Experiment: fumarate electron acceptor; flight
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt galK and SO0695 are separated by 314 nucleotides SO0695 and dsbD are separated by 152 nucleotides
SO0694: galK - galactokinase (NCBI ptt file), at 710,918 to 712,063
galK
SO0695: SO0695 - glutathione-regulated potassium-efflux system protein KefC, putative (NCBI ptt file), at 712,378 to 714,021
SO0695
SO0696: dsbD - thiol:disulfide interchange protein DsbD (NCBI ptt file), at 714,174 to 716,006
dsbD
Position (kb) 712
713
714
715 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 711.391 kb on + strand, within galK at 711.395 kb on + strand, within galK at 711.403 kb on - strand, within galK at 711.488 kb on - strand, within galK at 711.491 kb on + strand, within galK at 711.500 kb on - strand, within galK at 711.603 kb on - strand, within galK at 711.702 kb on + strand, within galK at 711.739 kb on + strand, within galK at 711.744 kb on + strand, within galK at 711.752 kb on - strand, within galK at 711.872 kb on - strand, within galK at 711.872 kb on - strand, within galK at 711.944 kb on + strand, within galK at 711.980 kb on + strand at 711.988 kb on - strand at 712.053 kb on + strand at 712.130 kb on - strand at 712.183 kb on + strand at 712.193 kb on + strand at 712.193 kb on + strand at 712.193 kb on + strand at 712.193 kb on + strand at 712.193 kb on + strand at 712.193 kb on + strand at 712.193 kb on + strand at 712.193 kb on + strand at 712.193 kb on + strand at 712.193 kb on + strand at 712.193 kb on + strand at 712.193 kb on + strand at 712.193 kb on + strand at 712.193 kb on + strand at 712.193 kb on + strand at 712.193 kb on + strand at 712.193 kb on + strand at 712.193 kb on + strand at 712.193 kb on + strand at 712.193 kb on + strand at 712.193 kb on + strand at 712.193 kb on + strand at 712.193 kb on + strand at 712.193 kb on + strand at 712.193 kb on + strand at 712.193 kb on + strand at 712.193 kb on + strand at 712.193 kb on + strand at 712.193 kb on + strand at 712.193 kb on + strand at 712.193 kb on + strand at 712.193 kb on + strand at 712.193 kb on + strand at 712.193 kb on + strand at 712.193 kb on + strand at 712.193 kb on + strand at 712.193 kb on + strand at 712.193 kb on + strand at 712.201 kb on - strand at 712.201 kb on - strand at 712.201 kb on - strand at 712.201 kb on - strand at 712.201 kb on - strand at 712.201 kb on - strand at 712.201 kb on - strand at 712.201 kb on - strand at 712.201 kb on - strand at 712.201 kb on - strand at 712.201 kb on - strand at 712.201 kb on - strand at 712.201 kb on - strand at 712.201 kb on - strand at 712.201 kb on - strand at 712.201 kb on - strand at 712.201 kb on - strand at 712.201 kb on - strand at 712.201 kb on - strand at 712.202 kb on + strand at 712.258 kb on - strand at 712.328 kb on - strand at 712.361 kb on + strand at 712.419 kb on + strand at 712.719 kb on - strand, within SO0695 at 712.730 kb on - strand, within SO0695 at 712.731 kb on + strand, within SO0695 at 712.789 kb on + strand, within SO0695 at 712.834 kb on + strand, within SO0695 at 712.891 kb on - strand, within SO0695 at 712.990 kb on + strand, within SO0695 at 712.990 kb on + strand, within SO0695 at 712.998 kb on - strand, within SO0695 at 712.998 kb on - strand, within SO0695 at 712.998 kb on - strand, within SO0695 at 713.091 kb on + strand, within SO0695 at 713.091 kb on + strand, within SO0695 at 713.091 kb on + strand, within SO0695 at 713.106 kb on + strand, within SO0695 at 713.106 kb on + strand, within SO0695 at 713.114 kb on - strand, within SO0695 at 713.114 kb on - strand, within SO0695 at 713.114 kb on - strand, within SO0695 at 713.114 kb on - strand, within SO0695 at 713.114 kb on - strand, within SO0695 at 713.114 kb on - strand, within SO0695 at 713.344 kb on + strand, within SO0695 at 713.379 kb on + strand, within SO0695 at 713.418 kb on - strand, within SO0695 at 713.436 kb on + strand, within SO0695 at 713.436 kb on + strand, within SO0695 at 713.444 kb on - strand, within SO0695 at 713.446 kb on + strand, within SO0695 at 713.446 kb on + strand, within SO0695 at 713.446 kb on + strand, within SO0695 at 713.454 kb on - strand, within SO0695 at 713.454 kb on - strand, within SO0695 at 713.454 kb on - strand, within SO0695 at 713.514 kb on - strand, within SO0695 at 713.619 kb on + strand, within SO0695 at 713.656 kb on + strand, within SO0695 at 713.670 kb on + strand, within SO0695 at 713.670 kb on + strand, within SO0695 at 713.670 kb on + strand, within SO0695 at 713.678 kb on - strand, within SO0695 at 713.699 kb on - strand, within SO0695 at 713.717 kb on - strand, within SO0695 at 713.801 kb on + strand, within SO0695 at 713.801 kb on + strand, within SO0695 at 713.809 kb on - strand, within SO0695 at 713.847 kb on + strand, within SO0695 at 713.855 kb on - strand, within SO0695 at 713.860 kb on - strand at 713.867 kb on - strand at 713.922 kb on + strand at 713.922 kb on + strand at 713.922 kb on + strand at 713.922 kb on + strand at 713.922 kb on + strand at 713.944 kb on + strand at 713.961 kb on + strand at 713.961 kb on + strand at 713.961 kb on + strand at 713.961 kb on + strand at 714.018 kb on + strand at 714.219 kb on + strand at 714.233 kb on + strand at 714.328 kb on + strand at 714.336 kb on - strand at 714.395 kb on + strand, within dsbD at 714.395 kb on + strand, within dsbD at 714.450 kb on - strand, within dsbD at 714.532 kb on - strand, within dsbD at 714.641 kb on - strand, within dsbD at 714.647 kb on - strand, within dsbD at 714.724 kb on - strand, within dsbD at 714.807 kb on + strand, within dsbD at 714.918 kb on - strand, within dsbD
Per-strain Table
Position Strand Gene LocusTag Fraction fumarate electron acceptor; flight remove 711,391 + galK SO0694 0.41 +0.4 711,395 + galK SO0694 0.42 +1.0 711,403 - galK SO0694 0.42 +0.8 711,488 - galK SO0694 0.50 -0.7 711,491 + galK SO0694 0.50 +0.7 711,500 - galK SO0694 0.51 +1.1 711,603 - galK SO0694 0.60 +0.1 711,702 + galK SO0694 0.68 +1.1 711,739 + galK SO0694 0.72 +0.0 711,744 + galK SO0694 0.72 +0.7 711,752 - galK SO0694 0.73 +0.3 711,872 - galK SO0694 0.83 +0.5 711,872 - galK SO0694 0.83 +0.9 711,944 + galK SO0694 0.90 +0.1 711,980 + +0.6 711,988 - +0.5 712,053 + +0.3 712,130 - -1.0 712,183 + +0.3 712,193 + -0.1 712,193 + +0.2 712,193 + +0.3 712,193 + -0.7 712,193 + -0.4 712,193 + +0.6 712,193 + -1.0 712,193 + -0.0 712,193 + -0.2 712,193 + -0.4 712,193 + +0.3 712,193 + +0.1 712,193 + +0.3 712,193 + +0.8 712,193 + +0.4 712,193 + -0.2 712,193 + -0.4 712,193 + -1.0 712,193 + -0.3 712,193 + +0.4 712,193 + -0.6 712,193 + +0.0 712,193 + +0.1 712,193 + +0.5 712,193 + +0.3 712,193 + +0.3 712,193 + -1.0 712,193 + -0.5 712,193 + -0.9 712,193 + -0.5 712,193 + +0.1 712,193 + +0.4 712,193 + -2.6 712,193 + -0.1 712,193 + +0.1 712,193 + +1.3 712,193 + +1.5 712,193 + +0.4 712,201 - +0.2 712,201 - -0.9 712,201 - +0.0 712,201 - -0.6 712,201 - -0.5 712,201 - -0.2 712,201 - +0.3 712,201 - +0.0 712,201 - +0.2 712,201 - -0.0 712,201 - +0.4 712,201 - +0.7 712,201 - +0.2 712,201 - -2.2 712,201 - +0.3 712,201 - +1.7 712,201 - +0.5 712,201 - +0.0 712,201 - +0.0 712,202 + +0.3 712,258 - +0.4 712,328 - +0.3 712,361 + +0.5 712,419 + +0.4 712,719 - SO0695 0.21 -3.4 712,730 - SO0695 0.21 +0.2 712,731 + SO0695 0.21 +0.4 712,789 + SO0695 0.25 +0.2 712,834 + SO0695 0.28 -0.1 712,891 - SO0695 0.31 -0.1 712,990 + SO0695 0.37 -0.4 712,990 + SO0695 0.37 +0.0 712,998 - SO0695 0.38 +0.2 712,998 - SO0695 0.38 +0.2 712,998 - SO0695 0.38 -0.1 713,091 + SO0695 0.43 -0.7 713,091 + SO0695 0.43 -0.8 713,091 + SO0695 0.43 -0.2 713,106 + SO0695 0.44 -1.3 713,106 + SO0695 0.44 +1.1 713,114 - SO0695 0.45 -0.1 713,114 - SO0695 0.45 -0.1 713,114 - SO0695 0.45 -0.4 713,114 - SO0695 0.45 -1.2 713,114 - SO0695 0.45 +0.4 713,114 - SO0695 0.45 -0.8 713,344 + SO0695 0.59 -0.2 713,379 + SO0695 0.61 +0.7 713,418 - SO0695 0.63 -0.2 713,436 + SO0695 0.64 -0.5 713,436 + SO0695 0.64 +0.1 713,444 - SO0695 0.65 +0.2 713,446 + SO0695 0.65 -0.8 713,446 + SO0695 0.65 +0.6 713,446 + SO0695 0.65 +0.4 713,454 - SO0695 0.65 +0.2 713,454 - SO0695 0.65 -0.4 713,454 - SO0695 0.65 -0.2 713,514 - SO0695 0.69 +0.1 713,619 + SO0695 0.75 +0.1 713,656 + SO0695 0.78 -0.3 713,670 + SO0695 0.79 -0.5 713,670 + SO0695 0.79 -0.3 713,670 + SO0695 0.79 +0.8 713,678 - SO0695 0.79 -0.3 713,699 - SO0695 0.80 +0.4 713,717 - SO0695 0.81 -0.7 713,801 + SO0695 0.87 +0.1 713,801 + SO0695 0.87 +0.2 713,809 - SO0695 0.87 +0.5 713,847 + SO0695 0.89 +0.3 713,855 - SO0695 0.90 -0.4 713,860 - +0.2 713,867 - -0.3 713,922 + +0.5 713,922 + -1.4 713,922 + +0.8 713,922 + +1.3 713,922 + +2.3 713,944 + -0.1 713,961 + -0.0 713,961 + +0.3 713,961 + -0.5 713,961 + +0.1 714,018 + -0.6 714,219 + -1.9 714,233 + -2.2 714,328 + -4.1 714,336 - -1.7 714,395 + dsbD SO0696 0.12 -1.5 714,395 + dsbD SO0696 0.12 -2.0 714,450 - dsbD SO0696 0.15 -3.7 714,532 - dsbD SO0696 0.20 -1.7 714,641 - dsbD SO0696 0.25 -3.9 714,647 - dsbD SO0696 0.26 -2.6 714,724 - dsbD SO0696 0.30 -3.2 714,807 + dsbD SO0696 0.35 -1.9 714,918 - dsbD SO0696 0.41 -2.9
Or see this region's nucleotide sequence