Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS06565

Experiment: Dictyostellum sp.mixed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dictyostellum sp.mixed culture-1
1,398,254	+		ABZR87_RS06560	0.56	+0.0
1,398,254	+		ABZR87_RS06560	0.56	+0.0
1,398,254	+		ABZR87_RS06560	0.56	-0.1
1,398,254	+		ABZR87_RS06560	0.56	-0.2
1,398,255	-		ABZR87_RS06560	0.56	-2.1
1,398,255	-		ABZR87_RS06560	0.56	-0.4
1,398,255	-		ABZR87_RS06560	0.56	+0.2
1,398,767	+		ABZR87_RS06560	0.89	-0.2
1,398,767	+		ABZR87_RS06560	0.89	+0.4
1,398,767	+		ABZR87_RS06560	0.89	-0.5
1,398,768	-		ABZR87_RS06560	0.89	-0.4
1,398,776	+				+0.4
1,398,776	+				-0.6
1,398,776	+				-0.6
1,398,776	+				-1.1
1,398,776	+				-1.0
1,398,776	+				-0.2
1,398,776	+				+0.5
1,398,777	-				-1.9
1,398,777	-				-0.8
1,398,777	-				+0.2
1,398,777	-				-0.9
1,398,777	-				+0.1
1,398,777	-				-0.4
1,398,803	+				-0.5
1,398,803	+				-0.8
1,398,803	+				-0.9
1,398,803	+				+0.3
1,398,854	+				-1.1
1,398,855	-				-1.5
1,398,875	+				-1.0
1,398,875	+				-0.4
1,398,875	+				-0.5
1,398,875	+				-2.9
1,398,875	+				-1.1
1,398,875	+				-0.2
1,398,875	+				-1.4
1,398,875	+				-0.3
1,398,875	+				-0.1
1,398,876	-				-0.7
1,398,876	-				-0.9
1,398,876	-				-0.3
1,398,876	-				-1.5
1,398,876	-				-1.2
1,398,876	-				+1.2
1,398,876	-				-1.0
1,398,876	-				-0.9
1,398,876	-				-0.9
1,398,961	+				-1.8
1,398,961	+				-1.1
1,398,962	-				-1.5
1,398,969	+				-0.7
1,398,969	+				-1.4
1,398,970	-				-2.2
1,398,970	-				-1.7
1,398,975	+				-0.8
1,398,975	+				-1.6
1,398,975	+				-1.1
1,398,975	+				-0.8
1,398,975	+				-2.0
1,398,975	+				-1.7
1,398,975	+				-0.3
1,398,975	+				-0.8
1,398,975	+				-1.4
1,398,975	+				-0.7
1,398,976	-				+0.2
1,398,976	-				-2.3
1,398,976	-				-1.1
1,398,976	-				-0.2
1,398,976	-				-0.9
1,398,976	-				-1.3
1,398,976	-				-0.9
1,399,119	+		ABZR87_RS06565	0.10	-0.4
1,399,140	+		ABZR87_RS06565	0.11	-0.3
1,399,140	+		ABZR87_RS06565	0.11	-1.4
1,399,140	+		ABZR87_RS06565	0.11	-0.4
1,399,140	+		ABZR87_RS06565	0.11	-0.9
1,399,140	+		ABZR87_RS06565	0.11	-0.4
1,399,140	+		ABZR87_RS06565	0.11	-0.4
1,399,141	-		ABZR87_RS06565	0.11	-1.2
1,399,141	-		ABZR87_RS06565	0.11	-1.1
1,399,141	-		ABZR87_RS06565	0.11	-0.2
1,399,141	-		ABZR87_RS06565	0.11	-1.4
1,399,152	+		ABZR87_RS06565	0.12	-1.4
1,399,152	+		ABZR87_RS06565	0.12	-1.6
1,399,152	+		ABZR87_RS06565	0.12	-1.3
1,399,153	-		ABZR87_RS06565	0.12	-1.0
1,399,272	+		ABZR87_RS06565	0.19	-0.7
1,399,273	-		ABZR87_RS06565	0.19	-0.1
1,399,273	-		ABZR87_RS06565	0.19	-1.0
1,399,314	+		ABZR87_RS06565	0.21	-0.8
1,399,314	+		ABZR87_RS06565	0.21	-1.5
1,399,314	+		ABZR87_RS06565	0.21	+0.4
1,399,314	+		ABZR87_RS06565	0.21	-1.5
1,399,314	+		ABZR87_RS06565	0.21	-1.5
1,399,315	-		ABZR87_RS06565	0.21	+0.1
1,399,315	-		ABZR87_RS06565	0.21	+0.3
1,399,315	-		ABZR87_RS06565	0.21	-0.9
1,399,315	-		ABZR87_RS06565	0.21	-1.3
1,399,315	-		ABZR87_RS06565	0.21	-1.0
1,399,315	-		ABZR87_RS06565	0.21	+0.6
1,399,315	-		ABZR87_RS06565	0.21	-0.5
1,399,333	-		ABZR87_RS06565	0.23	-1.1
1,399,333	-		ABZR87_RS06565	0.23	-1.3
1,399,353	+		ABZR87_RS06565	0.24	-1.2
1,399,353	+		ABZR87_RS06565	0.24	-2.0
1,399,353	+		ABZR87_RS06565	0.24	-1.9
1,399,353	+		ABZR87_RS06565	0.24	-2.0
1,399,354	-		ABZR87_RS06565	0.24	-1.2
1,399,354	-		ABZR87_RS06565	0.24	-1.6
1,399,354	-		ABZR87_RS06565	0.24	-1.0
1,399,354	-		ABZR87_RS06565	0.24	-0.8
1,399,354	-		ABZR87_RS06565	0.24	-2.4
1,399,354	-		ABZR87_RS06565	0.24	-0.1
1,399,470	-		ABZR87_RS06565	0.30	-0.6
1,399,572	+		ABZR87_RS06565	0.36	-1.6
1,399,572	+		ABZR87_RS06565	0.36	-1.5
1,399,572	+		ABZR87_RS06565	0.36	+0.4
1,399,572	+		ABZR87_RS06565	0.36	+1.0
1,399,572	+		ABZR87_RS06565	0.36	-0.9
1,399,573	-		ABZR87_RS06565	0.36	-1.0
1,399,573	-		ABZR87_RS06565	0.36	-0.7
1,399,573	-		ABZR87_RS06565	0.36	-0.5
1,399,573	-		ABZR87_RS06565	0.36	-1.1
1,399,863	+		ABZR87_RS06565	0.53	-1.0
1,399,863	+		ABZR87_RS06565	0.53	-1.1
1,399,863	+		ABZR87_RS06565	0.53	-2.8
1,399,863	+		ABZR87_RS06565	0.53	+0.9
1,399,863	+		ABZR87_RS06565	0.53	-1.3
1,399,864	-		ABZR87_RS06565	0.53	-0.5
1,399,864	-		ABZR87_RS06565	0.53	+0.6
1,399,864	-		ABZR87_RS06565	0.53	-1.9
1,399,864	-		ABZR87_RS06565	0.53	-1.3
1,399,864	-		ABZR87_RS06565	0.53	-1.0
1,399,864	-		ABZR87_RS06565	0.53	-0.9
1,399,864	-		ABZR87_RS06565	0.53	-1.9
1,399,864	-		ABZR87_RS06565	0.53	+0.2
1,399,864	-		ABZR87_RS06565	0.53	-3.7
1,399,864	-		ABZR87_RS06565	0.53	-1.8
1,399,864	-		ABZR87_RS06565	0.53	-1.2
1,399,872	+		ABZR87_RS06565	0.54	-0.7
1,399,872	+		ABZR87_RS06565	0.54	-2.9
1,399,872	+		ABZR87_RS06565	0.54	-1.1
1,399,899	+		ABZR87_RS06565	0.55	-1.2
1,399,917	+		ABZR87_RS06565	0.56	-1.3
1,399,917	+		ABZR87_RS06565	0.56	-0.5
1,399,917	+		ABZR87_RS06565	0.56	-1.7
1,399,918	-		ABZR87_RS06565	0.57	+0.5
1,399,918	-		ABZR87_RS06565	0.57	-1.2
1,399,918	-		ABZR87_RS06565	0.57	-1.7
1,399,947	+		ABZR87_RS06565	0.58	-2.1
1,399,947	+		ABZR87_RS06565	0.58	-0.2
1,399,947	+		ABZR87_RS06565	0.58	-1.1
1,399,947	+		ABZR87_RS06565	0.58	+0.2
1,399,947	+		ABZR87_RS06565	0.58	-0.9
1,399,947	+		ABZR87_RS06565	0.58	-0.8
1,399,947	+		ABZR87_RS06565	0.58	-1.4
1,399,947	+		ABZR87_RS06565	0.58	-0.0
1,399,947	+		ABZR87_RS06565	0.58	+0.5
1,399,948	-		ABZR87_RS06565	0.58	-2.1
1,399,948	-		ABZR87_RS06565	0.58	+1.0
1,399,948	-		ABZR87_RS06565	0.58	-0.8
1,399,948	-		ABZR87_RS06565	0.58	+0.5
1,399,948	-		ABZR87_RS06565	0.58	-3.5
1,399,948	-		ABZR87_RS06565	0.58	-0.8
1,399,948	-		ABZR87_RS06565	0.58	-1.4
1,400,040	+		ABZR87_RS06565	0.64	-1.5
1,400,041	-		ABZR87_RS06565	0.64	+0.2
1,400,067	+		ABZR87_RS06565	0.65	-1.0
1,400,067	+		ABZR87_RS06565	0.65	-2.1
1,400,067	+		ABZR87_RS06565	0.65	+0.7
1,400,068	-		ABZR87_RS06565	0.65	-0.8
1,400,068	-		ABZR87_RS06565	0.65	-0.5
1,400,068	-		ABZR87_RS06565	0.65	+0.5
1,400,142	+		ABZR87_RS06565	0.70	-0.2
1,400,142	+		ABZR87_RS06565	0.70	-2.2
1,400,143	-		ABZR87_RS06565	0.70	-0.4
1,400,196	+		ABZR87_RS06565	0.73	-0.6
1,400,196	+		ABZR87_RS06565	0.73	+0.0
1,400,196	+		ABZR87_RS06565	0.73	-1.4
1,400,196	+		ABZR87_RS06565	0.73	-0.7
1,400,196	+		ABZR87_RS06565	0.73	-1.5
1,400,196	+		ABZR87_RS06565	0.73	-1.8
1,400,196	+		ABZR87_RS06565	0.73	+1.0
1,400,196	+		ABZR87_RS06565	0.73	-0.9
1,400,196	+		ABZR87_RS06565	0.73	-0.3
1,400,196	+		ABZR87_RS06565	0.73	-0.4
1,400,196	+		ABZR87_RS06565	0.73	+0.3
1,400,196	+		ABZR87_RS06565	0.73	-1.0
1,400,197	-		ABZR87_RS06565	0.73	-0.6
1,400,197	-		ABZR87_RS06565	0.73	-0.5
1,400,197	-		ABZR87_RS06565	0.73	-0.1
1,400,197	-		ABZR87_RS06565	0.73	-0.0
1,400,197	-		ABZR87_RS06565	0.73	-2.7
1,400,239	+		ABZR87_RS06565	0.75	+1.0
1,400,239	+		ABZR87_RS06565	0.75	-1.4
1,400,240	-		ABZR87_RS06565	0.75	-0.6
1,400,240	-		ABZR87_RS06565	0.75	-4.0
1,400,240	-		ABZR87_RS06565	0.75	-0.8
1,400,240	-		ABZR87_RS06565	0.75	+1.2
1,400,284	-		ABZR87_RS06565	0.78	-1.0
1,400,284	-		ABZR87_RS06565	0.78	-0.8
1,400,317	+		ABZR87_RS06565	0.80	-0.4
1,400,317	+		ABZR87_RS06565	0.80	-1.8
1,400,317	+		ABZR87_RS06565	0.80	+0.2
1,400,318	-		ABZR87_RS06565	0.80	-1.3
1,400,318	-		ABZR87_RS06565	0.80	-1.5
1,400,318	-		ABZR87_RS06565	0.80	-1.4
1,400,318	-		ABZR87_RS06565	0.80	-1.3
1,400,595	+				-0.6
1,400,595	+				-1.4
1,400,595	+				-0.6
1,400,595	+				-1.2
1,400,595	+				-0.6
1,400,595	+				-1.1
1,400,595	+				-1.5
1,400,595	+				-1.6
1,400,595	+				-1.1
1,400,595	+				-0.6
1,400,595	+				-0.0
1,400,595	+				-1.2
1,400,596	-				-1.2
1,400,596	-				-1.6
1,400,596	-				-0.4
1,400,596	-				-0.5
1,400,596	-				-1.5
1,400,596	-				+0.1
1,400,596	-				-1.3
1,400,596	-				-1.1
1,400,596	-				-1.2
1,400,798	+		ABZR87_RS06570	0.16	-2.6
1,400,798	+		ABZR87_RS06570	0.16	-1.2
1,400,798	+		ABZR87_RS06570	0.16	-0.8
1,400,799	-		ABZR87_RS06570	0.16	-0.8
1,400,799	-		ABZR87_RS06570	0.16	+0.2
1,400,799	-		ABZR87_RS06570	0.16	-0.7
1,400,799	-		ABZR87_RS06570	0.16	-0.7
1,400,799	-		ABZR87_RS06570	0.16	-0.2
1,400,799	-		ABZR87_RS06570	0.16	-0.9
1,400,799	-		ABZR87_RS06570	0.16	-1.3
1,400,799	-		ABZR87_RS06570	0.16	-0.7
1,400,799	-		ABZR87_RS06570	0.16	-0.6
1,400,799	-		ABZR87_RS06570	0.16	-0.6
1,400,799	-		ABZR87_RS06570	0.16	-1.3
1,400,799	-		ABZR87_RS06570	0.16	-1.5
1,400,858	+		ABZR87_RS06570	0.24	-2.0
1,400,858	+		ABZR87_RS06570	0.24	-2.2
1,400,858	+		ABZR87_RS06570	0.24	-0.6
1,400,858	+		ABZR87_RS06570	0.24	-0.9
1,400,859	-		ABZR87_RS06570	0.24	-0.6
1,400,879	+		ABZR87_RS06570	0.26	-0.5
1,400,880	-		ABZR87_RS06570	0.26	-0.6
1,400,880	-		ABZR87_RS06570	0.26	-0.5
1,400,948	+		ABZR87_RS06570	0.35	-0.3
1,400,948	+		ABZR87_RS06570	0.35	+0.4
1,400,948	+		ABZR87_RS06570	0.35	+1.8
1,400,948	+		ABZR87_RS06570	0.35	-0.6
1,400,948	+		ABZR87_RS06570	0.35	+0.4
1,400,949	-		ABZR87_RS06570	0.35	-1.3
1,400,949	-		ABZR87_RS06570	0.35	-0.2
1,400,949	-		ABZR87_RS06570	0.35	-0.2
1,400,957	+		ABZR87_RS06570	0.36	+0.7
1,400,958	-		ABZR87_RS06570	0.36	+0.8
1,401,002	+		ABZR87_RS06570	0.41	+0.8
1,401,003	-		ABZR87_RS06570	0.42	+0.3
1,401,003	-		ABZR87_RS06570	0.42	-2.0
1,401,014	+		ABZR87_RS06570	0.43	-1.2
1,401,014	+		ABZR87_RS06570	0.43	-0.4
1,401,029	+		ABZR87_RS06570	0.45	-0.0
1,401,065	+		ABZR87_RS06570	0.49	+0.2
1,401,071	+		ABZR87_RS06570	0.50	-1.2
1,401,140	+		ABZR87_RS06570	0.59	-1.3
1,401,140	+		ABZR87_RS06570	0.59	-0.4
1,401,141	-		ABZR87_RS06570	0.59	-1.1
1,401,141	-		ABZR87_RS06570	0.59	-2.0
1,401,203	+		ABZR87_RS06570	0.66	-0.7
1,401,203	+		ABZR87_RS06570	0.66	-1.2
1,401,204	-		ABZR87_RS06570	0.66	-1.5
1,401,204	-		ABZR87_RS06570	0.66	-1.2
1,401,302	-		ABZR87_RS06570	0.79	-0.2
1,401,309	-		ABZR87_RS06570	0.79	-1.8
1,401,386	+		ABZR87_RS06570	0.89	-0.5
1,401,386	+		ABZR87_RS06570	0.89	-0.5
1,401,496	-				-0.0
1,401,496	-				+0.6
1,401,558	+				+0.8
1,401,558	+				+0.4
1,401,558	+				-0.1
1,401,558	+				-0.4
1,401,592	+		ABZR87_RS06575	0.17	+1.3
1,401,592	+		ABZR87_RS06575	0.17	-0.3
1,401,592	+		ABZR87_RS06575	0.17	+0.7
1,401,593	-		ABZR87_RS06575	0.17	+0.0
1,401,593	-		ABZR87_RS06575	0.17	+0.4
1,401,593	-		ABZR87_RS06575	0.17	-0.1
1,401,627	+		ABZR87_RS06575	0.28	+1.1
1,401,627	+		ABZR87_RS06575	0.28	+0.8
1,401,627	+		ABZR87_RS06575	0.28	+1.4
1,401,627	+		ABZR87_RS06575	0.28	-0.3
1,401,627	+		ABZR87_RS06575	0.28	-0.0
1,401,627	+		ABZR87_RS06575	0.28	+0.0
1,401,627	+		ABZR87_RS06575	0.28	-1.9
1,401,627	+		ABZR87_RS06575	0.28	-0.1
1,401,627	+		ABZR87_RS06575	0.28	+0.1
1,401,627	+		ABZR87_RS06575	0.28	+0.7
1,401,627	+		ABZR87_RS06575	0.28	-0.3
1,401,628	-		ABZR87_RS06575	0.29	+1.4
1,401,628	-		ABZR87_RS06575	0.29	+0.8
1,401,628	-		ABZR87_RS06575	0.29	+0.1
1,401,628	-		ABZR87_RS06575	0.29	-0.3
1,401,628	-		ABZR87_RS06575	0.29	-1.3
1,401,628	-		ABZR87_RS06575	0.29	-0.2
1,401,628	-		ABZR87_RS06575	0.29	-0.8