Experiment: Dictyostellum sp.mixed culture-1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS05370 and ABZR87_RS05375 are separated by 62 nucleotides ABZR87_RS05375 and ABZR87_RS05380 are separated by 629 nucleotides ABZR87_RS05380 and ABZR87_RS05385 are separated by 276 nucleotides
ABZR87_RS05370: ABZR87_RS05370 - ribonuclease P protein component, at 1,130,390 to 1,130,812
_RS05370
ABZR87_RS05375: ABZR87_RS05375 - 50S ribosomal protein L34, at 1,130,875 to 1,131,009
_RS05375
ABZR87_RS05380: ABZR87_RS05380 - chromosomal replication initiator protein DnaA, at 1,131,639 to 1,133,228
_RS05380
ABZR87_RS05385: ABZR87_RS05385 - DNA polymerase III subunit beta, at 1,133,505 to 1,134,620
_RS05385
Position (kb)
1131
1132
1133
1134 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1130.876 kb on + strand at 1130.876 kb on + strand at 1130.876 kb on + strand at 1130.876 kb on + strand at 1130.876 kb on + strand at 1131.129 kb on - strand at 1131.129 kb on - strand at 1131.129 kb on - strand at 1131.129 kb on - strand at 1131.144 kb on - strand at 1131.144 kb on - strand at 1131.144 kb on - strand at 1131.144 kb on - strand at 1131.433 kb on + strand at 1131.453 kb on + strand at 1131.454 kb on - strand at 1131.454 kb on - strand at 1131.487 kb on + strand at 1131.501 kb on - strand at 1131.517 kb on + strand at 1131.518 kb on - strand at 1131.518 kb on - strand at 1131.518 kb on - strand at 1131.628 kb on + strand at 1131.628 kb on + strand at 1131.628 kb on + strand at 1133.325 kb on + strand at 1133.325 kb on + strand at 1133.325 kb on + strand at 1133.325 kb on + strand at 1133.326 kb on - strand at 1133.331 kb on + strand at 1133.331 kb on + strand at 1133.331 kb on + strand at 1133.331 kb on + strand at 1133.331 kb on + strand at 1133.331 kb on + strand at 1133.331 kb on + strand at 1133.331 kb on + strand at 1133.331 kb on + strand at 1133.331 kb on + strand at 1133.332 kb on - strand at 1133.332 kb on - strand at 1133.332 kb on - strand at 1133.332 kb on - strand at 1133.332 kb on - strand at 1133.332 kb on - strand at 1133.332 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Dictyostellum sp.mixed culture-1 remove 1,130,876 + -0.9 1,130,876 + +0.7 1,130,876 + +0.2 1,130,876 + -1.0 1,130,876 + +1.1 1,131,129 - +0.4 1,131,129 - -0.9 1,131,129 - -0.6 1,131,129 - +0.0 1,131,144 - -0.7 1,131,144 - -0.5 1,131,144 - +0.1 1,131,144 - -0.0 1,131,433 + -0.8 1,131,453 + -0.4 1,131,454 - +0.4 1,131,454 - +0.1 1,131,487 + -0.1 1,131,501 - -1.1 1,131,517 + -0.5 1,131,518 - -0.5 1,131,518 - +0.3 1,131,518 - -0.3 1,131,628 + +0.0 1,131,628 + -1.3 1,131,628 + +1.7 1,133,325 + +0.2 1,133,325 + -0.5 1,133,325 + -0.1 1,133,325 + -0.3 1,133,326 - -1.1 1,133,331 + -1.5 1,133,331 + +1.1 1,133,331 + -0.1 1,133,331 + +0.6 1,133,331 + -0.1 1,133,331 + +0.7 1,133,331 + +0.2 1,133,331 + -1.1 1,133,331 + +0.0 1,133,331 + -0.7 1,133,332 - -0.5 1,133,332 - -2.5 1,133,332 - -2.8 1,133,332 - -0.6 1,133,332 - -0.6 1,133,332 - -2.6 1,133,332 - -0.3
Or see this region's nucleotide sequence