Experiment: Dictyostellum sp.mixed culture-1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS06735 and ABZR87_RS06740 are separated by 68 nucleotides ABZR87_RS06740 and ABZR87_RS06745 are separated by 69 nucleotides ABZR87_RS06745 and ABZR87_RS06750 are separated by 118 nucleotides
ABZR87_RS06735: ABZR87_RS06735 - bacterioferritin, at 1,431,479 to 1,431,958
_RS06735
ABZR87_RS06740: ABZR87_RS06740 - molybdopterin-synthase adenylyltransferase MoeB, at 1,432,027 to 1,432,776
_RS06740
ABZR87_RS06745: ABZR87_RS06745 - S41 family peptidase, at 1,432,846 to 1,434,462
_RS06745
ABZR87_RS06750: ABZR87_RS06750 - 2,3-diphosphoglycerate-dependent phosphoglycerate mutase, at 1,434,581 to 1,435,327
_RS06750
Position (kb)
1432
1433
1434
1435 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1431.923 kb on + strand at 1431.923 kb on + strand at 1431.923 kb on + strand at 1431.923 kb on + strand at 1431.923 kb on + strand at 1431.923 kb on + strand at 1431.924 kb on - strand at 1431.924 kb on - strand at 1431.924 kb on - strand at 1431.956 kb on + strand at 1431.956 kb on + strand at 1431.956 kb on + strand at 1431.957 kb on - strand at 1431.957 kb on - strand at 1431.957 kb on - strand at 1432.817 kb on - strand at 1432.817 kb on - strand at 1432.847 kb on + strand at 1432.938 kb on + strand at 1432.938 kb on + strand at 1433.375 kb on + strand, within ABZR87_RS06745 at 1433.376 kb on - strand, within ABZR87_RS06745 at 1433.376 kb on - strand, within ABZR87_RS06745 at 1433.378 kb on + strand, within ABZR87_RS06745 at 1433.378 kb on + strand, within ABZR87_RS06745 at 1433.378 kb on + strand, within ABZR87_RS06745 at 1433.378 kb on + strand, within ABZR87_RS06745 at 1433.379 kb on - strand, within ABZR87_RS06745 at 1433.379 kb on - strand, within ABZR87_RS06745 at 1433.379 kb on - strand, within ABZR87_RS06745 at 1433.381 kb on + strand, within ABZR87_RS06745 at 1433.381 kb on + strand, within ABZR87_RS06745 at 1433.382 kb on - strand, within ABZR87_RS06745 at 1433.382 kb on - strand, within ABZR87_RS06745 at 1433.528 kb on + strand, within ABZR87_RS06745 at 1433.528 kb on + strand, within ABZR87_RS06745 at 1433.528 kb on + strand, within ABZR87_RS06745 at 1433.529 kb on - strand, within ABZR87_RS06745 at 1433.529 kb on - strand, within ABZR87_RS06745 at 1433.529 kb on - strand, within ABZR87_RS06745 at 1433.529 kb on - strand, within ABZR87_RS06745 at 1433.615 kb on + strand, within ABZR87_RS06745 at 1433.615 kb on + strand, within ABZR87_RS06745 at 1433.637 kb on - strand, within ABZR87_RS06745 at 1433.637 kb on - strand, within ABZR87_RS06745 at 1433.637 kb on - strand, within ABZR87_RS06745 at 1433.637 kb on - strand, within ABZR87_RS06745 at 1433.637 kb on - strand, within ABZR87_RS06745 at 1433.957 kb on + strand, within ABZR87_RS06745 at 1433.957 kb on + strand, within ABZR87_RS06745 at 1433.957 kb on + strand, within ABZR87_RS06745 at 1433.957 kb on + strand, within ABZR87_RS06745 at 1433.958 kb on - strand, within ABZR87_RS06745 at 1434.215 kb on + strand, within ABZR87_RS06745 at 1434.215 kb on + strand, within ABZR87_RS06745 at 1434.215 kb on + strand, within ABZR87_RS06745 at 1434.216 kb on - strand, within ABZR87_RS06745 at 1434.216 kb on - strand, within ABZR87_RS06745 at 1434.296 kb on + strand, within ABZR87_RS06745 at 1434.296 kb on + strand, within ABZR87_RS06745 at 1434.403 kb on + strand at 1434.404 kb on - strand at 1434.488 kb on + strand at 1434.488 kb on + strand at 1434.488 kb on + strand at 1434.488 kb on + strand at 1434.488 kb on + strand at 1434.488 kb on + strand at 1434.488 kb on + strand at 1434.488 kb on + strand at 1434.488 kb on + strand at 1434.489 kb on - strand at 1434.489 kb on - strand at 1434.489 kb on - strand at 1434.489 kb on - strand at 1434.489 kb on - strand at 1434.489 kb on - strand at 1434.489 kb on - strand at 1434.492 kb on + strand at 1434.492 kb on + strand at 1434.492 kb on + strand at 1434.492 kb on + strand at 1434.492 kb on + strand at 1434.492 kb on + strand at 1434.493 kb on - strand at 1434.493 kb on - strand at 1434.493 kb on - strand at 1434.493 kb on - strand at 1434.493 kb on - strand at 1434.493 kb on - strand at 1434.493 kb on - strand at 1434.493 kb on - strand at 1434.493 kb on - strand at 1434.544 kb on + strand at 1434.544 kb on + strand at 1434.544 kb on + strand at 1434.544 kb on + strand at 1434.544 kb on + strand at 1434.544 kb on + strand at 1434.544 kb on + strand at 1434.545 kb on - strand at 1434.545 kb on - strand at 1434.545 kb on - strand at 1434.545 kb on - strand at 1434.545 kb on - strand at 1434.545 kb on - strand at 1434.545 kb on - strand at 1434.545 kb on - strand at 1434.546 kb on + strand at 1434.546 kb on + strand at 1434.546 kb on + strand at 1434.546 kb on + strand at 1434.547 kb on - strand at 1434.547 kb on - strand at 1434.547 kb on - strand at 1434.547 kb on - strand at 1434.547 kb on - strand at 1434.547 kb on - strand at 1434.547 kb on - strand at 1434.582 kb on + strand at 1434.583 kb on - strand at 1434.649 kb on - strand at 1434.649 kb on - strand at 1434.649 kb on - strand at 1434.649 kb on - strand at 1434.649 kb on - strand at 1434.649 kb on - strand at 1435.384 kb on + strand at 1435.385 kb on - strand at 1435.385 kb on - strand at 1435.385 kb on - strand at 1435.385 kb on - strand at 1435.385 kb on - strand at 1435.385 kb on - strand at 1435.414 kb on - strand at 1435.414 kb on - strand at 1435.414 kb on - strand at 1435.414 kb on - strand at 1435.418 kb on + strand at 1435.418 kb on + strand at 1435.418 kb on + strand at 1435.418 kb on + strand at 1435.419 kb on - strand at 1435.419 kb on - strand at 1435.419 kb on - strand at 1435.421 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Dictyostellum sp.mixed culture-1 remove 1,431,923 + -0.6 1,431,923 + -0.5 1,431,923 + +0.1 1,431,923 + -0.1 1,431,923 + -0.6 1,431,923 + +0.3 1,431,924 - -0.2 1,431,924 - +0.4 1,431,924 - +0.2 1,431,956 + -1.3 1,431,956 + +0.6 1,431,956 + +0.3 1,431,957 - -0.5 1,431,957 - -1.5 1,431,957 - +0.1 1,432,817 - +1.8 1,432,817 - +1.1 1,432,847 + +0.8 1,432,938 + -1.2 1,432,938 + -0.6 1,433,375 + ABZR87_RS06745 0.33 -1.9 1,433,376 - ABZR87_RS06745 0.33 -1.6 1,433,376 - ABZR87_RS06745 0.33 +0.2 1,433,378 + ABZR87_RS06745 0.33 -0.5 1,433,378 + ABZR87_RS06745 0.33 -1.0 1,433,378 + ABZR87_RS06745 0.33 -0.5 1,433,378 + ABZR87_RS06745 0.33 -0.2 1,433,379 - ABZR87_RS06745 0.33 -0.2 1,433,379 - ABZR87_RS06745 0.33 +0.8 1,433,379 - ABZR87_RS06745 0.33 -1.2 1,433,381 + ABZR87_RS06745 0.33 -0.2 1,433,381 + ABZR87_RS06745 0.33 +0.6 1,433,382 - ABZR87_RS06745 0.33 +0.2 1,433,382 - ABZR87_RS06745 0.33 -1.1 1,433,528 + ABZR87_RS06745 0.42 -1.6 1,433,528 + ABZR87_RS06745 0.42 +1.8 1,433,528 + ABZR87_RS06745 0.42 -1.0 1,433,529 - ABZR87_RS06745 0.42 +0.2 1,433,529 - ABZR87_RS06745 0.42 +0.8 1,433,529 - ABZR87_RS06745 0.42 +0.2 1,433,529 - ABZR87_RS06745 0.42 -0.8 1,433,615 + ABZR87_RS06745 0.48 -0.2 1,433,615 + ABZR87_RS06745 0.48 -1.5 1,433,637 - ABZR87_RS06745 0.49 -2.4 1,433,637 - ABZR87_RS06745 0.49 -0.5 1,433,637 - ABZR87_RS06745 0.49 -1.0 1,433,637 - ABZR87_RS06745 0.49 -0.8 1,433,637 - ABZR87_RS06745 0.49 -0.8 1,433,957 + ABZR87_RS06745 0.69 +1.8 1,433,957 + ABZR87_RS06745 0.69 -1.0 1,433,957 + ABZR87_RS06745 0.69 -0.8 1,433,957 + ABZR87_RS06745 0.69 +0.2 1,433,958 - ABZR87_RS06745 0.69 -0.2 1,434,215 + ABZR87_RS06745 0.85 -1.2 1,434,215 + ABZR87_RS06745 0.85 +0.2 1,434,215 + ABZR87_RS06745 0.85 +0.8 1,434,216 - ABZR87_RS06745 0.85 +0.8 1,434,216 - ABZR87_RS06745 0.85 +0.2 1,434,296 + ABZR87_RS06745 0.90 -0.5 1,434,296 + ABZR87_RS06745 0.90 +0.2 1,434,403 + +1.5 1,434,404 - +0.6 1,434,488 + +0.8 1,434,488 + +0.1 1,434,488 + +0.2 1,434,488 + +1.8 1,434,488 + +1.6 1,434,488 + -0.5 1,434,488 + +0.2 1,434,488 + -1.0 1,434,488 + +0.4 1,434,489 - +0.7 1,434,489 - -0.5 1,434,489 - +0.5 1,434,489 - -1.0 1,434,489 - +1.1 1,434,489 - +0.2 1,434,489 - -0.2 1,434,492 + -0.5 1,434,492 + -0.5 1,434,492 + +1.8 1,434,492 + +0.8 1,434,492 + -0.8 1,434,492 + -1.2 1,434,493 - +1.1 1,434,493 - +1.0 1,434,493 - +1.6 1,434,493 - +0.2 1,434,493 - +1.2 1,434,493 - -2.9 1,434,493 - +0.7 1,434,493 - +1.1 1,434,493 - -1.0 1,434,544 + -0.5 1,434,544 + +0.2 1,434,544 + +0.0 1,434,544 + -0.3 1,434,544 + -2.1 1,434,544 + +0.6 1,434,544 + -0.9 1,434,545 - +0.2 1,434,545 - -0.4 1,434,545 - -0.3 1,434,545 - -0.5 1,434,545 - +1.1 1,434,545 - +0.3 1,434,545 - +0.7 1,434,545 - -0.4 1,434,546 + -0.4 1,434,546 + +0.0 1,434,546 + -0.3 1,434,546 + +0.1 1,434,547 - -0.2 1,434,547 - -0.3 1,434,547 - +0.2 1,434,547 - +1.2 1,434,547 - +1.1 1,434,547 - +0.1 1,434,547 - -0.9 1,434,582 + +0.5 1,434,583 - +0.5 1,434,649 - +0.8 1,434,649 - -0.2 1,434,649 - -0.1 1,434,649 - -2.0 1,434,649 - -2.3 1,434,649 - +2.3 1,435,384 + -0.2 1,435,385 - -0.1 1,435,385 - +0.1 1,435,385 - -0.4 1,435,385 - -1.4 1,435,385 - -1.3 1,435,385 - +0.2 1,435,414 - -1.3 1,435,414 - -0.4 1,435,414 - +0.2 1,435,414 - -0.5 1,435,418 + +1.3 1,435,418 + +0.6 1,435,418 + -0.5 1,435,418 + +0.0 1,435,419 - -0.6 1,435,419 - -0.3 1,435,419 - -0.0 1,435,421 - -0.3
Or see this region's nucleotide sequence