Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS09985

Experiment: Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x
2,100,281	+				-1.5
2,100,302	-				-2.1
2,100,370	+				-0.5
2,100,370	+				+0.9
2,100,370	-				+1.0
2,100,375	-				+1.0
2,100,378	-				-1.8
2,100,378	-				-0.5
2,100,378	-				-0.1
2,100,378	-				+2.1
2,100,378	-				+0.0
2,100,378	-				-1.0
2,100,378	-				-3.3
2,100,385	+				-0.3
2,100,388	-				-3.3
2,100,388	-				+1.3
2,100,390	+				-1.8
2,100,398	+				-0.4
2,100,398	-				+0.1
2,100,398	-				-0.3
2,100,398	-				+1.3
2,100,398	-				+2.0
2,100,399	-				+1.0
2,100,412	-				-3.0
2,100,446	+				-2.3
2,100,446	+				+0.0
2,100,510	-				-1.5
2,100,523	+				+0.3
2,100,640	+				+0.5
2,100,640	+				-1.0
2,100,640	+				+1.7
2,100,645	+				+0.2
2,100,648	-				-1.8
2,100,650	+				-2.9
2,100,650	+				-0.3
2,100,650	+				+2.3
2,100,650	+				+2.0
2,100,650	+				-1.7
2,100,658	-				-0.5
2,100,658	-				+1.0
2,100,668	-				-1.3
2,100,669	-				+1.0
2,100,669	-				-1.5
2,100,669	-				+1.0
2,100,705	+		BWI76_RS09980	0.14	-3.7
2,100,706	+		BWI76_RS09980	0.14	-2.5
2,100,706	+		BWI76_RS09980	0.14	-0.7
2,100,706	+				-0.5
2,100,711	+		BWI76_RS09980	0.15	-1.3
2,100,714	-		BWI76_RS09980	0.15	-0.5
2,100,714	-		BWI76_RS09980	0.15	+1.0
2,100,714	-		BWI76_RS09980	0.15	-2.7
2,100,714	-		BWI76_RS09980	0.15	+0.0
2,100,714	-		BWI76_RS09980	0.15	-1.8
2,100,720	+		BWI76_RS09980	0.16	-3.5
2,100,730	-		BWI76_RS09980	0.18	-0.2
2,100,772	+		BWI76_RS09980	0.25	-0.0
2,100,784	+		BWI76_RS09980	0.27	-1.8
2,100,791	+		BWI76_RS09980	0.28	+1.0
2,100,791	+		BWI76_RS09980	0.28	+1.0
2,100,791	+		BWI76_RS09980	0.28	+1.3
2,100,791	+		BWI76_RS09980	0.28	+1.4
2,100,794	-		BWI76_RS09980	0.28	-1.8
2,100,794	-		BWI76_RS09980	0.28	-1.3
2,100,799	-		BWI76_RS09980	0.29	+0.0
2,100,799	-		BWI76_RS09980	0.29	-0.7
2,100,799	-		BWI76_RS09980	0.29	-1.4
2,100,838	+		BWI76_RS09980	0.35	-2.9
2,100,900	-		BWI76_RS09980	0.45	+3.5
2,100,921	+		BWI76_RS09980	0.49	-0.6
2,100,927	-		BWI76_RS09980	0.50	-1.0
2,101,005	+		BWI76_RS09980	0.62	-0.5
2,101,005	+		BWI76_RS09980	0.62	-1.1
2,101,005	+		BWI76_RS09980	0.62	-2.0
2,101,005	+		BWI76_RS09980	0.62	-0.3
2,101,005	+		BWI76_RS09980	0.62	+0.4
2,101,005	+		BWI76_RS09980	0.62	+1.5
2,101,005	+		BWI76_RS09980	0.62	-1.5
2,101,005	+		BWI76_RS09980	0.62	+1.5
2,101,013	-		BWI76_RS09980	0.63	+0.6
2,101,013	-		BWI76_RS09980	0.63	-1.8
2,101,038	+		BWI76_RS09980	0.67	+0.3
2,101,039	+		BWI76_RS09980	0.67	-3.4
2,101,039	+		BWI76_RS09980	0.67	+0.0
2,101,039	+		BWI76_RS09980	0.67	-1.3
2,101,039	+		BWI76_RS09980	0.67	-0.6
2,101,039	+		BWI76_RS09980	0.67	-0.8
2,101,047	-				+1.5
2,101,049	+		BWI76_RS09980	0.69	-2.3
2,101,049	+		BWI76_RS09980	0.69	-1.5
2,101,049	+		BWI76_RS09980	0.69	-1.9
2,101,049	+		BWI76_RS09980	0.69	+0.8
2,101,049	+		BWI76_RS09980	0.69	+1.6
2,101,049	+		BWI76_RS09980	0.69	+1.3
2,101,049	+		BWI76_RS09980	0.69	-1.0
2,101,057	-		BWI76_RS09980	0.70	-2.0
2,101,057	-		BWI76_RS09980	0.70	-0.5
2,101,057	-		BWI76_RS09980	0.70	+1.2
2,101,065	+		BWI76_RS09980	0.72	+1.5
2,101,065	+		BWI76_RS09980	0.72	+1.0
2,101,065	+		BWI76_RS09980	0.72	-1.0
2,101,075	+		BWI76_RS09980	0.73	-2.4
2,101,075	+		BWI76_RS09980	0.73	-4.7
2,101,126	+		BWI76_RS09980	0.81	-0.6
2,101,130	+		BWI76_RS09980	0.82	-2.9
2,101,137	+		BWI76_RS09980	0.83	+0.0
2,101,147	+		BWI76_RS09980	0.85	+0.4
2,101,155	-		BWI76_RS09980	0.86	-2.4
2,101,155	-		BWI76_RS09980	0.86	+0.6
2,101,163	+		BWI76_RS09980	0.87	+1.5
2,101,170	+		BWI76_RS09980	0.88	-2.5
2,101,186	+				-0.1
2,101,187	+				-0.0
2,101,188	+				+0.6
2,101,194	-				-0.4
2,101,196	-				-3.7
2,101,211	-				+1.6
2,101,292	-				-1.0
2,101,320	+				+2.4
2,101,404	+				+0.2
2,101,625	+		BWI76_RS09985	0.19	+1.8
2,101,625	+				-1.8
2,101,657	-		BWI76_RS09985	0.20	+0.8
2,101,804	-		BWI76_RS09985	0.27	-2.0
2,101,851	+		BWI76_RS09985	0.29	-3.0
2,101,913	+		BWI76_RS09985	0.32	+0.0
2,102,174	+		BWI76_RS09985	0.44	+0.7
2,102,182	-		BWI76_RS09985	0.45	-3.9
2,102,197	-		BWI76_RS09985	0.45	-0.3
2,102,276	-		BWI76_RS09985	0.49	+0.2
2,102,314	-		BWI76_RS09985	0.51	-3.1
2,102,314	-		BWI76_RS09985	0.51	+0.0
2,102,435	-		BWI76_RS09985	0.56	-1.5
2,102,470	+		BWI76_RS09985	0.58	-0.4
2,102,531	-		BWI76_RS09985	0.61	+0.1
2,102,648	-		BWI76_RS09985	0.66	-3.0
2,102,727	-		BWI76_RS09985	0.70	-2.3
2,102,770	-		BWI76_RS09985	0.72	-1.1
2,102,780	-		BWI76_RS09985	0.73	+0.0
2,102,856	+		BWI76_RS09985	0.76	-1.4
2,103,116	-		BWI76_RS09985	0.88	+1.1
2,103,247	+				+1.5
2,103,452	-		BWI76_RS09990	0.16	+1.1
2,103,530	-		BWI76_RS09990	0.33	+0.0
2,103,679	-		BWI76_RS09990	0.66	-1.6
2,103,684	-		BWI76_RS09990	0.68	+1.2
2,103,684	-		BWI76_RS09990	0.68	+0.1
2,103,686	-		BWI76_RS09990	0.68	-0.1
2,103,710	-		BWI76_RS09990	0.73	-0.1
2,103,723	-		BWI76_RS09990	0.76	+0.1
2,103,724	-		BWI76_RS09990	0.77	-1.0
2,103,738	+		BWI76_RS09990	0.80	-1.3
2,103,803	-				-1.8
2,103,834	-				-1.3
2,103,838	+				-0.6
2,103,846	-				-2.7
2,103,859	+				-0.6
2,103,867	-				+1.2
2,104,006	+				+0.7
2,104,162	+		BWI76_RS09995	0.10	+0.5
2,104,205	-		BWI76_RS09995	0.12	-0.3