Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS07200

Experiment: Dictyostellum sp.mixed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dictyostellum sp.mixed culture-1
1,523,563	+		ABZR87_RS07195	0.53	+0.3
1,523,563	+		ABZR87_RS07195	0.53	-0.2
1,523,563	+		ABZR87_RS07195	0.53	-2.9
1,523,563	+		ABZR87_RS07195	0.53	-1.3
1,523,564	-		ABZR87_RS07195	0.53	-0.8
1,523,564	-		ABZR87_RS07195	0.53	-0.9
1,523,564	-		ABZR87_RS07195	0.53	-0.0
1,523,579	+		ABZR87_RS07195	0.54	-1.6
1,523,579	+		ABZR87_RS07195	0.54	-0.9
1,523,579	+		ABZR87_RS07195	0.54	+0.1
1,523,579	+		ABZR87_RS07195	0.54	+0.0
1,523,579	+		ABZR87_RS07195	0.54	-0.3
1,523,580	-		ABZR87_RS07195	0.54	+0.4
1,523,580	-		ABZR87_RS07195	0.54	+0.2
1,523,655	+		ABZR87_RS07195	0.58	-0.1
1,523,656	-		ABZR87_RS07195	0.58	+0.5
1,523,656	-		ABZR87_RS07195	0.58	-0.2
1,523,657	+		ABZR87_RS07195	0.58	-0.4
1,523,698	+		ABZR87_RS07195	0.61	+0.1
1,523,698	+		ABZR87_RS07195	0.61	-0.5
1,523,698	+		ABZR87_RS07195	0.61	-1.0
1,523,698	+		ABZR87_RS07195	0.61	-1.5
1,523,699	-		ABZR87_RS07195	0.61	+0.3
1,523,724	+		ABZR87_RS07195	0.63	-2.1
1,523,724	+		ABZR87_RS07195	0.63	-0.4
1,523,724	+		ABZR87_RS07195	0.63	-0.0
1,523,725	-		ABZR87_RS07195	0.63	-0.2
1,523,725	-		ABZR87_RS07195	0.63	-2.4
1,523,725	-		ABZR87_RS07195	0.63	-0.5
1,523,751	+		ABZR87_RS07195	0.64	+0.3
1,523,751	+		ABZR87_RS07195	0.64	-0.3
1,523,752	-		ABZR87_RS07195	0.64	-0.1
1,523,752	-		ABZR87_RS07195	0.64	-0.7
1,523,802	-		ABZR87_RS07195	0.67	-0.1
1,523,802	-		ABZR87_RS07195	0.67	-0.1
1,523,802	-		ABZR87_RS07195	0.67	-0.1
1,523,802	-		ABZR87_RS07195	0.67	-0.9
1,523,827	+		ABZR87_RS07195	0.69	-0.7
1,523,827	+		ABZR87_RS07195	0.69	-0.6
1,523,827	+		ABZR87_RS07195	0.69	-0.2
1,523,827	+		ABZR87_RS07195	0.69	+0.5
1,523,827	+		ABZR87_RS07195	0.69	-0.2
1,523,827	+		ABZR87_RS07195	0.69	-0.7
1,523,828	-		ABZR87_RS07195	0.69	+0.8
1,523,936	+		ABZR87_RS07195	0.76	-1.1
1,523,937	-		ABZR87_RS07195	0.76	-0.5
1,523,937	-		ABZR87_RS07195	0.76	-0.2
1,523,953	+		ABZR87_RS07195	0.77	+0.1
1,523,953	+		ABZR87_RS07195	0.77	-0.0
1,523,954	-		ABZR87_RS07195	0.77	-0.6
1,523,954	-		ABZR87_RS07195	0.77	+0.6
1,523,954	-		ABZR87_RS07195	0.77	-0.4
1,524,008	+		ABZR87_RS07195	0.80	+0.2
1,524,008	+		ABZR87_RS07195	0.80	-0.4
1,524,008	+		ABZR87_RS07195	0.80	+0.0
1,524,008	+		ABZR87_RS07195	0.80	+1.3
1,524,008	+		ABZR87_RS07195	0.80	+0.2
1,524,009	-		ABZR87_RS07195	0.80	+0.6
1,524,009	-		ABZR87_RS07195	0.80	-0.6
1,524,009	-		ABZR87_RS07195	0.80	-0.2
1,524,009	-		ABZR87_RS07195	0.80	-0.3
1,524,009	-		ABZR87_RS07195	0.80	+0.5
1,524,009	-		ABZR87_RS07195	0.80	+0.7
1,524,021	+		ABZR87_RS07195	0.81	-1.0
1,524,021	+		ABZR87_RS07195	0.81	-0.8
1,524,061	+		ABZR87_RS07195	0.83	+1.2
1,524,062	-		ABZR87_RS07195	0.83	+0.6
1,524,170	+		ABZR87_RS07195	0.90	-0.3
1,524,170	+		ABZR87_RS07195	0.90	-0.8
1,524,171	-				-1.6
1,524,171	-				-1.5
1,524,171	-				-0.7
1,524,182	+				-0.7
1,524,182	+				+0.1
1,524,183	-				-1.1
1,524,183	-				-0.3
1,524,183	-				-0.4
1,524,183	-				-0.3
1,524,217	-				+0.5
1,524,217	-				-1.5
1,524,217	-				+0.7
1,524,219	-				-0.1
1,524,219	-				-0.2
1,524,264	+				+1.1
1,524,268	+				-0.8
1,524,269	-				+0.4
1,524,269	-				-0.5
1,524,269	-				-0.1
1,524,269	-				+0.4
1,524,309	+				+0.3
1,524,310	-				-0.3
1,524,414	+				-0.5
1,524,415	-				+0.4
1,524,415	-				-0.5
1,524,415	-				+1.3
1,524,450	+				-0.6
1,524,478	+				+1.1
1,524,478	+				-0.7
1,524,498	+				-0.0
1,524,498	+				+0.1
1,524,498	+				-0.2
1,524,498	+				+0.1
1,524,498	+				-0.9
1,524,498	+				+0.9
1,524,498	+				-0.8
1,524,498	+				+0.8
1,524,498	+				-0.7
1,524,498	+				+0.2
1,524,499	-				-0.8
1,524,499	-				+0.5
1,524,499	-				-0.1
1,524,513	-				+0.2
1,524,513	-				-0.0
1,524,590	+				-0.5
1,524,590	+				-0.4
1,524,591	-				+0.4
1,524,798	+		ABZR87_RS07200	0.15	+0.8
1,524,798	+		ABZR87_RS07200	0.15	-0.2
1,524,839	+		ABZR87_RS07200	0.17	-0.3
1,524,839	+		ABZR87_RS07200	0.17	+1.3
1,524,839	+		ABZR87_RS07200	0.17	-0.3
1,524,839	+		ABZR87_RS07200	0.17	-0.1
1,524,840	-		ABZR87_RS07200	0.17	+0.5
1,524,840	-		ABZR87_RS07200	0.17	-0.2
1,524,840	-		ABZR87_RS07200	0.17	+0.5
1,524,860	+		ABZR87_RS07200	0.18	-1.5
1,524,860	+		ABZR87_RS07200	0.18	-1.8
1,524,860	+		ABZR87_RS07200	0.18	-0.9
1,524,861	-		ABZR87_RS07200	0.18	+0.4
1,524,861	-		ABZR87_RS07200	0.18	-1.2
1,524,878	+		ABZR87_RS07200	0.19	-1.1
1,524,878	+		ABZR87_RS07200	0.19	+0.1
1,524,878	+		ABZR87_RS07200	0.19	+0.1
1,524,878	+		ABZR87_RS07200	0.19	-1.1
1,524,956	-		ABZR87_RS07200	0.23	+0.1
1,524,969	+		ABZR87_RS07200	0.23	-0.3
1,524,969	+		ABZR87_RS07200	0.23	-0.3
1,524,969	+		ABZR87_RS07200	0.23	-0.5
1,524,969	+		ABZR87_RS07200	0.23	+0.2
1,524,969	+		ABZR87_RS07200	0.23	+1.1
1,524,969	+		ABZR87_RS07200	0.23	-0.7
1,524,969	+		ABZR87_RS07200	0.23	-2.8
1,524,969	+		ABZR87_RS07200	0.23	-0.4
1,524,970	-		ABZR87_RS07200	0.23	-1.0
1,524,970	-		ABZR87_RS07200	0.23	+0.4
1,524,970	-		ABZR87_RS07200	0.23	-0.4
1,524,970	-		ABZR87_RS07200	0.23	-0.7
1,524,970	-		ABZR87_RS07200	0.23	-0.4
1,524,970	-		ABZR87_RS07200	0.23	-0.4
1,524,970	-		ABZR87_RS07200	0.23	+0.7
1,524,970	-		ABZR87_RS07200	0.23	+0.1
1,524,970	-		ABZR87_RS07200	0.23	-0.7
1,525,046	+		ABZR87_RS07200	0.27	-0.3
1,525,046	+		ABZR87_RS07200	0.27	+0.1
1,525,046	+		ABZR87_RS07200	0.27	-1.7
1,525,046	+		ABZR87_RS07200	0.27	-0.1
1,525,046	+		ABZR87_RS07200	0.27	+0.2
1,525,046	+		ABZR87_RS07200	0.27	-0.7
1,525,046	+		ABZR87_RS07200	0.27	-0.3
1,525,046	+		ABZR87_RS07200	0.27	-0.0
1,525,047	-		ABZR87_RS07200	0.27	-0.2
1,525,047	-		ABZR87_RS07200	0.27	+0.3
1,525,047	-		ABZR87_RS07200	0.27	-0.0
1,525,047	-		ABZR87_RS07200	0.27	-0.2
1,525,047	-		ABZR87_RS07200	0.27	+0.1
1,525,047	-		ABZR87_RS07200	0.27	+1.7
1,525,047	-		ABZR87_RS07200	0.27	-0.0
1,525,047	-		ABZR87_RS07200	0.27	-0.5
1,525,047	-		ABZR87_RS07200	0.27	-0.1
1,525,047	-		ABZR87_RS07200	0.27	-2.4
1,525,109	+		ABZR87_RS07200	0.30	-0.3
1,525,109	+		ABZR87_RS07200	0.30	+0.6
1,525,110	-		ABZR87_RS07200	0.30	-0.6
1,525,110	-		ABZR87_RS07200	0.30	+0.8
1,525,110	-		ABZR87_RS07200	0.30	-0.4
1,525,110	-		ABZR87_RS07200	0.30	-0.5
1,525,126	+		ABZR87_RS07200	0.31	+1.2
1,525,126	+		ABZR87_RS07200	0.31	+0.4
1,525,126	+		ABZR87_RS07200	0.31	-0.7
1,525,126	+		ABZR87_RS07200	0.31	-1.5
1,525,126	+		ABZR87_RS07200	0.31	-1.2
1,525,126	+		ABZR87_RS07200	0.31	-0.9
1,525,126	+		ABZR87_RS07200	0.31	-0.7
1,525,127	-		ABZR87_RS07200	0.31	+0.3
1,525,127	-		ABZR87_RS07200	0.31	-1.5
1,525,127	-		ABZR87_RS07200	0.31	+0.2
1,525,127	-		ABZR87_RS07200	0.31	+0.1
1,525,127	-		ABZR87_RS07200	0.31	+0.2
1,525,141	-		ABZR87_RS07200	0.32	+0.8
1,525,141	-		ABZR87_RS07200	0.32	+0.4
1,525,149	+		ABZR87_RS07200	0.32	+0.7
1,525,149	+		ABZR87_RS07200	0.32	+0.8
1,525,149	+		ABZR87_RS07200	0.32	-1.7
1,525,149	+		ABZR87_RS07200	0.32	+1.2
1,525,150	-		ABZR87_RS07200	0.32	+0.0
1,525,150	-		ABZR87_RS07200	0.32	-0.7
1,525,187	+		ABZR87_RS07200	0.34	-0.1
1,525,187	+		ABZR87_RS07200	0.34	+0.0
1,525,187	+		ABZR87_RS07200	0.34	-0.9
1,525,188	-		ABZR87_RS07200	0.34	-0.3
1,525,188	-		ABZR87_RS07200	0.34	+0.4
1,525,206	+		ABZR87_RS07200	0.35	-0.4
1,525,206	+		ABZR87_RS07200	0.35	-0.3
1,525,207	-		ABZR87_RS07200	0.35	+0.9
1,525,321	+		ABZR87_RS07200	0.40	-1.0
1,525,343	+		ABZR87_RS07200	0.42	+0.8
1,525,343	+		ABZR87_RS07200	0.42	-0.4
1,525,343	+		ABZR87_RS07200	0.42	+0.4
1,525,343	+		ABZR87_RS07200	0.42	+0.3
1,525,344	-		ABZR87_RS07200	0.42	-0.5
1,525,344	-		ABZR87_RS07200	0.42	-0.7
1,525,346	+		ABZR87_RS07200	0.42	-0.3
1,525,346	+		ABZR87_RS07200	0.42	-0.7
1,525,346	+		ABZR87_RS07200	0.42	+0.1
1,525,347	-		ABZR87_RS07200	0.42	-0.3
1,525,347	-		ABZR87_RS07200	0.42	+0.3
1,525,347	-		ABZR87_RS07200	0.42	+0.5
1,525,347	-		ABZR87_RS07200	0.42	+0.3
1,525,347	-		ABZR87_RS07200	0.42	-1.2
1,525,347	-		ABZR87_RS07200	0.42	-0.4
1,525,385	+		ABZR87_RS07200	0.44	-2.0
1,525,385	+		ABZR87_RS07200	0.44	-0.4
1,525,385	+		ABZR87_RS07200	0.44	-0.5
1,525,386	-		ABZR87_RS07200	0.44	+0.1
1,525,386	-		ABZR87_RS07200	0.44	-0.7
1,525,386	-		ABZR87_RS07200	0.44	-0.4
1,525,402	+		ABZR87_RS07200	0.44	+0.5
1,525,402	+		ABZR87_RS07200	0.44	-0.6
1,525,402	+		ABZR87_RS07200	0.44	+0.4
1,525,402	+		ABZR87_RS07200	0.44	-1.1
1,525,402	+		ABZR87_RS07200	0.44	-0.2
1,525,403	-		ABZR87_RS07200	0.45	-0.1
1,525,408	+		ABZR87_RS07200	0.45	+1.6
1,525,408	+		ABZR87_RS07200	0.45	-0.0
1,525,408	+		ABZR87_RS07200	0.45	+0.3
1,525,408	+		ABZR87_RS07200	0.45	-0.6
1,525,409	-		ABZR87_RS07200	0.45	-0.1
1,525,409	-		ABZR87_RS07200	0.45	+0.6
1,525,436	-		ABZR87_RS07200	0.46	+0.1
1,525,441	+		ABZR87_RS07200	0.46	-0.0
1,525,441	+		ABZR87_RS07200	0.46	+0.6
1,525,441	+		ABZR87_RS07200	0.46	-0.8
1,525,442	-		ABZR87_RS07200	0.46	+0.1
1,525,565	+		ABZR87_RS07200	0.52	+0.8
1,525,565	+		ABZR87_RS07200	0.52	+0.4
1,525,565	+		ABZR87_RS07200	0.52	+0.2
1,525,565	+		ABZR87_RS07200	0.52	+0.3
1,525,565	+		ABZR87_RS07200	0.52	-0.9
1,525,565	+		ABZR87_RS07200	0.52	-0.5
1,525,566	-		ABZR87_RS07200	0.53	-0.9
1,525,566	-		ABZR87_RS07200	0.53	-0.1
1,525,566	-		ABZR87_RS07200	0.53	+0.1
1,525,566	-		ABZR87_RS07200	0.53	-1.2
1,525,566	-		ABZR87_RS07200	0.53	-0.1
1,525,566	-		ABZR87_RS07200	0.53	-1.3
1,525,566	-		ABZR87_RS07200	0.53	-0.2
1,525,566	-		ABZR87_RS07200	0.53	-0.7
1,525,566	-		ABZR87_RS07200	0.53	+0.8
1,525,657	+		ABZR87_RS07200	0.57	-0.2
1,525,657	+		ABZR87_RS07200	0.57	-0.7
1,525,657	+		ABZR87_RS07200	0.57	-0.9
1,525,657	+		ABZR87_RS07200	0.57	+0.7
1,525,658	-		ABZR87_RS07200	0.57	-0.5
1,525,658	-		ABZR87_RS07200	0.57	+0.5
1,525,661	+		ABZR87_RS07200	0.57	-0.1
1,525,661	+		ABZR87_RS07200	0.57	-1.1
1,525,661	+		ABZR87_RS07200	0.57	-0.2
1,525,662	-		ABZR87_RS07200	0.57	+0.4
1,525,662	-		ABZR87_RS07200	0.57	-0.4
1,525,662	-		ABZR87_RS07200	0.57	+0.1
1,525,671	+		ABZR87_RS07200	0.58	+0.2
1,525,699	+		ABZR87_RS07200	0.59	+0.8
1,525,699	+		ABZR87_RS07200	0.59	-0.0
1,525,700	-		ABZR87_RS07200	0.59	-0.9
1,525,700	-		ABZR87_RS07200	0.59	-0.1
1,525,732	+		ABZR87_RS07200	0.61	+1.0
1,525,732	+		ABZR87_RS07200	0.61	+0.5
1,525,732	+		ABZR87_RS07200	0.61	-0.1
1,525,732	+		ABZR87_RS07200	0.61	-1.0
1,525,732	+		ABZR87_RS07200	0.61	+0.6
1,525,733	-		ABZR87_RS07200	0.61	+0.1
1,525,733	-		ABZR87_RS07200	0.61	+1.3
1,525,733	-		ABZR87_RS07200	0.61	+0.2
1,525,735	+		ABZR87_RS07200	0.61	-1.5
1,525,735	+		ABZR87_RS07200	0.61	+0.3
1,525,735	+		ABZR87_RS07200	0.61	-0.2
1,525,735	+		ABZR87_RS07200	0.61	+1.1
1,525,735	+		ABZR87_RS07200	0.61	+0.1
1,525,735	+		ABZR87_RS07200	0.61	+0.6
1,525,735	+		ABZR87_RS07200	0.61	+0.2
1,525,735	+		ABZR87_RS07200	0.61	-0.7
1,525,735	+		ABZR87_RS07200	0.61	+0.5
1,525,736	-		ABZR87_RS07200	0.61	+0.1
1,525,736	-		ABZR87_RS07200	0.61	+1.4
1,525,736	-		ABZR87_RS07200	0.61	-0.2
1,525,736	-		ABZR87_RS07200	0.61	-0.3
1,525,736	-		ABZR87_RS07200	0.61	+0.3
1,525,736	-		ABZR87_RS07200	0.61	+0.5
1,525,736	-		ABZR87_RS07200	0.61	-0.4
1,525,786	+		ABZR87_RS07200	0.63	-0.8
1,525,786	+		ABZR87_RS07200	0.63	+0.4
1,525,787	-		ABZR87_RS07200	0.63	-0.8
1,525,787	-		ABZR87_RS07200	0.63	-0.3
1,525,787	-		ABZR87_RS07200	0.63	-0.3
1,525,787	-		ABZR87_RS07200	0.63	+0.2
1,525,809	+		ABZR87_RS07200	0.64	-1.7
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