Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS13855

Experiment: Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x
2,888,820	+		BWI76_RS13845	0.54	-0.6
2,888,820	+		BWI76_RS13845	0.54	-3.0
2,889,458	+		BWI76_RS13850	0.46	+0.5
2,889,509	-		BWI76_RS13850	0.57	+1.2
2,889,546	+		BWI76_RS13850	0.64	-2.2
2,889,654	-		BWI76_RS13850	0.87	-3.7
2,889,718	-				-1.4
2,889,763	-				-1.4
2,889,919	+		BWI76_RS13855	0.28	+2.2
2,889,989	+		BWI76_RS13855	0.45	+0.6
2,890,008	+		BWI76_RS13855	0.49	+0.2
2,890,215	+				+0.4
2,890,256	+				-4.2
2,890,423	+				-0.1
2,890,608	-		BWI76_RS13860	0.30	-1.6
2,890,779	+		BWI76_RS13860	0.50	+0.4
2,890,787	-		BWI76_RS13860	0.51	-3.0
2,891,019	-		BWI76_RS13860	0.78	-2.6
2,891,077	-		BWI76_RS13860	0.84	-0.7
2,891,097	+		BWI76_RS13860	0.87	+0.3
2,891,097	+		BWI76_RS13860	0.87	-4.4
2,891,097	+		BWI76_RS13860	0.87	-2.9
2,891,105	-		BWI76_RS13860	0.88	-0.0
2,891,105	-		BWI76_RS13860	0.88	+0.1
2,891,107	+		BWI76_RS13860	0.88	-1.8
2,891,131	+				+1.5
2,891,137	-				-0.6
2,891,139	-				+1.1
2,891,142	+				+1.1
2,891,154	+				+2.6
2,891,154	+				-2.7
2,891,160	-				+1.0
2,891,160	-				+0.7
2,891,162	-				-0.9
2,891,164	+				+0.5
2,891,164	+				-3.0
2,891,167	+				-2.4
2,891,167	+				-0.6
2,891,174	+				+0.2
2,891,174	+				-0.0
2,891,174	+				-5.0
2,891,174	+				-3.5
2,891,174	+				-0.6
2,891,175	-				-1.0
2,891,179	+				-1.6
2,891,180	-				-2.2
2,891,182	-				+0.5
2,891,184	+				-0.3
2,891,186	+				+2.5
2,891,187	-				-1.0
2,891,195	-				+1.0
2,891,195	-				+1.9