Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS18445

Experiment: Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x
3,825,911	+				+0.7
3,825,919	-				+0.4
3,825,926	+				+0.4
3,825,940	+				+0.7
3,825,957	-				-0.8
3,825,962	-				-2.8
3,825,965	-				-1.0
3,825,984	+				-0.5
3,825,985	+				+0.5
3,826,022	+				-0.6
3,826,022	+				-1.2
3,826,022	+				-3.3
3,826,022	+				+1.9
3,826,022	+				-2.7
3,826,030	-				-0.4
3,826,030	-				+0.1
3,826,030	-				+0.5
3,826,030	-				+0.8
3,826,031	-				-2.5
3,826,044	+				-3.1
3,826,044	-				-4.3
3,826,044	-				-0.6
3,826,044	-				+0.4
3,826,044	-				+0.0
3,826,047	+				-0.5
3,826,047	-				-0.2
3,826,050	+				+0.0
3,826,058	-				-1.0
3,826,073	-				+0.4
3,826,073	-				-0.9
3,826,073	-				+0.0
3,826,073	-				+0.6
3,826,079	-				-0.3
3,826,114	-				-0.2
3,826,157	-				-1.8
3,826,177	+				+0.7
3,826,177	+				-4.4
3,826,177	+				+0.6
3,826,177	+				-1.5
3,826,177	+				-0.4
3,826,177	+				+0.0
3,826,185	-				+0.7
3,826,185	-				-0.4
3,826,185	-				-1.3
3,826,185	-				-0.0
3,826,185	-				+0.9
3,826,185	-				-0.7
3,826,185	-				-1.5
3,826,185	-				-0.5
3,826,185	-				-0.3
3,826,185	-				+0.8
3,826,185	-				+0.0
3,826,185	-				+0.0
3,826,185	-				+0.0
3,826,185	-				+0.7
3,826,185	-				-0.7
3,826,185	-				-3.8
3,826,185	-				+0.1
3,826,191	+				+0.3
3,826,199	-				-2.4
3,826,199	-				-2.4
3,826,202	+				+1.2
3,826,204	+				+1.0
3,826,205	-				+0.6
3,826,210	-				-3.2
3,826,210	-				-0.6
3,826,210	-				+1.1
3,826,210	-				+0.3
3,826,210	-				-1.2
3,826,226	-				+0.2
3,826,249	-				-0.4
3,826,255	+				+1.0
3,826,263	-				-0.5
3,826,289	+				-1.0
3,826,297	-				-1.3
3,826,297	-				-2.4
3,826,297	-				+1.5
3,826,297	-				+0.5
3,826,304	-				-1.3
3,826,346	-				-3.5
3,826,346	-				-2.7
3,826,346	-				-0.3
3,826,346	-				-0.5
3,826,346	-				-1.3
3,826,346	-				+1.7
3,826,346	-				-2.5
3,826,348	+				-1.0
3,826,348	+				+1.0
3,826,348	+				-1.2
3,826,348	+				+0.1
3,826,356	-				+2.0
3,826,356	-				-2.3
3,826,356	-				+0.9
3,826,356	-				+0.2
3,826,356	-				+0.8
3,826,356	-				-3.8
3,826,356	-				+0.4
3,826,356	-				-1.9
3,826,356	-				+0.4
3,826,356	-				-0.5
3,826,356	-				-3.0
3,826,356	-				+0.1
3,826,356	-				-0.5
3,826,356	-				-0.4
3,826,461	+				-0.3
3,826,468	-				-2.1
3,826,517	-		BWI76_RS18440	0.16	-0.2
3,826,519	+		BWI76_RS18440	0.17	-2.3
3,826,572	-		BWI76_RS18440	0.30	-1.8
3,826,574	+		BWI76_RS18440	0.31	-0.2
3,826,576	+		BWI76_RS18440	0.31	-2.4
3,826,576	+		BWI76_RS18440	0.31	+1.0
3,826,576	+		BWI76_RS18440	0.31	-0.4
3,826,582	-		BWI76_RS18440	0.33	+2.1
3,826,584	-		BWI76_RS18440	0.33	-1.0
3,826,584	-		BWI76_RS18440	0.33	+0.0
3,826,584	-		BWI76_RS18440	0.33	-1.5
3,826,598	+		BWI76_RS18440	0.37	+0.0
3,826,598	+		BWI76_RS18440	0.37	+2.6
3,826,598	+		BWI76_RS18440	0.37	+0.5
3,826,753	+		BWI76_RS18440	0.77	+4.0
3,826,761	-		BWI76_RS18440	0.79	+0.4
3,826,762	+		BWI76_RS18440	0.79	-1.0
3,826,770	-		BWI76_RS18440	0.81	-1.3
3,826,924	+				-3.4
3,826,928	-				-4.2
3,826,934	+				-0.5
3,826,942	-		BWI76_RS18445	0.10	-1.0
3,826,944	+		BWI76_RS18445	0.10	-1.1
3,827,122	-		BWI76_RS18445	0.28	-1.8
3,827,122	-		BWI76_RS18445	0.28	-1.0
3,827,122	-		BWI76_RS18445	0.28	-4.3
3,827,122	-		BWI76_RS18445	0.28	-0.7
3,827,122	-		BWI76_RS18445	0.28	-0.2
3,827,122	-		BWI76_RS18445	0.28	-3.8
3,827,122	-				+0.0
3,827,122	-		BWI76_RS18445	0.28	-2.5
3,827,176	+		BWI76_RS18445	0.34	-1.8
3,827,178	+		BWI76_RS18445	0.34	+1.0
3,827,178	+		BWI76_RS18445	0.34	-1.5
3,827,178	+		BWI76_RS18445	0.34	+0.9
3,827,188	+		BWI76_RS18445	0.35	+1.0
3,827,325	+		BWI76_RS18445	0.49	+1.2
3,827,341	+		BWI76_RS18445	0.50	-0.5
3,827,365	-		BWI76_RS18445	0.53	+0.5
3,827,566	-		BWI76_RS18445	0.73	-2.4
3,827,592	+				-1.3
3,827,593	-		BWI76_RS18445	0.76	-0.5
3,827,677	+		BWI76_RS18445	0.84	-3.1
3,827,683	-		BWI76_RS18445	0.85	-1.8
3,827,685	-		BWI76_RS18445	0.85	+0.5
3,827,857	-				-1.1
3,827,882	+				+0.0
3,828,057	-		BWI76_RS18450	0.16	-2.5
3,828,232	-		BWI76_RS18450	0.28	+0.8
3,828,240	-		BWI76_RS18450	0.28	-1.3
3,828,272	-		BWI76_RS18450	0.30	-0.5
3,828,273	-		BWI76_RS18450	0.30	-2.4
3,828,617	-		BWI76_RS18450	0.54	-1.9