636	+		ABZR87_RS12200	0.76	+1.0
2,587,637	-		ABZR87_RS12200	0.76	+0.0
2,587,637	-		ABZR87_RS12200	0.76	-0.6
2,587,807	+		ABZR87_RS12200	0.89	+1.5
2,587,808	-		ABZR87_RS12200	0.90	-0.3
2,587,808	-		ABZR87_RS12200	0.90	-1.2
2,587,934	-				+0.4
2,587,934	-				-0.1
2,587,934	-				-0.8
2,587,934	-				-1.0
2,587,946	+				+0.3
2,587,946	+				+0.3
2,587,946	+				+0.3
2,587,947	-				+0.2
2,587,986	+				+0.5
2,587,986	+				+0.2
2,587,986	+				+0.1
2,587,987	-				-0.3
2,587,987	-				-0.4
2,587,987	-				-0.1
2,587,989	+				+1.3
2,587,990	-				+0.5
2,587,990	-				+0.6
2,588,208	+		ABZR87_RS12205	0.17	-0.7
2,588,209	-		ABZR87_RS12205	0.17	+0.7
2,588,287	+		ABZR87_RS12205	0.24	+0.9
2,588,288	-		ABZR87_RS12205	0.24	+1.0
2,588,353	+		ABZR87_RS12205	0.30	+0.1
2,588,354	-		ABZR87_RS12205	0.30	+1.6
2,588,392	+		ABZR87_RS12205	0.33	+0.4
2,588,392	+		ABZR87_RS12205	0.33	+0.6
2,588,392	+		ABZR87_RS12205	0.33	+0.4
2,588,392	+		ABZR87_RS12205	0.33	-0.9
2,588,392	+		ABZR87_RS12205	0.33	+0.4
2,588,392	+		ABZR87_RS12205	0.33	-0.6
2,588,393	-		ABZR87_RS12205	0.34	+0.7
2,588,393	-		ABZR87_RS12205	0.34	-0.1
2,588,393	-		ABZR87_RS12205	0.34	-0.7
2,588,393	-		ABZR87_RS12205	0.34	+0.3
2,588,393	-		ABZR87_RS12205	0.34	+0.2
2,588,527	+		ABZR87_RS12205	0.45	+1.4
2,588,527	+		ABZR87_RS12205	0.45	-0.0
2,588,527	+		ABZR87_RS12205	0.45	+1.1
2,588,527	+		ABZR87_RS12205	0.45	-0.1
2,588,528	-		ABZR87_RS12205	0.45	-0.1
2,588,528	-		ABZR87_RS12205	0.45	-1.0
2,588,528	-		ABZR87_RS12205	0.45	-0.4
2,588,528	-		ABZR87_RS12205	0.45	+0.5
2,588,528	-		ABZR87_RS12205	0.45	-0.6
2,588,798	-		ABZR87_RS12205	0.69	+0.4
2,588,798	-		ABZR87_RS12205	0.69	+0.4
2,588,798	-		ABZR87_RS12205	0.69	-0.3
2,588,798	-		ABZR87_RS12205	0.69	+0.1
2,588,798	-		ABZR87_RS12205	0.69	+0.4