Experiment: Carbon source Sucrose 10 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_14345 and AO356_14350 are separated by 16 nucleotides AO356_14350 and AO356_14355 are separated by 130 nucleotides
AO356_14345: AO356_14345 - molecular chaperone SurA, at 3,261,041 to 3,262,321
_14345
AO356_14350: AO356_14350 - LPS biosynthesis protein, at 3,262,338 to 3,265,136
_14350
AO356_14355: AO356_14355 - aminoglycoside phosphotransferase, at 3,265,267 to 3,266,292
_14355
Position (kb)
3262
3263
3264
3265
3266 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3262.399 kb on - strand at 3262.399 kb on - strand at 3262.399 kb on - strand at 3262.399 kb on - strand at 3265.222 kb on - strand at 3265.222 kb on - strand at 3265.222 kb on - strand at 3265.222 kb on - strand at 3265.283 kb on + strand at 3265.283 kb on + strand at 3265.283 kb on + strand at 3265.283 kb on + strand at 3265.283 kb on + strand at 3265.283 kb on + strand at 3265.283 kb on + strand at 3265.284 kb on - strand at 3265.284 kb on - strand at 3265.284 kb on - strand at 3265.284 kb on - strand at 3265.284 kb on - strand at 3265.284 kb on - strand at 3265.284 kb on - strand at 3265.408 kb on + strand, within AO356_14355 at 3265.409 kb on - strand, within AO356_14355 at 3265.446 kb on - strand, within AO356_14355 at 3265.446 kb on - strand, within AO356_14355 at 3265.492 kb on - strand, within AO356_14355 at 3265.594 kb on + strand, within AO356_14355 at 3265.594 kb on + strand, within AO356_14355 at 3265.595 kb on - strand, within AO356_14355 at 3265.631 kb on + strand, within AO356_14355 at 3265.699 kb on + strand, within AO356_14355 at 3265.699 kb on + strand, within AO356_14355 at 3265.699 kb on + strand, within AO356_14355 at 3265.699 kb on + strand, within AO356_14355 at 3265.699 kb on + strand, within AO356_14355 at 3265.699 kb on + strand, within AO356_14355 at 3265.700 kb on - strand, within AO356_14355 at 3265.700 kb on - strand, within AO356_14355 at 3265.700 kb on - strand, within AO356_14355 at 3265.700 kb on - strand, within AO356_14355 at 3265.700 kb on - strand, within AO356_14355 at 3265.748 kb on - strand, within AO356_14355 at 3265.748 kb on - strand, within AO356_14355 at 3265.748 kb on - strand, within AO356_14355 at 3265.748 kb on - strand, within AO356_14355 at 3265.748 kb on - strand, within AO356_14355 at 3265.867 kb on + strand, within AO356_14355 at 3265.867 kb on + strand, within AO356_14355 at 3265.867 kb on + strand, within AO356_14355 at 3265.867 kb on + strand, within AO356_14355 at 3265.867 kb on + strand, within AO356_14355 at 3265.868 kb on - strand, within AO356_14355 at 3265.868 kb on - strand, within AO356_14355 at 3265.868 kb on - strand, within AO356_14355 at 3265.896 kb on - strand, within AO356_14355 at 3265.933 kb on + strand, within AO356_14355 at 3265.933 kb on + strand, within AO356_14355 at 3265.934 kb on - strand, within AO356_14355 at 3265.948 kb on + strand, within AO356_14355 at 3265.948 kb on + strand, within AO356_14355 at 3265.948 kb on + strand, within AO356_14355 at 3265.948 kb on + strand, within AO356_14355 at 3265.949 kb on - strand, within AO356_14355 at 3265.949 kb on - strand, within AO356_14355 at 3265.949 kb on - strand, within AO356_14355 at 3265.949 kb on - strand, within AO356_14355 at 3265.949 kb on - strand, within AO356_14355 at 3265.949 kb on - strand, within AO356_14355 at 3265.949 kb on - strand, within AO356_14355
Per-strain Table
Position Strand Gene LocusTag Fraction Carbon source Sucrose 10 mM remove 3,262,399 - +0.3 3,262,399 - -0.9 3,262,399 - +0.3 3,262,399 - +1.9 3,265,222 - -0.9 3,265,222 - -0.9 3,265,222 - +0.3 3,265,222 - +0.6 3,265,283 + -0.1 3,265,283 + -1.7 3,265,283 + -0.4 3,265,283 + +0.7 3,265,283 + -0.1 3,265,283 + -0.4 3,265,283 + -0.7 3,265,284 - -0.1 3,265,284 - -0.6 3,265,284 - -0.7 3,265,284 - -0.2 3,265,284 - -1.8 3,265,284 - +0.4 3,265,284 - -1.7 3,265,408 + AO356_14355 0.14 -0.1 3,265,409 - AO356_14355 0.14 -0.6 3,265,446 - AO356_14355 0.17 +0.6 3,265,446 - AO356_14355 0.17 -1.3 3,265,492 - AO356_14355 0.22 -2.1 3,265,594 + AO356_14355 0.32 -1.7 3,265,594 + AO356_14355 0.32 -0.7 3,265,595 - AO356_14355 0.32 -2.6 3,265,631 + AO356_14355 0.35 -0.1 3,265,699 + AO356_14355 0.42 -3.0 3,265,699 + AO356_14355 0.42 +1.9 3,265,699 + AO356_14355 0.42 -0.2 3,265,699 + AO356_14355 0.42 -0.1 3,265,699 + AO356_14355 0.42 -1.3 3,265,699 + AO356_14355 0.42 -0.1 3,265,700 - AO356_14355 0.42 +0.7 3,265,700 - AO356_14355 0.42 +0.3 3,265,700 - AO356_14355 0.42 -0.1 3,265,700 - AO356_14355 0.42 -2.6 3,265,700 - AO356_14355 0.42 -2.3 3,265,748 - AO356_14355 0.47 -0.6 3,265,748 - AO356_14355 0.47 -0.8 3,265,748 - AO356_14355 0.47 +0.2 3,265,748 - AO356_14355 0.47 -1.0 3,265,748 - AO356_14355 0.47 -0.1 3,265,867 + AO356_14355 0.58 -0.8 3,265,867 + AO356_14355 0.58 -1.2 3,265,867 + AO356_14355 0.58 -0.3 3,265,867 + AO356_14355 0.58 +0.3 3,265,867 + AO356_14355 0.58 -1.1 3,265,868 - AO356_14355 0.59 -0.5 3,265,868 - AO356_14355 0.59 -0.6 3,265,868 - AO356_14355 0.59 -2.2 3,265,896 - AO356_14355 0.61 -0.6 3,265,933 + AO356_14355 0.65 +0.1 3,265,933 + AO356_14355 0.65 -1.5 3,265,934 - AO356_14355 0.65 -0.1 3,265,948 + AO356_14355 0.66 +0.2 3,265,948 + AO356_14355 0.66 -0.8 3,265,948 + AO356_14355 0.66 -0.4 3,265,948 + AO356_14355 0.66 -3.0 3,265,949 - AO356_14355 0.66 -1.0 3,265,949 - AO356_14355 0.66 -0.6 3,265,949 - AO356_14355 0.66 +1.3 3,265,949 - AO356_14355 0.66 -1.5 3,265,949 - AO356_14355 0.66 +0.2 3,265,949 - AO356_14355 0.66 -1.7 3,265,949 - AO356_14355 0.66 -1.5
Or see this region's nucleotide sequence