Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS06030

Experiment: Dictyostellum sp.mixed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dictyostellum sp.mixed culture-1
1,285,159	-				+0.5
1,285,159	-				+0.3
1,285,170	+		ABZR87_RS06025	0.10	-0.0
1,285,170	+		ABZR87_RS06025	0.10	-0.8
1,285,170	+		ABZR87_RS06025	0.10	+0.4
1,285,170	+		ABZR87_RS06025	0.10	-0.6
1,285,170	+		ABZR87_RS06025	0.10	-0.4
1,285,170	+		ABZR87_RS06025	0.10	-0.5
1,285,171	-		ABZR87_RS06025	0.10	-0.1
1,285,171	-		ABZR87_RS06025	0.10	-0.4
1,285,171	-		ABZR87_RS06025	0.10	-1.3
1,285,291	+		ABZR87_RS06025	0.23	-0.7
1,285,291	+		ABZR87_RS06025	0.23	-1.0
1,285,291	+		ABZR87_RS06025	0.23	-0.1
1,285,292	-		ABZR87_RS06025	0.23	-2.0
1,285,292	-		ABZR87_RS06025	0.23	-3.2
1,285,458	+		ABZR87_RS06025	0.40	+0.3
1,285,479	+		ABZR87_RS06025	0.42	-0.4
1,285,479	+		ABZR87_RS06025	0.42	-1.1
1,285,480	-		ABZR87_RS06025	0.42	+0.5
1,285,480	-		ABZR87_RS06025	0.42	+1.7
1,285,480	-		ABZR87_RS06025	0.42	-1.2
1,285,480	-		ABZR87_RS06025	0.42	-0.4
1,285,480	-		ABZR87_RS06025	0.42	-1.3
1,285,480	-		ABZR87_RS06025	0.42	-0.5
1,285,480	-		ABZR87_RS06025	0.42	-0.1
1,285,515	-		ABZR87_RS06025	0.45	-1.2
1,285,530	+		ABZR87_RS06025	0.47	-1.3
1,285,531	-		ABZR87_RS06025	0.47	-0.1
1,285,531	-		ABZR87_RS06025	0.47	+1.3
1,285,531	-		ABZR87_RS06025	0.47	-1.1
1,285,531	-		ABZR87_RS06025	0.47	+0.1
1,285,531	-		ABZR87_RS06025	0.47	-0.7
1,285,531	-		ABZR87_RS06025	0.47	-0.4
1,285,575	+		ABZR87_RS06025	0.51	-0.7
1,285,575	+		ABZR87_RS06025	0.51	+0.7
1,285,576	-		ABZR87_RS06025	0.52	-0.1
1,285,746	+		ABZR87_RS06025	0.69	+0.8
1,285,746	+		ABZR87_RS06025	0.69	-0.2
1,285,746	+		ABZR87_RS06025	0.69	-0.8
1,285,747	-		ABZR87_RS06025	0.69	-0.1
1,285,747	-		ABZR87_RS06025	0.69	-0.3
1,285,749	+		ABZR87_RS06025	0.69	-1.0
1,285,749	+		ABZR87_RS06025	0.69	+0.2
1,285,749	+		ABZR87_RS06025	0.69	+0.4
1,285,749	+		ABZR87_RS06025	0.69	-0.8
1,285,750	-		ABZR87_RS06025	0.69	-0.4
1,285,750	-		ABZR87_RS06025	0.69	-0.7
1,285,750	-		ABZR87_RS06025	0.69	-1.2
1,285,864	-		ABZR87_RS06025	0.81	-0.8
1,285,872	+		ABZR87_RS06025	0.82	-0.8
1,285,873	-		ABZR87_RS06025	0.82	+0.0
1,285,873	-		ABZR87_RS06025	0.82	-0.9
1,286,229	+				-3.0
1,286,229	+				-0.5
1,286,230	-				-0.8
1,286,230	-				-1.4
1,286,230	-				-0.1
1,286,230	-				+1.3
1,286,341	-		ABZR87_RS06030	0.25	-0.6
1,286,862	+				-1.4
1,286,862	+				-2.8
1,286,862	+				+0.6
1,286,862	+				-0.4
1,286,863	-				-0.3
1,286,863	-				-0.9
1,286,863	-				-2.6
1,286,896	+				+0.2
1,286,897	-				+1.0
1,286,897	-				-1.0
1,286,897	-				+0.4
1,286,897	-				-0.8
1,286,921	+				+0.2
1,287,087	+				+0.4
1,287,088	-				+0.0
1,287,099	+		ABZR87_RS06035	0.12	+0.2
1,287,138	+		ABZR87_RS06035	0.23	+0.3
1,287,138	+		ABZR87_RS06035	0.23	-0.2
1,287,186	+		ABZR87_RS06035	0.36	+0.3
1,287,186	+		ABZR87_RS06035	0.36	+0.2
1,287,187	-		ABZR87_RS06035	0.37	-0.4
1,287,187	-		ABZR87_RS06035	0.37	-1.3
1,287,189	+		ABZR87_RS06035	0.37	-2.1
1,287,189	+		ABZR87_RS06035	0.37	+0.3
1,287,189	+		ABZR87_RS06035	0.37	+0.3
1,287,190	-		ABZR87_RS06035	0.38	-0.1
1,287,190	-		ABZR87_RS06035	0.38	-0.4
1,287,190	-		ABZR87_RS06035	0.38	+0.4
1,287,207	+		ABZR87_RS06035	0.42	-0.4
1,287,207	+		ABZR87_RS06035	0.42	-0.2
1,287,207	+		ABZR87_RS06035	0.42	+0.9
1,287,207	+		ABZR87_RS06035	0.42	-0.1
1,287,208	-		ABZR87_RS06035	0.43	-1.0
1,287,208	-		ABZR87_RS06035	0.43	+1.3
1,287,208	-		ABZR87_RS06035	0.43	-1.0
1,287,273	+		ABZR87_RS06035	0.61	-0.2
1,287,273	+		ABZR87_RS06035	0.61	+0.4
1,287,273	+		ABZR87_RS06035	0.61	-0.3
1,287,273	+		ABZR87_RS06035	0.61	+0.6
1,287,273	+		ABZR87_RS06035	0.61	-0.5
1,287,273	+		ABZR87_RS06035	0.61	-0.4
1,287,273	+		ABZR87_RS06035	0.61	-0.3
1,287,273	+		ABZR87_RS06035	0.61	+0.4
1,287,273	+		ABZR87_RS06035	0.61	+0.1
1,287,273	+		ABZR87_RS06035	0.61	+0.2
1,287,273	+		ABZR87_RS06035	0.61	+0.6
1,287,274	-		ABZR87_RS06035	0.61	+0.7
1,287,274	-		ABZR87_RS06035	0.61	-0.2
1,287,274	-		ABZR87_RS06035	0.61	+0.4
1,287,274	-		ABZR87_RS06035	0.61	-0.9
1,287,274	-		ABZR87_RS06035	0.61	-1.4
1,287,274	-		ABZR87_RS06035	0.61	-0.4
1,287,454	+				+1.0
1,287,454	+				-1.5
1,287,454	+				+0.3
1,287,454	+				-0.8
1,287,499	-				+0.7
1,287,499	-				-0.5
1,287,499	-				+0.1
1,287,499	-				-0.2
1,287,612	+				+0.3
1,287,612	+				-0.1
1,287,613	-				-0.3
1,287,613	-				-0.2
1,287,613	-				+0.2
1,287,613	-				+2.3
1,287,613	-				+1.0
1,287,815	-		ABZR87_RS06040	0.26	+1.0