Experiment: Carbon source Sucrose 10 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_21470 and AO356_21475 overlap by 4 nucleotides AO356_21475 and AO356_21480 are separated by 103 nucleotides AO356_21480 and AO356_21485 are separated by 58 nucleotides AO356_21485 and AO356_21490 are separated by 89 nucleotides AO356_21490 and AO356_21495 are separated by 189 nucleotides
AO356_21470: AO356_21470 - O-succinylhomoserine sulfhydrylase, at 4,814,530 to 4,815,741
_21470
AO356_21475: AO356_21475 - oxidoreductase, at 4,815,738 to 4,816,511
_21475
AO356_21480: AO356_21480 - tRNA-Val, at 4,816,615 to 4,816,690
_21480
AO356_21485: AO356_21485 - tRNA-Asp, at 4,816,749 to 4,816,825
_21485
AO356_21490: AO356_21490 - tRNA-Asp, at 4,816,915 to 4,816,991
_21490
AO356_21495: AO356_21495 - gamma-glutamylputrescine oxidase (EC 1.4.3.-) <small>(from data)</small>, at 4,817,181 to 4,818,464
_21495
Position (kb) 4816
4817 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 4816.072 kb on - strand, within AO356_21475 at 4816.138 kb on - strand, within AO356_21475 at 4816.215 kb on + strand, within AO356_21475 at 4816.216 kb on - strand, within AO356_21475 at 4816.216 kb on - strand, within AO356_21475 at 4816.399 kb on + strand, within AO356_21475 at 4816.503 kb on + strand at 4816.503 kb on + strand at 4816.572 kb on - strand at 4816.826 kb on + strand at 4817.026 kb on + strand at 4817.026 kb on + strand at 4817.026 kb on + strand at 4817.026 kb on + strand at 4817.046 kb on + strand at 4817.110 kb on + strand at 4817.195 kb on + strand at 4817.212 kb on + strand at 4817.353 kb on + strand, within AO356_21495 at 4817.353 kb on + strand, within AO356_21495 at 4817.353 kb on + strand, within AO356_21495 at 4817.354 kb on - strand, within AO356_21495 at 4817.354 kb on - strand, within AO356_21495 at 4817.354 kb on - strand, within AO356_21495 at 4817.386 kb on + strand, within AO356_21495 at 4817.389 kb on + strand, within AO356_21495 at 4817.389 kb on + strand, within AO356_21495 at 4817.389 kb on + strand, within AO356_21495 at 4817.389 kb on + strand, within AO356_21495 at 4817.390 kb on - strand, within AO356_21495 at 4817.390 kb on - strand, within AO356_21495 at 4817.390 kb on - strand, within AO356_21495 at 4817.390 kb on - strand, within AO356_21495 at 4817.390 kb on - strand, within AO356_21495 at 4817.390 kb on - strand, within AO356_21495 at 4817.397 kb on - strand, within AO356_21495 at 4817.461 kb on + strand, within AO356_21495 at 4817.461 kb on + strand, within AO356_21495 at 4817.551 kb on + strand, within AO356_21495 at 4817.551 kb on + strand, within AO356_21495 at 4817.551 kb on + strand, within AO356_21495 at 4817.552 kb on - strand, within AO356_21495 at 4817.552 kb on - strand, within AO356_21495 at 4817.603 kb on - strand, within AO356_21495 at 4817.603 kb on - strand, within AO356_21495 at 4817.614 kb on + strand, within AO356_21495 at 4817.614 kb on + strand, within AO356_21495 at 4817.614 kb on + strand, within AO356_21495 at 4817.615 kb on - strand, within AO356_21495 at 4817.615 kb on - strand, within AO356_21495 at 4817.635 kb on + strand, within AO356_21495 at 4817.635 kb on + strand, within AO356_21495
Per-strain Table
Position Strand Gene LocusTag Fraction Carbon source Sucrose 10 mM remove 4,816,072 - AO356_21475 0.43 +0.2 4,816,138 - AO356_21475 0.52 +0.9 4,816,215 + AO356_21475 0.62 +1.0 4,816,216 - AO356_21475 0.62 -0.2 4,816,216 - AO356_21475 0.62 -0.2 4,816,399 + AO356_21475 0.85 -0.2 4,816,503 + -0.5 4,816,503 + +1.2 4,816,572 - -0.6 4,816,826 + +1.1 4,817,026 + +0.1 4,817,026 + +0.1 4,817,026 + -1.0 4,817,026 + -0.9 4,817,046 + +0.6 4,817,110 + +0.2 4,817,195 + +0.8 4,817,212 + +0.3 4,817,353 + AO356_21495 0.13 -0.6 4,817,353 + AO356_21495 0.13 +0.3 4,817,353 + AO356_21495 0.13 -0.5 4,817,354 - AO356_21495 0.13 +0.1 4,817,354 - AO356_21495 0.13 +0.5 4,817,354 - AO356_21495 0.13 -0.1 4,817,386 + AO356_21495 0.16 +1.3 4,817,389 + AO356_21495 0.16 -2.9 4,817,389 + AO356_21495 0.16 +0.0 4,817,389 + AO356_21495 0.16 +0.5 4,817,389 + AO356_21495 0.16 +0.8 4,817,390 - AO356_21495 0.16 -1.4 4,817,390 - AO356_21495 0.16 -0.6 4,817,390 - AO356_21495 0.16 +1.6 4,817,390 - AO356_21495 0.16 +0.6 4,817,390 - AO356_21495 0.16 +0.1 4,817,390 - AO356_21495 0.16 +0.1 4,817,397 - AO356_21495 0.17 -0.6 4,817,461 + AO356_21495 0.22 -2.4 4,817,461 + AO356_21495 0.22 +1.8 4,817,551 + AO356_21495 0.29 -0.2 4,817,551 + AO356_21495 0.29 -0.0 4,817,551 + AO356_21495 0.29 +0.4 4,817,552 - AO356_21495 0.29 -1.0 4,817,552 - AO356_21495 0.29 +0.8 4,817,603 - AO356_21495 0.33 +0.4 4,817,603 - AO356_21495 0.33 -0.0 4,817,614 + AO356_21495 0.34 -0.4 4,817,614 + AO356_21495 0.34 -1.4 4,817,614 + AO356_21495 0.34 -0.4 4,817,615 - AO356_21495 0.34 -0.3 4,817,615 - AO356_21495 0.34 -0.0 4,817,635 + AO356_21495 0.35 +1.4 4,817,635 + AO356_21495 0.35 +0.4
Or see this region's nucleotide sequence