Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS09085

Experiment: Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x
1,917,117	+				+1.0
1,917,343	-		BWI76_RS09080	0.33	-0.1
1,917,670	+		BWI76_RS09080	0.76	+0.8
1,917,818	-				+1.4
1,917,838	+				+1.3
1,917,865	-				+0.7
1,918,082	-		BWI76_RS09085	0.19	+1.0
1,918,231	+		BWI76_RS09085	0.31	-1.1
1,918,347	-		BWI76_RS09085	0.40	+1.4
1,918,418	+		BWI76_RS09085	0.46	+0.9
1,918,435	+		BWI76_RS09085	0.47	+2.0
1,918,585	-		BWI76_RS09085	0.59	+0.5
1,918,846	+		BWI76_RS09085	0.81	+1.7
1,919,054	-				+0.3
1,919,139	-				-0.8
1,919,319	+				-3.1
1,919,343	+				-2.4
1,919,348	-				+0.4
1,919,353	-				-0.2
1,919,403	-		BWI76_RS09090	0.15	+0.9
1,919,416	-		BWI76_RS09090	0.16	+1.0
1,919,476	-		BWI76_RS09090	0.23	+0.2
1,919,975	-		BWI76_RS09090	0.76	-0.9
1,920,075	+		BWI76_RS09090	0.86	-0.1