Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS16990
Experiment: RCH2_defined_noCarbon with Brachypodium distachyon 27-day exudates 3 x
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | RCH2_defined_noCarbon with Brachypodium distachyon 27-day exudates 3 x |
---|---|---|---|---|---|
remove | |||||
3,522,647 | + | BWI76_RS16985 | 0.26 | -0.1 | |
3,523,572 | - | -0.2 | |||
3,523,977 | - | BWI76_RS16990 | 0.55 | -1.0 | |
3,524,182 | - | BWI76_RS16990 | 0.82 | -0.7 | |
3,524,257 | - | -0.7 | |||
3,524,529 | - | BWI76_RS16995 | 0.13 | -0.0 | |
3,524,607 | + | BWI76_RS16995 | 0.19 | -2.2 | |
3,524,757 | + | BWI76_RS16995 | 0.29 | +0.9 | |
3,524,899 | - | BWI76_RS16995 | 0.38 | -0.1 | |
3,525,230 | + | BWI76_RS16995 | 0.61 | +0.6 |
Or see this region's nucleotide sequence