Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS12535

Experiment: Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x
2,618,118	+		BWI76_RS12530	0.61	+1.3
2,618,126	-		BWI76_RS12530	0.61	+0.0
2,618,126	-		BWI76_RS12530	0.61	-2.7
2,618,169	+		BWI76_RS12530	0.64	+2.8
2,618,169	+		BWI76_RS12530	0.64	-0.5
2,618,169	+		BWI76_RS12530	0.64	+0.2
2,618,169	+		BWI76_RS12530	0.64	+0.3
2,618,185	-		BWI76_RS12530	0.65	-2.4
2,618,192	+		BWI76_RS12530	0.66	-2.0
2,618,197	+		BWI76_RS12530	0.66	+2.4
2,618,200	-		BWI76_RS12530	0.66	+0.0
2,618,248	+		BWI76_RS12530	0.70	-0.4
2,618,349	+		BWI76_RS12530	0.77	-2.9
2,618,357	-		BWI76_RS12530	0.77	+3.3
2,618,397	+		BWI76_RS12530	0.80	+0.6
2,618,405	-		BWI76_RS12530	0.80	-1.6
2,618,405	-		BWI76_RS12530	0.80	+2.0
2,618,413	-		BWI76_RS12530	0.81	+0.4
2,618,454	+		BWI76_RS12530	0.84	-1.4
2,618,531	-		BWI76_RS12530	0.89	-2.0
2,618,541	-		BWI76_RS12530	0.90	-0.3
2,618,687	+				-1.8
2,618,695	-				+2.4
2,618,706	+				-0.4
2,618,709	-				+0.2
2,618,709	-				+0.2
2,618,711	-				-2.7
2,618,714	-				-0.8
2,618,714	-				-2.6
2,618,714	-				-3.0
2,618,826	-				+0.2
2,618,869	-				-1.8
2,618,869	-				-1.8
2,618,869	-				-1.6
2,618,998	+				+1.2
2,618,998	+				-1.4
2,618,998	+				+0.2
2,619,006	-				+0.7
2,619,056	+				+2.4
2,619,064	-				+0.2
2,619,118	+				+0.6
2,619,118	+				-3.3
2,619,118	+				-1.1
2,619,118	+				+1.2
2,619,118	+				-2.4
2,619,118	+				+3.6
2,619,118	+				-0.0
2,619,118	+				-1.4
2,619,118	+				-2.3
2,619,118	+				-0.3
2,619,118	+				+0.6
2,619,118	+				-0.4
2,619,120	+				-2.7
2,619,120	+				-1.4
2,619,123	+		BWI76_RS12535	0.11	+0.2
2,619,123	+		BWI76_RS12535	0.11	-1.8
2,619,123	+		BWI76_RS12535	0.11	+3.2
2,619,126	-		BWI76_RS12535	0.12	+1.1
2,619,128	+		BWI76_RS12535	0.13	+0.4
2,619,168	+		BWI76_RS12535	0.33	+1.2
2,619,168	+		BWI76_RS12535	0.33	-1.1
2,619,181	+		BWI76_RS12535	0.39	-1.5
2,619,235	+		BWI76_RS12535	0.66	+1.2
2,619,235	+		BWI76_RS12535	0.66	-1.4
2,619,265	+		BWI76_RS12535	0.80	-2.1
2,619,267	-		BWI76_RS12535	0.81	+0.2
2,619,267	-		BWI76_RS12535	0.81	-2.4
2,619,279	+		BWI76_RS12535	0.87	-0.8
2,619,279	+		BWI76_RS12535	0.87	-2.4
2,619,279	+		BWI76_RS12535	0.87	-2.4
2,619,282	-				+1.2
2,619,436	-				+2.0
2,619,450	-				-1.4
2,619,497	+				-1.6
2,619,622	+				-1.7
2,619,623	+				+1.4
2,619,631	+				-3.4
2,619,633	+				-2.6
2,619,633	+				+1.0
2,619,633	+				-2.7
2,619,633	+				-2.0
2,619,633	+				-2.0
2,619,633	+				-2.1
2,619,633	+				+0.6
2,619,633	+				-0.4
2,619,633	+				+3.3
2,619,633	+				-0.1
2,619,634	+				-2.5
2,619,641	-				-0.8
2,619,641	-				+1.2
2,619,641	-				-2.6
2,619,641	-				-1.1
2,619,654	-				+1.2
2,619,679	-				-0.5
2,619,679	-				-0.4