Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS08485

Experiment: Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x
1,796,394	-		BWI76_RS08480	0.56	+2.7
1,796,789	-		BWI76_RS08480	0.84	-3.2
1,796,789	-		BWI76_RS08480	0.84	+2.6
1,796,847	-		BWI76_RS08480	0.88	-2.0
1,796,859	+		BWI76_RS08480	0.88	-0.4
1,796,867	-		BWI76_RS08480	0.89	-1.7
1,796,867	-		BWI76_RS08480	0.89	-0.2
1,796,867	-		BWI76_RS08480	0.89	+0.4
1,796,975	-				-0.5
1,797,024	+				-1.5
1,797,057	+				-0.4
1,797,080	+				-0.0
1,797,085	+				+0.5
1,797,085	+				-1.0
1,797,207	+		BWI76_RS08485	0.12	-3.5
1,797,315	+		BWI76_RS08485	0.20	-1.2
1,797,912	+		BWI76_RS08485	0.63	-0.8
1,798,009	-		BWI76_RS08485	0.70	-0.2
1,798,011	+		BWI76_RS08485	0.70	+0.4
1,798,110	-		BWI76_RS08485	0.77	-0.2
1,798,283	+		BWI76_RS08485	0.89	+0.6
1,798,345	-				-3.9
1,798,363	+				+0.3
1,798,363	+				-1.4
1,798,371	-				+0.8
1,798,435	-				-0.8
1,798,451	+				-4.1
1,798,456	+				-0.0
1,798,612	+		BWI76_RS08490	0.40	+0.8
1,798,619	-		BWI76_RS08490	0.42	+0.6
1,798,629	-		BWI76_RS08490	0.44	-0.8
1,798,660	+		BWI76_RS08490	0.51	-1.0
1,798,660	+		BWI76_RS08490	0.51	-0.0
1,798,660	+		BWI76_RS08490	0.51	+1.0
1,798,660	+		BWI76_RS08490	0.51	-2.4
1,798,660	+		BWI76_RS08490	0.51	+0.0
1,798,660	+		BWI76_RS08490	0.51	+0.9
1,798,660	+		BWI76_RS08490	0.51	+0.2
1,798,660	+		BWI76_RS08490	0.51	-3.2
1,798,660	+		BWI76_RS08490	0.51	+1.7
1,798,668	-		BWI76_RS08490	0.53	+0.1
1,798,668	-		BWI76_RS08490	0.53	+0.7
1,798,668	-		BWI76_RS08490	0.53	-1.8
1,798,668	-		BWI76_RS08490	0.53	-0.0
1,798,668	-		BWI76_RS08490	0.53	+0.8
1,798,668	-		BWI76_RS08490	0.53	-1.2
1,798,668	-		BWI76_RS08490	0.53	+1.0
1,798,693	-		BWI76_RS08490	0.58	+1.1
1,798,705	-		BWI76_RS08490	0.61	-0.1
1,798,710	-		BWI76_RS08490	0.62	-2.8
1,798,747	-		BWI76_RS08490	0.70	-2.3
1,798,771	+		BWI76_RS08490	0.76	-0.2
1,798,773	-		BWI76_RS08490	0.76	-4.2
1,798,795	-		BWI76_RS08490	0.81	+0.6
1,798,816	-		BWI76_RS08490	0.86	+0.6
1,798,820	+		BWI76_RS08490	0.87	-0.6
1,798,821	-		BWI76_RS08490	0.87	+0.3
1,798,828	+		BWI76_RS08490	0.88	-0.8
1,798,830	+		BWI76_RS08490	0.89	-2.7
1,798,836	-				-1.7
1,798,836	-				-1.6
1,798,838	-				+1.6
1,798,838	-				-0.5
1,798,845	-				-2.3
1,798,888	-				-0.5
1,798,888	-				-0.7
1,798,890	+				-0.8
1,798,895	-				+1.0
1,798,898	-				+1.0
1,798,898	-				+0.9
1,798,937	+				-1.1
1,798,953	+				-1.2
1,798,961	-				-0.7
1,798,963	+				-1.6
1,798,963	+				-1.3
1,798,971	-				+1.2
1,798,971	-				-1.0
1,799,341	+				-0.3
1,799,341	+				-2.2
1,799,341	+				-2.5
1,799,341	+				-1.3
1,799,341	+				-0.1
1,799,341	+				-2.0
1,799,356	+				-0.0
1,799,363	-				-2.5
1,799,364	-				+0.1
1,799,364	-				-0.2
1,799,378	-				-1.0
1,799,385	+				-0.0
1,799,385	+				+0.0
1,799,391	-				-2.3
1,799,395	-				+0.2
1,799,402	+				+1.2
1,799,403	-				-2.8