Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS19180

Experiment: Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x
3,990,978	+		BWI76_RS19175	0.42	+1.4
3,990,986	-		BWI76_RS19175	0.42	+0.8
3,991,052	+		BWI76_RS19175	0.48	+1.0
3,991,254	-		BWI76_RS19175	0.63	-0.7
3,991,401	+		BWI76_RS19175	0.75	+1.1
3,991,409	-		BWI76_RS19175	0.76	+1.5
3,991,420	-		BWI76_RS19175	0.76	+0.2
3,991,542	-		BWI76_RS19175	0.86	-1.9
3,991,542	-		BWI76_RS19175	0.86	-0.3
3,991,642	-				+0.3
3,991,642	-				+0.8
3,991,664	+				+0.5
3,991,668	-				-1.8
3,991,674	-				-1.6
3,991,685	+				-3.8
3,992,030	+				-0.6
3,992,045	+				-0.4
3,992,069	+				-0.2
3,992,099	+				+1.1
3,992,099	+				+1.4
3,992,107	-		BWI76_RS19180	0.10	-1.4
3,992,107	-		BWI76_RS19180	0.10	-1.4
3,992,164	-		BWI76_RS19180	0.14	+1.2
3,992,263	-		BWI76_RS19180	0.20	+2.3
3,992,263	-		BWI76_RS19180	0.20	+0.8
3,992,348	+		BWI76_RS19180	0.26	+0.7
3,992,414	+		BWI76_RS19180	0.30	+0.9
3,992,459	+		BWI76_RS19180	0.33	+1.0
3,992,599	+		BWI76_RS19180	0.43	+1.4
3,992,624	-		BWI76_RS19180	0.44	+0.4
3,992,758	-		BWI76_RS19180	0.53	+0.8
3,993,039	+		BWI76_RS19180	0.72	-1.1
3,993,240	-		BWI76_RS19180	0.85	+0.9
3,993,296	-		BWI76_RS19180	0.89	+0.3
3,993,597	+		BWI76_RS19185	0.14	+1.0
3,993,731	-		BWI76_RS19185	0.27	+1.0
3,993,743	+		BWI76_RS19185	0.28	-0.2
3,993,890	+		BWI76_RS19185	0.43	+1.2
3,993,915	-		BWI76_RS19185	0.45	-0.2
3,994,031	+		BWI76_RS19185	0.56	+0.1
3,994,236	+		BWI76_RS19185	0.76	-1.6
3,994,294	+		BWI76_RS19185	0.82	+0.9
3,994,373	+		BWI76_RS19185	0.89	-1.4
3,994,438	+				-0.3