Experiment: Carbon source Sucrose 10 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_15810 and AO356_15815 are separated by 291 nucleotides AO356_15815 and AO356_15820 are separated by 9 nucleotides AO356_15820 and AO356_15825 are separated by 172 nucleotides
AO356_15810: AO356_15810 - GTPase CgtA, at 3,580,772 to 3,581,995
_15810
AO356_15815: AO356_15815 - gamma-glutamyl kinase, at 3,582,287 to 3,583,405
_15815
AO356_15820: AO356_15820 - hypothetical protein, at 3,583,415 to 3,583,879
_15820
AO356_15825: AO356_15825 - 30S ribosomal protein S20, at 3,584,052 to 3,584,330
_15825
Position (kb)
3582
3583
3584 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3581.981 kb on + strand at 3581.981 kb on + strand at 3581.981 kb on + strand at 3582.007 kb on + strand at 3582.007 kb on + strand at 3582.008 kb on - strand at 3582.085 kb on + strand at 3582.085 kb on + strand at 3582.085 kb on + strand at 3582.085 kb on + strand at 3582.085 kb on + strand at 3582.085 kb on + strand at 3582.085 kb on + strand at 3582.086 kb on - strand at 3582.086 kb on - strand at 3582.086 kb on - strand at 3582.086 kb on - strand at 3582.086 kb on - strand at 3582.086 kb on - strand at 3582.086 kb on - strand at 3582.086 kb on - strand at 3582.086 kb on - strand at 3582.086 kb on - strand at 3582.086 kb on - strand at 3582.086 kb on - strand at 3582.086 kb on - strand at 3582.156 kb on + strand at 3582.156 kb on + strand at 3582.156 kb on + strand at 3582.211 kb on + strand at 3582.211 kb on + strand at 3582.211 kb on + strand at 3582.217 kb on + strand at 3582.228 kb on + strand at 3582.228 kb on + strand at 3582.234 kb on + strand at 3582.234 kb on + strand at 3582.234 kb on + strand at 3583.177 kb on + strand, within AO356_15815 at 3583.177 kb on + strand, within AO356_15815 at 3583.404 kb on - strand at 3583.578 kb on - strand, within AO356_15820 at 3583.578 kb on - strand, within AO356_15820 at 3583.578 kb on - strand, within AO356_15820 at 3583.723 kb on + strand, within AO356_15820 at 3583.723 kb on + strand, within AO356_15820 at 3583.723 kb on + strand, within AO356_15820 at 3583.723 kb on + strand, within AO356_15820 at 3583.723 kb on + strand, within AO356_15820 at 3583.723 kb on + strand, within AO356_15820 at 3583.724 kb on - strand, within AO356_15820 at 3583.724 kb on - strand, within AO356_15820 at 3583.724 kb on - strand, within AO356_15820 at 3583.724 kb on - strand, within AO356_15820 at 3583.724 kb on - strand, within AO356_15820 at 3583.724 kb on - strand, within AO356_15820 at 3583.777 kb on + strand, within AO356_15820 at 3583.777 kb on + strand, within AO356_15820 at 3583.777 kb on + strand, within AO356_15820 at 3583.778 kb on - strand, within AO356_15820 at 3583.778 kb on - strand, within AO356_15820 at 3583.778 kb on - strand, within AO356_15820 at 3583.778 kb on - strand, within AO356_15820 at 3583.778 kb on - strand, within AO356_15820 at 3583.780 kb on + strand, within AO356_15820 at 3583.780 kb on + strand, within AO356_15820 at 3583.780 kb on + strand, within AO356_15820 at 3583.780 kb on + strand, within AO356_15820 at 3583.780 kb on + strand, within AO356_15820 at 3583.781 kb on - strand, within AO356_15820 at 3583.781 kb on - strand, within AO356_15820 at 3583.781 kb on - strand, within AO356_15820 at 3583.781 kb on - strand, within AO356_15820 at 3583.781 kb on - strand, within AO356_15820 at 3583.790 kb on + strand, within AO356_15820 at 3583.790 kb on + strand, within AO356_15820 at 3583.790 kb on + strand, within AO356_15820 at 3583.791 kb on - strand, within AO356_15820 at 3583.791 kb on - strand, within AO356_15820 at 3583.799 kb on + strand, within AO356_15820 at 3583.799 kb on + strand, within AO356_15820 at 3583.877 kb on + strand at 3583.878 kb on - strand at 3583.888 kb on + strand at 3583.888 kb on + strand at 3583.888 kb on + strand at 3583.889 kb on - strand at 3583.889 kb on - strand at 3583.889 kb on - strand at 3583.889 kb on - strand at 3583.889 kb on - strand at 3583.889 kb on - strand at 3583.889 kb on - strand at 3583.889 kb on - strand at 3583.889 kb on - strand at 3583.931 kb on + strand at 3583.931 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Carbon source Sucrose 10 mM remove 3,581,981 + +1.3 3,581,981 + -0.8 3,581,981 + -0.7 3,582,007 + -0.1 3,582,007 + +1.0 3,582,008 - -1.9 3,582,085 + -0.5 3,582,085 + -1.2 3,582,085 + -0.9 3,582,085 + +1.1 3,582,085 + +1.8 3,582,085 + +0.6 3,582,085 + +0.6 3,582,086 - +1.1 3,582,086 - +0.5 3,582,086 - -0.4 3,582,086 - +0.3 3,582,086 - +0.1 3,582,086 - +0.3 3,582,086 - +0.9 3,582,086 - +0.1 3,582,086 - +0.3 3,582,086 - -1.2 3,582,086 - -0.7 3,582,086 - -0.5 3,582,086 - -0.3 3,582,156 + +0.8 3,582,156 + -0.9 3,582,156 + +0.1 3,582,211 + -0.1 3,582,211 + +0.1 3,582,211 + +0.1 3,582,217 + +0.4 3,582,228 + +0.4 3,582,228 + +0.5 3,582,234 + +0.1 3,582,234 + -1.0 3,582,234 + -1.0 3,583,177 + AO356_15815 0.80 -3.5 3,583,177 + AO356_15815 0.80 -1.7 3,583,404 - -0.2 3,583,578 - AO356_15820 0.35 -0.2 3,583,578 - AO356_15820 0.35 +0.2 3,583,578 - AO356_15820 0.35 -0.5 3,583,723 + AO356_15820 0.66 -2.1 3,583,723 + AO356_15820 0.66 +0.0 3,583,723 + AO356_15820 0.66 -0.6 3,583,723 + AO356_15820 0.66 +0.6 3,583,723 + AO356_15820 0.66 +1.1 3,583,723 + AO356_15820 0.66 -0.5 3,583,724 - AO356_15820 0.66 -1.0 3,583,724 - AO356_15820 0.66 +0.5 3,583,724 - AO356_15820 0.66 -1.0 3,583,724 - AO356_15820 0.66 -2.1 3,583,724 - AO356_15820 0.66 +0.2 3,583,724 - AO356_15820 0.66 +1.4 3,583,777 + AO356_15820 0.78 +1.2 3,583,777 + AO356_15820 0.78 +1.1 3,583,777 + AO356_15820 0.78 +0.4 3,583,778 - AO356_15820 0.78 +0.3 3,583,778 - AO356_15820 0.78 +0.4 3,583,778 - AO356_15820 0.78 -0.7 3,583,778 - AO356_15820 0.78 +1.3 3,583,778 - AO356_15820 0.78 +0.6 3,583,780 + AO356_15820 0.78 -1.4 3,583,780 + AO356_15820 0.78 -1.0 3,583,780 + AO356_15820 0.78 -0.4 3,583,780 + AO356_15820 0.78 +0.2 3,583,780 + AO356_15820 0.78 +0.0 3,583,781 - AO356_15820 0.79 +0.6 3,583,781 - AO356_15820 0.79 +0.1 3,583,781 - AO356_15820 0.79 -0.5 3,583,781 - AO356_15820 0.79 +2.0 3,583,781 - AO356_15820 0.79 -0.4 3,583,790 + AO356_15820 0.81 +0.6 3,583,790 + AO356_15820 0.81 -0.5 3,583,790 + AO356_15820 0.81 +0.3 3,583,791 - AO356_15820 0.81 -1.7 3,583,791 - AO356_15820 0.81 +0.1 3,583,799 + AO356_15820 0.83 +0.1 3,583,799 + AO356_15820 0.83 +0.9 3,583,877 + +0.5 3,583,878 - +0.7 3,583,888 + +2.0 3,583,888 + -0.2 3,583,888 + +0.5 3,583,889 - -0.7 3,583,889 - +0.6 3,583,889 - +0.4 3,583,889 - +0.3 3,583,889 - +0.2 3,583,889 - +0.1 3,583,889 - +0.0 3,583,889 - -0.9 3,583,889 - -0.7 3,583,931 + +0.9 3,583,931 + +0.1
Or see this region's nucleotide sequence