Experiment: Carbon source Sucrose 10 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_18115 and AO356_18120 are separated by 129 nucleotides AO356_18120 and AO356_18125 are separated by 250 nucleotides
AO356_18115: AO356_18115 - transporter, at 4,082,125 to 4,083,036
_18115
AO356_18120: AO356_18120 - MFS transporter, at 4,083,166 to 4,084,353
_18120
AO356_18125: AO356_18125 - copper resistance protein CopD, at 4,084,604 to 4,085,515
_18125
Position (kb)
4083
4084
4085 Strain fitness (log2 ratio)
-2
-1
0
1 at 4082.274 kb on - strand, within AO356_18115 at 4082.279 kb on + strand, within AO356_18115 at 4082.363 kb on + strand, within AO356_18115 at 4082.363 kb on + strand, within AO356_18115 at 4082.364 kb on - strand, within AO356_18115 at 4082.537 kb on + strand, within AO356_18115 at 4082.537 kb on + strand, within AO356_18115 at 4082.537 kb on + strand, within AO356_18115 at 4082.538 kb on - strand, within AO356_18115 at 4082.698 kb on + strand, within AO356_18115 at 4082.698 kb on + strand, within AO356_18115 at 4082.698 kb on + strand, within AO356_18115 at 4082.699 kb on - strand, within AO356_18115 at 4082.699 kb on - strand, within AO356_18115 at 4082.735 kb on + strand, within AO356_18115 at 4082.735 kb on + strand, within AO356_18115 at 4082.735 kb on + strand, within AO356_18115 at 4082.735 kb on + strand, within AO356_18115 at 4082.735 kb on + strand, within AO356_18115 at 4082.735 kb on + strand, within AO356_18115 at 4082.736 kb on - strand, within AO356_18115 at 4082.765 kb on + strand, within AO356_18115 at 4082.766 kb on - strand, within AO356_18115 at 4082.795 kb on + strand, within AO356_18115 at 4082.795 kb on + strand, within AO356_18115 at 4082.796 kb on - strand, within AO356_18115 at 4082.796 kb on - strand, within AO356_18115 at 4082.796 kb on - strand, within AO356_18115 at 4083.045 kb on + strand at 4083.045 kb on + strand at 4083.045 kb on + strand at 4083.046 kb on - strand at 4083.046 kb on - strand at 4083.167 kb on + strand at 4083.168 kb on - strand at 4083.168 kb on - strand at 4083.168 kb on - strand at 4083.168 kb on - strand at 4083.174 kb on + strand at 4083.174 kb on + strand at 4083.174 kb on + strand at 4083.175 kb on - strand at 4083.175 kb on - strand at 4084.384 kb on - strand at 4084.384 kb on - strand at 4084.384 kb on - strand at 4084.384 kb on - strand at 4084.402 kb on - strand at 4084.510 kb on + strand at 4084.590 kb on + strand at 4084.590 kb on + strand at 4084.590 kb on + strand at 4084.590 kb on + strand at 4084.590 kb on + strand at 4084.591 kb on - strand at 4084.591 kb on - strand at 4084.830 kb on + strand, within AO356_18125 at 4084.830 kb on + strand, within AO356_18125 at 4084.830 kb on + strand, within AO356_18125 at 4084.830 kb on + strand, within AO356_18125 at 4084.830 kb on + strand, within AO356_18125 at 4084.830 kb on + strand, within AO356_18125 at 4084.831 kb on - strand, within AO356_18125 at 4084.831 kb on - strand, within AO356_18125 at 4084.831 kb on - strand, within AO356_18125 at 4084.831 kb on - strand, within AO356_18125 at 4084.831 kb on - strand, within AO356_18125 at 4084.831 kb on - strand, within AO356_18125 at 4084.831 kb on - strand, within AO356_18125 at 4084.831 kb on - strand, within AO356_18125 at 4084.831 kb on - strand, within AO356_18125 at 4084.878 kb on + strand, within AO356_18125 at 4084.878 kb on + strand, within AO356_18125 at 4084.879 kb on - strand, within AO356_18125 at 4084.879 kb on - strand, within AO356_18125 at 4084.879 kb on - strand, within AO356_18125 at 4084.879 kb on - strand, within AO356_18125 at 4084.879 kb on - strand, within AO356_18125 at 4084.879 kb on - strand, within AO356_18125 at 4084.879 kb on - strand, within AO356_18125 at 4084.879 kb on - strand, within AO356_18125 at 4084.879 kb on - strand, within AO356_18125 at 4084.879 kb on - strand, within AO356_18125 at 4084.879 kb on - strand, within AO356_18125 at 4084.879 kb on - strand, within AO356_18125
Per-strain Table
Position Strand Gene LocusTag Fraction Carbon source Sucrose 10 mM remove 4,082,274 - AO356_18115 0.16 +1.2 4,082,279 + AO356_18115 0.17 +0.7 4,082,363 + AO356_18115 0.26 +0.3 4,082,363 + AO356_18115 0.26 +0.1 4,082,364 - AO356_18115 0.26 -0.4 4,082,537 + AO356_18115 0.45 -0.7 4,082,537 + AO356_18115 0.45 +0.8 4,082,537 + AO356_18115 0.45 -0.3 4,082,538 - AO356_18115 0.45 -1.4 4,082,698 + AO356_18115 0.63 +1.1 4,082,698 + AO356_18115 0.63 +0.2 4,082,698 + AO356_18115 0.63 -2.2 4,082,699 - AO356_18115 0.63 +0.7 4,082,699 - AO356_18115 0.63 -0.1 4,082,735 + AO356_18115 0.67 -0.8 4,082,735 + AO356_18115 0.67 -2.0 4,082,735 + AO356_18115 0.67 +0.2 4,082,735 + AO356_18115 0.67 +0.4 4,082,735 + AO356_18115 0.67 -1.0 4,082,735 + AO356_18115 0.67 +0.1 4,082,736 - AO356_18115 0.67 +1.0 4,082,765 + AO356_18115 0.70 -1.5 4,082,766 - AO356_18115 0.70 +0.1 4,082,795 + AO356_18115 0.73 -2.0 4,082,795 + AO356_18115 0.73 -1.9 4,082,796 - AO356_18115 0.74 -0.5 4,082,796 - AO356_18115 0.74 +1.2 4,082,796 - AO356_18115 0.74 -1.0 4,083,045 + -1.2 4,083,045 + -0.0 4,083,045 + -1.0 4,083,046 - -1.1 4,083,046 - +0.3 4,083,167 + -0.3 4,083,168 - +0.4 4,083,168 - +0.9 4,083,168 - -0.2 4,083,168 - -0.6 4,083,174 + -0.2 4,083,174 + -0.3 4,083,174 + -0.8 4,083,175 - -0.5 4,083,175 - -0.6 4,084,384 - -0.4 4,084,384 - +0.3 4,084,384 - -0.1 4,084,384 - +1.3 4,084,402 - +0.7 4,084,510 + -0.2 4,084,590 + -0.7 4,084,590 + -0.2 4,084,590 + +0.1 4,084,590 + -1.3 4,084,590 + -0.2 4,084,591 - +0.1 4,084,591 - +0.9 4,084,830 + AO356_18125 0.25 -2.0 4,084,830 + AO356_18125 0.25 +0.0 4,084,830 + AO356_18125 0.25 -0.7 4,084,830 + AO356_18125 0.25 +0.4 4,084,830 + AO356_18125 0.25 +1.2 4,084,830 + AO356_18125 0.25 +1.3 4,084,831 - AO356_18125 0.25 -1.1 4,084,831 - AO356_18125 0.25 +0.3 4,084,831 - AO356_18125 0.25 +0.6 4,084,831 - AO356_18125 0.25 -0.1 4,084,831 - AO356_18125 0.25 +0.6 4,084,831 - AO356_18125 0.25 -0.2 4,084,831 - AO356_18125 0.25 +0.1 4,084,831 - AO356_18125 0.25 -0.4 4,084,831 - AO356_18125 0.25 -1.1 4,084,878 + AO356_18125 0.30 -1.3 4,084,878 + AO356_18125 0.30 -0.4 4,084,879 - AO356_18125 0.30 +0.9 4,084,879 - AO356_18125 0.30 -1.2 4,084,879 - AO356_18125 0.30 +1.0 4,084,879 - AO356_18125 0.30 +0.2 4,084,879 - AO356_18125 0.30 +0.1 4,084,879 - AO356_18125 0.30 +0.1 4,084,879 - AO356_18125 0.30 +0.2 4,084,879 - AO356_18125 0.30 +1.3 4,084,879 - AO356_18125 0.30 +0.9 4,084,879 - AO356_18125 0.30 +0.4 4,084,879 - AO356_18125 0.30 -0.4 4,084,879 - AO356_18125 0.30 -2.0
Or see this region's nucleotide sequence