Strain Fitness in Shewanella oneidensis MR-1 around SO3821

Experiment: fumarate electron acceptor; flight

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	fumarate electron acceptor; flight
3,970,041	+		SO3819.1	0.40	+0.6
3,970,083	-		SO3819.1	0.57	+0.1
3,970,117	+		SO3819.1	0.70	+0.5
3,970,214	-				+0.8
3,970,235	+				+0.2
3,970,284	-		SO3819.3	0.34	+0.3
3,970,308	-		SO3819.3	0.42	-2.3
3,970,367	-		SO3819.3	0.64	-0.2
3,970,367	-		SO3819.3	0.64	+0.6
3,970,394	+		SO3819.3	0.74	-1.0
3,970,502	+		SO3819.4	0.26	+1.8
3,970,565	+		SO3819.4	0.77	-0.5
3,970,842	-		SO_3820	0.65	-1.5
3,970,842	-		SO_3820	0.65	-1.7
3,970,904	+		SO_3820	0.82	-1.0
3,970,904	+		SO_3820	0.82	-0.1
3,970,904	+		SO_3820	0.82	-0.7
3,970,912	-		SO_3820	0.84	+0.7
3,970,967	+				-1.7
3,970,967	-				-0.7
3,970,975	-				+0.3
3,970,982	-				-0.2
3,970,986	+				-0.8
3,971,113	+				+1.3
3,971,121	-				+0.1
3,971,157	+				-0.7
3,971,205	-		SO3821	0.11	-0.7
3,971,215	+		SO3821	0.12	+1.0
3,971,215	+		SO3821	0.12	-1.0
3,971,215	+		SO3821	0.12	+0.0
3,971,223	-		SO3821	0.12	-1.2
3,971,223	-		SO3821	0.12	+0.2
3,971,238	-		SO3821	0.13	+0.7
3,971,239	-		SO3821	0.14	+0.4
3,971,265	+		SO3821	0.15	+0.8
3,971,275	+		SO3821	0.16	-0.1
3,971,275	+		SO3821	0.16	+0.2
3,971,276	+		SO3821	0.16	+0.1
3,971,283	-		SO3821	0.16	+2.4
3,971,283	-		SO3821	0.16	+0.2
3,971,283	-		SO3821	0.16	+1.1
3,971,283	-		SO3821	0.16	-0.3
3,971,314	+		SO3821	0.18	+0.6
3,971,352	+		SO3821	0.21	-0.8
3,971,372	-		SO3821	0.22	+0.4
3,971,372	-		SO3821	0.22	-0.6
3,971,387	-		SO3821	0.23	-1.1
3,971,399	-		SO3821	0.24	+0.0
3,971,475	-		SO3821	0.29	+0.2
3,971,476	+		SO3821	0.29	+0.0
3,971,515	+		SO3821	0.31	+0.2
3,971,567	-		SO3821	0.35	+0.4
3,971,642	+		SO3821	0.40	-0.3
3,971,642	+		SO3821	0.40	+0.2
3,971,642	+		SO3821	0.40	+0.9
3,971,642	+		SO3821	0.40	-0.1
3,971,642	+		SO3821	0.40	-0.2
3,971,642	+		SO3821	0.40	-1.0
3,971,642	+		SO3821	0.40	-1.1
3,971,650	-		SO3821	0.40	+0.1
3,971,680	+		SO3821	0.42	+0.5
3,971,688	+		SO3821	0.43	+0.5
3,971,688	+		SO3821	0.43	+0.3
3,971,688	+		SO3821	0.43	-1.5
3,971,688	+		SO3821	0.43	-0.2
3,971,688	+		SO3821	0.43	-0.6
3,971,688	+		SO3821	0.43	+0.4
3,971,688	+		SO3821	0.43	-0.9
3,971,688	+		SO3821	0.43	-0.7
3,971,688	+		SO3821	0.43	-0.1
3,971,688	+		SO3821	0.43	-1.4
3,971,688	+		SO3821	0.43	-0.3
3,971,688	+		SO3821	0.43	+2.2
3,971,688	+		SO3821	0.43	+0.1
3,971,688	+		SO3821	0.43	+1.1
3,971,696	-		SO3821	0.43	+0.3
3,971,696	-		SO3821	0.43	-0.7
3,971,696	-		SO3821	0.43	+0.6
3,971,696	-		SO3821	0.43	-0.4
3,971,696	-		SO3821	0.43	+0.1
3,971,696	-		SO3821	0.43	+0.2
3,971,696	-		SO3821	0.43	-1.0
3,971,696	-		SO3821	0.43	+0.0
3,971,696	-		SO3821	0.43	+0.2
3,971,696	-		SO3821	0.43	+1.4
3,971,696	-		SO3821	0.43	-0.5
3,971,696	-		SO3821	0.43	+1.7
3,971,696	-		SO3821	0.43	-0.6
3,971,696	-		SO3821	0.43	-1.5
3,971,809	-		SO3821	0.50	+0.9
3,971,814	-		SO3821	0.51	+0.6
3,971,916	+		SO3821	0.57	+0.0
3,971,917	+		SO3821	0.57	+0.1
3,971,924	-		SO3821	0.58	+0.3
3,971,926	+		SO3821	0.58	+1.5
3,971,926	+		SO3821	0.58	-1.0
3,971,981	-		SO3821	0.61	+0.7
3,971,983	-		SO3821	0.62	+0.5
3,971,998	-		SO3821	0.63	+2.3
3,972,004	+		SO3821	0.63	-0.1
3,972,004	+		SO3821	0.63	-1.7
3,972,010	+		SO3821	0.63	+0.1
3,972,012	-		SO3821	0.63	-0.3
3,972,012	-		SO3821	0.63	-0.1
3,972,040	+		SO3821	0.65	+0.2
3,972,040	+		SO3821	0.65	+0.3
3,972,048	-		SO3821	0.66	-0.6
3,972,079	+		SO3821	0.68	+1.3
3,972,079	+		SO3821	0.68	+3.7
3,972,079	+		SO3821	0.68	+0.2
3,972,079	+		SO3821	0.68	+0.2
3,972,079	+		SO3821	0.68	+0.2
3,972,087	-		SO3821	0.68	-0.2
3,972,087	-		SO3821	0.68	-0.4
3,972,087	-		SO3821	0.68	+0.2
3,972,087	-		SO3821	0.68	-0.8
3,972,087	-		SO3821	0.68	-1.5
3,972,087	-		SO3821	0.68	-1.6
3,972,103	+		SO3821	0.69	+0.7
3,972,104	-		SO3821	0.69	-0.1
3,972,109	-		SO3821	0.70	-0.3
3,972,160	+		SO3821	0.73	+0.4
3,972,245	+		SO3821	0.78	+0.5
3,972,268	+		SO3821	0.80	+0.3
3,972,279	+		SO3821	0.81	-0.1
3,972,288	+		SO3821	0.81	-0.3
3,972,296	-		SO3821	0.82	+1.1
3,972,296	-		SO3821	0.82	-0.6
3,972,296	-		SO3821	0.82	+2.1
3,972,296	-		SO3821	0.82	+0.1
3,972,326	+		SO3821	0.84	+0.5
3,972,331	+		SO3821	0.84	-0.6
3,972,331	+		SO3821	0.84	+0.1
3,972,331	+		SO3821	0.84	-0.5
3,972,331	+		SO3821	0.84	+0.8
3,972,331	+		SO3821	0.84	+0.5
3,972,337	+		SO3821	0.84	+1.1
3,972,337	+		SO3821	0.84	+1.9
3,972,337	+		SO3821	0.84	-0.1
3,972,337	+		SO3821	0.84	+0.9
3,972,337	+		SO3821	0.84	+0.2
3,972,337	+		SO3821	0.84	+0.5
3,972,337	+		SO3821	0.84	+0.1
3,972,337	+		SO3821	0.84	+0.4
3,972,339	-		SO3821	0.85	+2.6
3,972,339	-		SO3821	0.85	+0.4
3,972,339	-		SO3821	0.85	+1.3
3,972,342	+		SO3821	0.85	-0.9
3,972,342	+		SO3821	0.85	-0.2
3,972,342	+		SO3821	0.85	+0.4
3,972,345	-		SO3821	0.85	+2.0
3,972,345	-		SO3821	0.85	-1.0
3,972,345	-		SO3821	0.85	+0.2
3,972,345	-		SO3821	0.85	-1.1
3,972,345	-		SO3821	0.85	+0.1
3,972,345	-		SO3821	0.85	-0.2
3,972,345	-		SO3821	0.85	-0.4
3,972,345	-		SO3821	0.85	+0.3
3,972,345	-		SO3821	0.85	-0.1
3,972,345	-		SO3821	0.85	-0.5
3,972,345	-		SO3821	0.85	+0.4
3,972,345	-		SO3821	0.85	+0.1
3,972,350	+		SO3821	0.85	-0.2
3,972,353	-		SO3821	0.85	+0.7
3,972,360	-		SO3821	0.86	+0.9
3,972,360	-		SO3821	0.86	+1.0
3,972,361	+		SO3821	0.86	+0.4
3,972,361	+		SO3821	0.86	+0.1
3,972,396	+		SO3821	0.88	+0.6
3,972,404	+		SO3821	0.89	-2.9
3,972,404	-		SO3821	0.89	-1.2
3,972,404	-		SO3821	0.89	-1.0
3,972,404	-		SO3821	0.89	+0.8
3,972,404	-		SO3821	0.89	+1.4
3,972,406	+		SO3821	0.89	+0.3
3,972,412	+		SO3821	0.89	-0.1
3,972,412	-		SO3821	0.89	+0.8
3,972,413	+		SO3821	0.89	-1.1
3,972,414	-		SO3821	0.89	-0.1
3,972,414	-		SO3821	0.89	-0.2
3,972,420	-		SO3821	0.90	-3.6
3,972,421	-		SO3821	0.90	-0.0
3,972,456	+				+1.1
3,972,463	-				-0.4
3,972,464	-				+0.8
3,972,483	-				+0.0
3,972,488	-				+0.1
3,972,488	-				+0.1
3,972,488	-				+0.9
3,972,606	+				+1.4
3,972,606	+				+1.6
3,972,614	-				-0.0
3,972,626	+				-0.1
3,972,626	+				+0.4
3,972,626	+				-0.6
3,972,626	+				-0.5
3,972,626	+				-1.3
3,972,626	+				+1.5
3,972,626	+				-0.3
3,972,628	-				+0.9
3,972,629	-				-2.5
3,972,634	-				+2.4
3,972,634	-				-0.2
3,972,634	-				-0.3
3,972,639	-				+1.1
3,972,646	+				+0.3
3,972,673	+				-2.2
3,972,683	+				+0.6
3,972,683	+				+0.6
3,972,683	+				+0.6
3,972,683	+				-0.1
3,972,683	+				+0.4
3,972,683	-				+0.3
3,972,691	-				+0.9
3,972,709	+				+0.2
3,972,712	-				+1.5
3,972,712	-				-0.5
3,972,778	+		SO3822	0.13	-0.7
3,972,785	-				-0.5
3,972,789	+		SO3822	0.14	-0.2
3,972,789	+		SO3822	0.14	+0.0
3,972,795	+		SO3822	0.15	-0.8
3,972,797	-		SO3822	0.15	+0.1
3,972,797	-		SO3822	0.15	+0.1
3,972,797	-		SO3822	0.15	-0.2
3,972,803	-		SO3822	0.16	+0.3
3,972,805	-		SO3822	0.16	-1.5
3,972,824	+		SO3822	0.18	-0.3
3,972,830	+		SO3822	0.19	+2.1
3,972,838	-		SO3822	0.20	-0.2
3,972,848	+		SO3822	0.21	-1.0
3,972,848	+		SO3822	0.21	-0.3
3,972,848	+		SO3822	0.21	+0.7
3,972,848	+		SO3822	0.21	+0.1
3,972,848	+		SO3822	0.21	-0.6
3,972,848	+		SO3822	0.21	-1.7
3,972,856	-		SO3822	0.22	+0.3
3,972,856	-		SO3822	0.22	+1.1
3,972,856	-		SO3822	0.22	+1.1
3,972,856	-		SO3822	0.22	-0.5
3,972,856	-		SO3822	0.22	+1.2
3,972,856	-		SO3822	0.22	+0.0
3,972,856	-		SO3822	0.22	-0.4
3,972,856	-		SO3822	0.22	+1.1
3,972,856	-		SO3822	0.22	+0.1
3,972,856	-		SO3822	0.22	-0.5
3,972,856	-		SO3822	0.22	+0.2
3,972,856	-		SO3822	0.22	-1.2
3,972,865	+		SO3822	0.23	-0.3
3,972,870	+		SO3822	0.23	+0.0
3,972,873	-		SO3822	0.24	-0.6
3,972,873	-		SO3822	0.24	-1.0
3,972,873	-		SO3822	0.24	-0.1
3,972,873	-		SO3822	0.24	+1.1
3,972,873	-		SO3822	0.24	+0.5
3,972,873	-		SO3822	0.24	+0.6
3,972,873	-		SO3822	0.24	+0.0
3,972,879	+		SO3822	0.24	+0.5
3,972,887	-		SO3822	0.25	-3.2
3,972,892	-		SO3822	0.26	+1.0
3,972,892	-		SO3822	0.26	-0.4
3,972,892	-		SO3822	0.26	+0.2
3,972,924	-		SO3822	0.30	+1.1
3,972,955	-		SO3822	0.33	+0.6
3,972,983	-		SO3822	0.36	+0.2
3,973,017	+		SO3822	0.40	+1.2
3,973,025	-		SO3822	0.41	-0.8
3,973,034	-		SO3822	0.42	-1.6
3,973,045	-		SO3822	0.43	+0.7
3,973,052	+		SO3822	0.44	-0.0
3,973,060	-		SO3822	0.45	-0.6
3,973,090	-		SO3822	0.49	+1.0
3,973,090	-		SO3822	0.49	-0.9
3,973,118	+		SO3822	0.52	-1.6
3,973,118	+		SO3822	0.52	-0.8
3,973,118	+		SO3822	0.52	+0.9
3,973,118	+		SO3822	0.52	-1.0
3,973,126	-		SO3822	0.53	+0.3
3,973,126	-		SO3822	0.53	+0.3
3,973,126	-		SO3822	0.53	+0.3
3,973,126	-		SO3822	0.53	+0.4
3,973,126	-		SO3822	0.53	+0.1
3,973,167	-		SO3822	0.57	+0.4
3,973,234	+		SO3822	0.65	+3.2
3,973,236	-		SO3822	0.65	+0.1
3,973,244	+		SO3822	0.66	-0.3
3,973,244	+		SO3822	0.66	+0.2
3,973,244	+		SO3822	0.66	+1.3
3,973,244	+		SO3822	0.66	-0.6
3,973,252	-		SO3822	0.67	-2.7
3,973,252	-		SO3822	0.67	-0.4
3,973,252	-		SO3822	0.67	-0.0
3,973,294	-		SO3822	0.72	-1.1
3,973,328	+		SO3822	0.76	+0.3
3,973,328	+		SO3822	0.76	+0.2
3,973,328	+		SO3822	0.76	+1.1
3,973,328	+		SO3822	0.76	+0.4
3,973,328	+		SO3822	0.76	+0.6
3,973,328	+		SO3822	0.76	-0.7
3,973,328	+		SO3822	0.76	-0.1
3,973,336	-		SO3822	0.77	-0.1
3,973,336	-		SO3822	0.77	+0.2
3,973,364	+		SO3822	0.80	+0.4
3,973,364	+		SO3822	0.80	-1.4
3,973,398	+		SO3822	0.84	-0.3
3,973,406	-		SO3822	0.85	+0.3
3,973,408	+		SO3822	0.85	+0.3
3,973,408	+		SO3822	0.85	+0.3
3,973,408	+		SO3822	0.85	-0.2
3,973,408	+		SO3822	0.85	-0.2
3,973,408	+		SO3822	0.85	+0.6
3,973,408	+		SO3822	0.85	+1.3
3,973,409	+		SO3822	0.85	+0.2
3,973,416	-		SO3822	0.86	+0.0
3,973,416	-		SO3822	0.86	+2.0
3,973,416	-		SO3822	0.86	+0.1
3,973,416	-		SO3822	0.86	+0.2
3,973,433	-		SO3822	0.88	-0.2
3,973,453	+				+1.0
3,973,453	+				-1.2
3,973,453	+				+0.5
3,973,454	+				+0.0
3,973,454	+				+0.1
3,973,454	+				+0.7
3,973,454	+				+0.2
3,973,454	+				+0.8
3,973,461	-				-0.0
3,973,461	-				-1.2
3,973,461	-				-0.2
3,973,461	-				+0.9
3,973,461	-				+0.1
3,973,461	-				-0.2
3,973,461	-				+0.3
3,973,461	-				-0.3
3,973,461	-				+0.4
3,973,461	-				+0.1
3,973,461	-				+0.1
3,973,462	-				+0.4
3,973,462	-				-1.6
3,973,463	-				-0.2
3,973,463	-				-0.9
3,973,486	+				-0.7
3,973,486	+				-0.6
3,973,486	+				+1.4
3,973,486	+				+1.1
3,973,486	+				-0.1
3,973,486	+				-0.8
3,973,486	+				-0.0
3,973,492	+				+0.6
3,973,492	+				-0.7
3,973,493	-				+0.6
3,973,494	-				-0.1
3,973,494	-				-0.0
3,973,494	-				+0.4
3,973,494	-				-0.3
3,973,494	-				+0.4
3,973,494	-				+0.5
3,973,494	-				+1.8
3,973,494	-				-1.1
3,973,494	-				-1.5
3,973,494	-				-0.1
3,973,494	-				-0.7
3,973,500	-				+0.4
3,973,500	-				-2.5
3,973,500	-				+1.9
3,973,500	-				-0.1
3,973,511	-				+0.2
3,973,556	+				+0.8
3,973,569	+				+0.4
3,973,577	-				-1.2