Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_20210

Experiment: Carbon source Sucrose 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Sucrose 5 mM
4,518,342	+		AO356_20205	0.37	+0.6
4,518,343	-		AO356_20205	0.37	-0.1
4,518,349	-		AO356_20205	0.38	-1.0
4,518,349	-		AO356_20205	0.38	+0.5
4,518,349	-		AO356_20205	0.38	+0.8
4,518,349	-		AO356_20205	0.38	+0.1
4,518,558	+		AO356_20205	0.65	-1.0
4,518,559	-		AO356_20205	0.65	+0.4
4,518,559	-		AO356_20205	0.65	+1.5
4,518,559	-		AO356_20205	0.65	-1.0
4,518,559	-		AO356_20205	0.65	+0.3
4,518,559	-		AO356_20205	0.65	+0.3
4,518,561	+		AO356_20205	0.65	+1.3
4,518,561	+		AO356_20205	0.65	+0.1
4,518,561	+		AO356_20205	0.65	+1.5
4,518,561	+		AO356_20205	0.65	+0.5
4,518,561	+		AO356_20205	0.65	+0.2
4,518,561	+		AO356_20205	0.65	+0.7
4,518,561	+		AO356_20205	0.65	-0.2
4,518,561	+		AO356_20205	0.65	+0.1
4,518,561	+		AO356_20205	0.65	+0.3
4,518,561	+		AO356_20205	0.65	-0.5
4,518,562	-		AO356_20205	0.65	-0.0
4,518,562	-		AO356_20205	0.65	+0.6
4,518,562	-		AO356_20205	0.65	+0.6
4,518,562	-		AO356_20205	0.65	+0.1
4,518,562	-		AO356_20205	0.65	-0.8
4,518,562	-		AO356_20205	0.65	-0.4
4,518,667	-		AO356_20205	0.78	+0.1
4,518,711	+		AO356_20205	0.84	+0.0
4,518,711	+		AO356_20205	0.84	-0.9
4,518,711	+		AO356_20205	0.84	-0.6
4,518,711	+		AO356_20205	0.84	+0.7
4,518,712	-		AO356_20205	0.84	+0.8
4,518,712	-		AO356_20205	0.84	+1.7
4,518,712	-		AO356_20205	0.84	-0.3
4,518,712	-		AO356_20205	0.84	-1.6
4,518,712	-		AO356_20205	0.84	-0.9
4,518,716	-		AO356_20205	0.84	+0.4
4,518,760	-				-0.7
4,518,893	+				+1.1
4,518,899	+				-0.8
4,518,900	-				-0.8
4,518,900	-				-0.4
4,518,900	-				-0.9
4,518,900	-				+0.7
4,518,926	-				+0.5
4,518,926	-				+0.7
4,518,931	+				-1.2
4,518,975	+				-0.0
4,518,975	+				+0.9
4,518,975	+				+0.3
4,518,976	-				+0.9
4,518,985	+				+0.6
4,518,985	+				+0.4
4,518,986	-				-0.6
4,519,035	+				+0.2
4,519,114	+				-0.3
4,519,118	+				-0.0
4,519,119	-				-0.6
4,519,119	-				+1.5
4,519,176	+				-0.6
4,519,177	-				+0.5
4,519,182	+				+0.8
4,519,241	+				-1.1
4,519,374	+		AO356_20210	0.23	-1.5
4,519,374	+		AO356_20210	0.23	-0.1
4,519,375	-		AO356_20210	0.24	-0.4
4,519,375	-		AO356_20210	0.24	-0.4
4,519,375	-		AO356_20210	0.24	-1.0
4,519,375	-		AO356_20210	0.24	+0.2
4,519,404	+		AO356_20210	0.28	-0.2
4,519,404	+		AO356_20210	0.28	+1.3
4,519,404	+		AO356_20210	0.28	+0.7
4,519,404	+		AO356_20210	0.28	-1.5
4,519,404	+		AO356_20210	0.28	-0.5
4,519,404	+		AO356_20210	0.28	+0.2
4,519,405	-		AO356_20210	0.28	+0.5
4,519,405	-		AO356_20210	0.28	-0.1
4,519,425	+		AO356_20210	0.31	-0.9
4,519,426	-		AO356_20210	0.32	-0.6
4,519,497	+		AO356_20210	0.43	-1.3
4,519,498	-		AO356_20210	0.43	+0.6
4,519,690	-		AO356_20210	0.73	+1.0
4,519,690	-		AO356_20210	0.73	-0.2
4,519,690	-		AO356_20210	0.73	-0.6
4,519,699	-		AO356_20210	0.74	+0.6
4,519,740	+		AO356_20210	0.81	-1.0
4,519,740	+		AO356_20210	0.81	-0.2
4,519,740	+		AO356_20210	0.81	+1.0
4,519,897	-				+0.6
4,519,914	+				-1.2
4,519,914	+				-0.7
4,519,914	+				-1.1
4,519,914	+				-0.7
4,519,915	-				-1.0
4,519,915	-				-0.4
4,519,915	-				+0.3
4,519,915	-				+0.3
4,519,915	-				+0.2
4,519,935	-				-1.6
4,519,937	+				-0.4
4,519,937	+				+0.0
4,519,938	-				+0.9
4,519,938	-				+0.1
4,519,938	-				+0.4
4,520,085	+				+0.1
4,520,085	+				-1.8
4,520,085	+				-1.5
4,520,085	+				-1.3
4,520,086	-				+0.1
4,520,086	-				-1.1
4,520,093	+				+1.2
4,520,093	+				-0.6
4,520,094	-				-1.5
4,520,094	-				-2.0
4,520,094	-				-2.5
4,520,097	+				+0.1
4,520,097	+				-0.7
4,520,097	+				-1.7
4,520,097	+				-2.0
4,520,098	-				-0.1
4,520,098	-				-1.4
4,520,098	-				-0.5
4,520,175	+		AO356_20215	0.16	-0.2
4,520,175	+		AO356_20215	0.16	-1.7
4,520,176	-		AO356_20215	0.16	+0.4
4,520,176	-		AO356_20215	0.16	+0.6
4,520,267	-		AO356_20215	0.26	+0.6
4,520,405	+		AO356_20215	0.40	-1.8
4,520,557	-		AO356_20215	0.56	-0.3
4,520,670	+		AO356_20215	0.67	-0.8
4,520,670	+		AO356_20215	0.67	-0.7
4,520,676	+		AO356_20215	0.68	-0.3
4,520,676	+		AO356_20215	0.68	-0.8
4,520,676	+		AO356_20215	0.68	-1.3
4,520,677	-		AO356_20215	0.68	-0.3
4,520,677	-		AO356_20215	0.68	-2.4