Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS20200

Experiment: RCH2_defined_noCarbon with Brachypodium distachyon 27-day exudates 3 x

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RCH2_defined_noCarbon with Brachypodium distachyon 27-day exudates 3 x
4,231,657	-		BWI76_RS20190	0.23	-0.5
4,231,908	+		BWI76_RS20190	0.80	+0.2
4,231,926	-		BWI76_RS20190	0.84	-0.9
4,232,281	-				-0.2
4,232,334	-				-0.2
4,232,434	-				-0.3
4,232,691	-				+0.5
4,232,705	-				+0.3
4,232,874	+		BWI76_RS20200	0.24	+0.6
4,232,962	-		BWI76_RS20200	0.34	-0.2
4,232,962	-		BWI76_RS20200	0.34	+0.5
4,233,128	-		BWI76_RS20200	0.52	+1.4
4,233,134	+		BWI76_RS20200	0.52	-1.5
4,233,135	-		BWI76_RS20200	0.52	+2.3
4,233,264	+		BWI76_RS20200	0.66	+0.8
4,233,315	-		BWI76_RS20200	0.72	+0.2
4,233,434	-		BWI76_RS20200	0.85	+0.1
4,233,464	+		BWI76_RS20200	0.88	-2.1
4,233,470	-		BWI76_RS20200	0.88	+0.3
4,233,472	-		BWI76_RS20200	0.89	+1.4
4,233,532	-				+0.0
4,233,532	-				-0.9
4,233,532	-				-2.2
4,233,594	-				+0.5
4,233,594	-				-1.0
4,233,594	-				-0.1
4,233,601	+				-0.6
4,233,601	+				-0.0
4,233,601	+				-1.8
4,233,601	+				-1.7
4,233,601	+				-0.0
4,233,601	+				+1.9
4,233,604	-				+0.2
4,233,604	-				-0.7
4,233,604	-				-0.9
4,233,604	-				-0.6
4,233,604	-				-2.0
4,233,609	-				-2.7
4,233,614	-				+0.8
4,233,615	+				+0.3
4,233,634	-				-2.7
4,233,635	-				+1.2
4,233,646	+				+1.1
4,233,646	+				+0.1
4,233,646	+				+1.0
4,233,646	+				-2.8
4,233,646	+				+0.7
4,233,646	+				-0.4
4,233,647	+				-0.6
4,233,654	-				-0.9
4,233,654	-				+0.6
4,233,654	-				-0.2
4,233,654	-				+0.2
4,233,654	-				-0.2
4,233,654	-				-0.9
4,233,654	-				+0.5
4,233,654	-				-1.0
4,233,654	-				-0.9
4,233,654	-				-0.8
4,233,654	-				-0.9
4,233,654	-				-1.7
4,233,654	-				-1.8
4,233,654	-				-0.9
4,233,675	-				-1.1
4,233,675	-				-0.7
4,233,675	-				-0.0
4,233,680	-				-0.1
4,233,721	+				-0.1
4,233,724	-				+0.3
4,233,724	-				-0.0
4,233,724	-				-0.6
4,233,725	-				-0.4
4,233,735	-				-0.5
4,233,735	-				-1.6
4,233,740	+				-2.5
4,233,770	-				-0.8
4,233,777	-				+1.0
4,233,828	+				+2.0
4,233,838	-				-0.0
4,233,840	+				-2.5
4,233,840	+				+0.3
4,233,840	+				-0.6
4,233,848	-				+0.6
4,233,848	-				-2.9
4,233,862	+				-2.5
4,233,864	-				-1.0
4,233,905	+				-0.5
4,233,930	+				-1.6
4,233,934	+				-2.6
4,233,938	-				+0.5
4,233,940	+				-1.6
4,233,940	+				-2.7
4,233,940	+				-1.0
4,233,942	-				-0.5
4,233,948	-				+1.0
4,233,948	-				-0.0
4,233,948	-				-0.2
4,233,948	-				-3.7
4,233,948	-				-1.4
4,233,948	-				-0.4
4,233,948	-				+0.9
4,233,960	+				+1.5
4,233,968	-				-1.9
4,234,002	-				-0.6
4,234,004	+				+1.0
4,234,004	+				-1.0
4,234,004	+				+0.1
4,234,012	-				-1.0
4,234,012	-				-1.2
4,234,012	-				-2.5
4,234,012	-				+1.2
4,234,012	-				-0.5
4,234,012	-				-2.2
4,234,012	-				-0.6
4,234,086	-				-1.4
4,234,086	-				+0.5
4,234,086	-				-0.4
4,234,153	-				+1.4
4,234,177	-				+2.0
4,234,377	-				+0.2
4,234,402	+				+1.0
4,234,404	+				-1.2
4,234,404	+				-0.0
4,234,410	-				-0.8
4,234,414	+				-0.2
4,234,442	-				-0.9
4,234,460	+				+1.3
4,234,468	-				-0.6
4,234,468	-				-0.3
4,234,468	-				+0.1
4,234,509	-				-0.5
4,234,512	-				-0.4
4,234,534	-				-0.3