Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS25305

Experiment: Glucose (C) and Ammonium chloride (N); with MOPS; with chloride

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Glucose (C) and Ammonium chloride (N); with MOPS; with chloride
5,654,373	-		PFLU_RS25295	0.81	+0.7
5,654,373	-		PFLU_RS25295	0.81	+1.7
5,654,373	-		PFLU_RS25295	0.81	-0.3
5,654,392	-		PFLU_RS25295	0.83	-1.3
5,654,515	+				-0.4
5,654,516	-				-0.6
5,654,516	-				+1.8
5,654,516	-				+2.1
5,654,525	+				-0.6
5,654,525	+				-0.2
5,654,525	+				+1.5
5,654,525	+				+0.9
5,654,525	+				+0.4
5,654,525	+				-0.1
5,654,525	+				+2.6
5,654,526	-				-1.0
5,654,526	-				+1.5
5,654,526	-				+1.4
5,654,526	-				+2.5
5,654,526	-				+2.9
5,654,526	-				+1.5
5,654,526	-				+0.1
5,654,566	-				+1.3
5,654,602	+				-2.2
5,654,624	+				-0.1
5,654,624	+				-1.8
5,654,624	+				-1.8
5,654,625	-				+4.8
5,654,625	-				+1.7
5,654,625	-				+1.6
5,654,625	-				+0.4
5,654,625	-				+0.6
5,654,625	-				+2.0
5,654,625	-				+0.1
5,654,643	+				-1.0
5,654,643	+				-0.4
5,654,643	+				-0.7
5,654,643	+				-1.3
5,654,643	+				+1.4
5,654,644	-				-2.6
5,654,660	+				-2.6
5,654,661	-				+0.6
5,654,664	+				+0.8
5,654,674	-				-0.2
5,654,685	-				-3.0
5,654,723	+				+1.2
5,654,723	+				+1.2
5,654,723	+				-0.6
5,654,723	+				-0.5
5,654,724	-				-1.6
5,654,724	-				+2.0
5,654,724	-				+0.8
5,654,733	+				-0.0
5,654,733	+				+1.9
5,654,733	+				-0.6
5,654,733	+				-3.0
5,654,733	+				+1.5
5,654,733	+				-1.6
5,654,733	+				+2.9
5,654,733	+				+2.0
5,654,733	+				-1.6
5,654,733	+				+0.9
5,654,733	+				+1.6
5,654,734	-				-2.8
5,654,734	-				+0.6
5,654,734	-				+2.5
5,654,734	-				+0.6
5,654,734	-				-2.3
5,654,734	-				-2.5
5,654,734	-				-0.8
5,654,734	-				-0.8
5,654,734	-				-0.9
5,654,744	+				-0.1
5,654,744	+				-0.1
5,654,744	+				-0.9
5,654,744	+				-1.9
5,654,744	+				-0.6
5,654,744	+				+0.8
5,654,744	+				+2.0
5,654,745	-				-1.5
5,654,745	-				-0.3
5,654,745	-				+0.3
5,654,745	-				+0.0
5,654,745	-				+1.7
5,654,745	-				+3.2
5,654,745	-				+0.2
5,654,745	-				-0.6
5,654,853	+		PFLU_RS25300	0.20	-0.7
5,654,854	-		PFLU_RS25300	0.20	+1.5
5,654,854	-		PFLU_RS25300	0.20	+1.5
5,654,854	-		PFLU_RS25300	0.20	-0.4
5,654,854	-		PFLU_RS25300	0.20	-1.1
5,654,854	-		PFLU_RS25300	0.20	+0.6
5,654,869	+		PFLU_RS25300	0.23	-1.6
5,654,869	+		PFLU_RS25300	0.23	-2.2
5,654,870	-		PFLU_RS25300	0.23	+0.3
5,654,870	-		PFLU_RS25300	0.23	+1.8
5,654,966	+		PFLU_RS25300	0.40	-0.6
5,654,966	+		PFLU_RS25300	0.40	+2.6
5,654,967	-		PFLU_RS25300	0.41	+0.4
5,654,967	-		PFLU_RS25300	0.41	-0.6
5,655,019	+		PFLU_RS25300	0.50	-0.8
5,655,194	+		PFLU_RS25300	0.81	+1.5
5,655,195	-		PFLU_RS25300	0.81	+1.1
5,655,210	+		PFLU_RS25300	0.84	-2.6
5,655,210	+		PFLU_RS25300	0.84	-0.7
5,655,211	-		PFLU_RS25300	0.84	-1.9
5,655,211	-		PFLU_RS25300	0.84	-0.4
5,655,301	+				-1.3
5,655,302	-				-2.2
5,655,302	-				+1.6
5,655,302	-				+1.6
5,655,323	+				-0.1
5,655,324	-				+2.0
5,655,324	-				-2.4
5,655,324	-				-0.9
5,655,325	+				-1.5
5,655,325	+				+0.4
5,655,325	+				+2.6
5,655,325	+				-0.0
5,655,325	+				-0.5
5,655,325	+				+0.2
5,655,325	+				+0.5
5,655,325	+				+0.4
5,655,325	+				+2.0
5,655,325	+				-0.4
5,655,326	-				-0.8
5,655,326	-				+0.8
5,655,326	-				-0.1
5,655,326	-				-2.4
5,655,326	-				+0.1
5,655,326	-				+1.9
5,655,326	-				-1.3
5,655,326	-				+0.9
5,655,326	-				-2.1
5,655,326	-				-1.0
5,655,326	-				+2.1
5,655,484	+		PFLU_RS25305	0.18	-1.8
5,655,484	+		PFLU_RS25305	0.18	-0.8
5,655,484	+		PFLU_RS25305	0.18	-0.4
5,655,484	+		PFLU_RS25305	0.18	+0.6
5,655,484	+		PFLU_RS25305	0.18	-0.4
5,655,484	+		PFLU_RS25305	0.18	-1.1
5,655,484	+		PFLU_RS25305	0.18	+0.6
5,655,485	-		PFLU_RS25305	0.18	-0.1
5,655,485	-		PFLU_RS25305	0.18	-2.2
5,655,485	-		PFLU_RS25305	0.18	-1.5
5,655,485	-		PFLU_RS25305	0.18	-3.0
5,655,485	-		PFLU_RS25305	0.18	-0.6
5,655,485	-		PFLU_RS25305	0.18	-1.1
5,655,520	-		PFLU_RS25305	0.23	-0.9
5,655,520	-		PFLU_RS25305	0.23	-2.4
5,655,520	-		PFLU_RS25305	0.23	-2.3
5,655,520	-		PFLU_RS25305	0.23	+2.1
5,655,520	-		PFLU_RS25305	0.23	-2.1
5,655,673	+		PFLU_RS25305	0.44	-0.1
5,655,673	+		PFLU_RS25305	0.44	+0.6
5,655,673	+		PFLU_RS25305	0.44	-1.3
5,655,673	+		PFLU_RS25305	0.44	-1.1
5,655,673	+		PFLU_RS25305	0.44	+1.4
5,655,673	+		PFLU_RS25305	0.44	-2.6
5,655,673	+		PFLU_RS25305	0.44	-0.1
5,655,673	+		PFLU_RS25305	0.44	-2.9
5,655,673	+		PFLU_RS25305	0.44	+1.4
5,655,673	+		PFLU_RS25305	0.44	+1.3
5,655,674	-		PFLU_RS25305	0.45	-0.8
5,655,674	-		PFLU_RS25305	0.45	-0.6
5,655,674	-		PFLU_RS25305	0.45	-1.5
5,655,674	-		PFLU_RS25305	0.45	-3.2
5,655,674	-		PFLU_RS25305	0.45	-1.5
5,655,674	-		PFLU_RS25305	0.45	-1.6
5,655,691	-		PFLU_RS25305	0.47	-1.3
5,655,752	+		PFLU_RS25305	0.56	-1.0
5,655,752	+		PFLU_RS25305	0.56	-1.4
5,655,753	-		PFLU_RS25305	0.56	+1.6
5,655,753	-		PFLU_RS25305	0.56	+1.5
5,655,753	-		PFLU_RS25305	0.56	-0.6
5,655,799	-		PFLU_RS25305	0.62	-2.4
5,655,937	+		PFLU_RS25305	0.82	-1.5
5,655,984	+		PFLU_RS25305	0.88	-1.1
5,655,984	+		PFLU_RS25305	0.88	-1.7
5,655,984	+		PFLU_RS25305	0.88	-2.5
5,655,984	+		PFLU_RS25305	0.88	-1.0
5,655,984	+		PFLU_RS25305	0.88	-2.2
5,655,985	-		PFLU_RS25305	0.88	+0.3
5,655,985	-		PFLU_RS25305	0.88	-2.5
5,655,985	-		PFLU_RS25305	0.88	-1.8
5,655,999	+				-0.1
5,656,000	-				+0.2
5,656,017	+				+2.6
5,656,017	+				-1.3
5,656,017	+				-1.1
5,656,017	+				-3.1
5,656,017	+				-1.1
5,656,018	-				-1.3
5,656,018	-				-0.9
5,656,018	-				-1.3
5,656,018	-				-1.5
5,656,018	-				+3.3
5,656,018	-				-1.1
5,656,018	-				-1.5
5,656,018	-				+0.1
5,656,018	-				-1.3
5,656,018	-				-3.1
5,656,018	-				+2.8
5,656,028	+				-1.3
5,656,029	-				-0.4
5,656,029	-				+1.0
5,656,058	+				-1.3
5,656,058	+				-1.0
5,656,058	+				-0.4
5,656,059	-				-1.6
5,656,059	-				-1.1
5,656,059	-				-1.8
5,656,059	-				-2.1
5,656,059	-				-1.1
5,656,066	-				+0.2
5,656,066	-				+3.2
5,656,066	-				-2.3
5,656,066	-				-2.9
5,656,066	-				+0.4
5,656,066	-				+1.8
5,656,087	+				+2.0
5,656,087	+				+1.3
5,656,087	+				-0.1
5,656,087	+				+1.0
5,656,087	+				-0.5
5,656,087	+				+0.1
5,656,087	+				-1.0
5,656,087	+				-1.3
5,656,087	+				+1.3
5,656,087	+				-2.0
5,656,087	+				+2.2
5,656,087	+				+2.8
5,656,087	+				+1.0
5,656,087	+				+2.6
5,656,087	+				-0.1
5,656,087	+				+0.9
5,656,087	+				+1.7
5,656,088	-				+2.6
5,656,088	-				-1.2
5,656,088	-				-1.8
5,656,088	-				-0.3
5,656,088	-				-0.6
5,656,088	-				+2.0
5,656,088	-				-2.0
5,656,088	-				-0.4
5,656,088	-				+2.0
5,656,088	-				+3.0
5,656,088	-				+1.6
5,656,088	-				-2.1
5,656,088	-				-0.0
5,656,088	-				+1.8
5,656,088	-				-3.2
5,656,088	-				+3.0
5,656,088	-				-0.8
5,656,088	-				+1.3
5,656,088	-				-3.5
5,656,088	-				+0.1
5,656,088	-				+0.7
5,656,088	-				-1.0
5,656,088	-				-1.4
5,656,199	+		PFLU_RS25310	0.20	+0.2
5,656,199	+		PFLU_RS25310	0.20	+2.8
5,656,199	+		PFLU_RS25310	0.20	-0.5
5,656,199	+		PFLU_RS25310	0.20	+0.2
5,656,199	+		PFLU_RS25310	0.20	+1.2
5,656,199	+		PFLU_RS25310	0.20	+0.7
5,656,199	+		PFLU_RS25310	0.20	+0.2
5,656,199	+		PFLU_RS25310	0.20	+0.6
5,656,199	+		PFLU_RS25310	0.20	-0.4
5,656,199	+		PFLU_RS25310	0.20	+0.8
5,656,200	-		PFLU_RS25310	0.20	-0.4
5,656,200	-		PFLU_RS25310	0.20	+0.7
5,656,200	-		PFLU_RS25310	0.20	+0.7
5,656,200	-		PFLU_RS25310	0.20	+0.4
5,656,200	-		PFLU_RS25310	0.20	-2.0
5,656,200	-		PFLU_RS25310	0.20	-0.3
5,656,200	-		PFLU_RS25310	0.20	-0.2
5,656,214	+		PFLU_RS25310	0.22	-1.4
5,656,214	+		PFLU_RS25310	0.22	-0.1
5,656,214	+		PFLU_RS25310	0.22	-1.6
5,656,255	+		PFLU_RS25310	0.30	+0.7
5,656,255	+		PFLU_RS25310	0.30	+0.2
5,656,256	-		PFLU_RS25310	0.30	-2.7
5,656,256	-		PFLU_RS25310	0.30	-1.1
5,656,256	-		PFLU_RS25310	0.30	+3.7
5,656,256	-		PFLU_RS25310	0.30	+0.5
5,656,301	+		PFLU_RS25310	0.38	+3.0
5,656,302	-		PFLU_RS25310	0.38	-1.9
5,656,302	-		PFLU_RS25310	0.38	-0.4
5,656,302	-		PFLU_RS25310	0.38	-0.4
5,656,334	-		PFLU_RS25310	0.44	+0.2
5,656,355	+		PFLU_RS25310	0.48	+3.8
5,656,355	+		PFLU_RS25310	0.48	-1.8
5,656,355	+		PFLU_RS25310	0.48	+1.9
5,656,355	+		PFLU_RS25310	0.48	-0.4
5,656,355	+		PFLU_RS25310	0.48	-0.3
5,656,355	+		PFLU_RS25310	0.48	-2.1
5,656,355	+		PFLU_RS25310	0.48	+1.9
5,656,355	+		PFLU_RS25310	0.48	+0.2
5,656,355	+		PFLU_RS25310	0.48	+1.5
5,656,356	-		PFLU_RS25310	0.48	-1.9
5,656,356	-		PFLU_RS25310	0.48	+1.4
5,656,356	-		PFLU_RS25310	0.48	+1.6
5,656,356	-		PFLU_RS25310	0.48	-1.0
5,656,356	-		PFLU_RS25310	0.48	-1.5
5,656,356	-		PFLU_RS25310	0.48	+0.2
5,656,356	-		PFLU_RS25310	0.48	+3.2
5,656,356	-		PFLU_RS25310	0.48	-2.4
5,656,356	-		PFLU_RS25310	0.48	-1.9
5,656,357	+		PFLU_RS25310	0.48	-1.5
5,656,357	+		PFLU_RS25310	0.48	+0.9
5,656,357	+		PFLU_RS25310	0.48	+1.4
5,656,358	-		PFLU_RS25310	0.48	+2.3
5,656,358	-		PFLU_RS25310	0.48	-3.1
5,656,358	-		PFLU_RS25310	0.48	+2.0
5,656,358	-		PFLU_RS25310	0.48	+0.6
5,656,358	-		PFLU_RS25310	0.48	+3.2
5,656,358	-		PFLU_RS25310	0.48	+0.9
5,656,374	+		PFLU_RS25310	0.51	+0.3
5,656,374	+		PFLU_RS25310	0.51	+1.6
5,656,374	+		PFLU_RS25310	0.51	-1.3
5,656,374	+		PFLU_RS25310	0.51	-1.7
5,656,374	+		PFLU_RS25310	0.51	+0.5
5,656,375	-		PFLU_RS25310	0.51	+0.8
5,656,375	-		PFLU_RS25310	0.51	-0.6
5,656,375	-		PFLU_RS25310	0.51	+0.2
5,656,375	-		PFLU_RS25310	0.51	+0.8
5,656,408	+		PFLU_RS25310	0.57	-1.0
5,656,408	+		PFLU_RS25310	0.57	+1.6
5,656,408	+		PFLU_RS25310	0.57	-1.3
5,656,408	+		PFLU_RS25310	0.57	-2.3
5,656,408	+		PFLU_RS25310	0.57	+2.3
5,656,409	-		PFLU_RS25310	0.57	+1.8
5,656,409	-		PFLU_RS25310	0.57	-1.4
5,656,409	-		PFLU_RS25310	0.57	-1.4
5,656,409	-		PFLU_RS25310	0.57	+1.4
5,656,409	-		PFLU_RS25310	0.57	-0.2
5,656,504	-		PFLU_RS25310	0.74	-1.7
5,656,504	-		PFLU_RS25310	0.74	+0.2
5,656,646	+				-1.6
5,656,646	+				-1.0
5,656,646	+				-1.9
5,656,646	+				-0.1
5,656,646	+				+0.5
5,656,646	+				+0.5
5,656,646	+				-1.1
5,656,646	+				-2.3
5,656,646	+				-0.6
5,656,646	+				+0.8
5,656,646	+				-1.7
5,656,646	+				-0.8
5,656,646	+				+0.2
5,656,647	-				+1.3
5,656,647	-				-0.1
5,656,647	-				-0.1
5,656,647	-				-2.1
5,656,647	-				+2.2
5,656,647	-				-0.4
5,656,647	-				+0.2
5,656,647	-				+1.0
5,656,647	-				+1.6
5,656,647	-				-1.5
5,656,647	-				-0.9
5,656,647	-				-0.4
5,656,647	-				+0.5
5,656,713	+		PFLU_RS25315	0.16	-1.9
5,656,777	+		PFLU_RS25315	0.33	-1.9
5,656,777	+		PFLU_RS25315	0.33	-1.4
5,656,777	+		PFLU_RS25315	0.33	-2.5
5,656,777	+		PFLU_RS25315	0.33	+1.3
5,656,777	+		PFLU_RS25315	0.33	-2.1
5,656,778	-		PFLU_RS25315	0.34	-0.1
5,656,778	-		PFLU_RS25315	0.34	-3.1
5,656,778	-		PFLU_RS25315	0.34	-1.0
5,656,778	-		PFLU_RS25315	0.34	-1.3
5,656,778	-		PFLU_RS25315	0.34	+0.0
5,656,778	-		PFLU_RS25315	0.34	-0.8
5,656,828	+		PFLU_RS25315	0.47	-1.4
5,656,828	+		PFLU_RS25315	0.47	+0.9
5,656,828	+		PFLU_RS25315	0.47	-2.8
5,656,842	+		PFLU_RS25315	0.51	-1.8
5,656,842	+		PFLU_RS25315	0.51	+0.6
5,656,842	+		PFLU_RS25315	0.51	+0.5
5,656,843	-		PFLU_RS25315	0.51	+3.2
5,656,942	+		PFLU_RS25315	0.77	-0.4
5,656,942	+		PFLU_RS25315	0.77	-2.8
5,656,942	+		PFLU_RS25315	0.77	+0.9
5,657,044	+				-1.8
5,657,045	-				-1.3