Experiment: Carbon source Sucrose 10 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_03855 and AO356_03860 are separated by 169 nucleotides AO356_03860 and AO356_03865 are separated by 11 nucleotides AO356_03865 and AO356_03870 are separated by 131 nucleotides
AO356_03855: AO356_03855 - AAA family ATPase, at 853,407 to 854,882
_03855
AO356_03860: AO356_03860 - flagellar assembly protein FliT, at 855,052 to 855,348
_03860
AO356_03865: AO356_03865 - flagellar export chaperone FliS, at 855,360 to 855,755
_03865
AO356_03870: AO356_03870 - flagellar hook protein FliD, at 855,887 to 857,317
_03870
Position (kb) 855
856 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 854.163 kb on - strand, within AO356_03855 at 854.317 kb on + strand, within AO356_03855 at 854.317 kb on + strand, within AO356_03855 at 854.318 kb on - strand, within AO356_03855 at 854.318 kb on - strand, within AO356_03855 at 854.318 kb on - strand, within AO356_03855 at 854.318 kb on - strand, within AO356_03855 at 854.500 kb on + strand, within AO356_03855 at 854.500 kb on + strand, within AO356_03855 at 854.501 kb on - strand, within AO356_03855 at 854.501 kb on - strand, within AO356_03855 at 854.501 kb on - strand, within AO356_03855 at 854.501 kb on - strand, within AO356_03855 at 854.501 kb on - strand, within AO356_03855 at 854.501 kb on - strand, within AO356_03855 at 854.551 kb on + strand, within AO356_03855 at 854.673 kb on + strand, within AO356_03855 at 854.674 kb on - strand, within AO356_03855 at 854.703 kb on + strand, within AO356_03855 at 854.703 kb on + strand, within AO356_03855 at 854.703 kb on + strand, within AO356_03855 at 854.703 kb on + strand, within AO356_03855 at 854.704 kb on - strand, within AO356_03855 at 854.704 kb on - strand, within AO356_03855 at 854.704 kb on - strand, within AO356_03855 at 854.704 kb on - strand, within AO356_03855 at 854.704 kb on - strand, within AO356_03855 at 854.787 kb on + strand at 854.788 kb on - strand at 854.843 kb on + strand at 854.887 kb on + strand at 854.887 kb on + strand at 854.887 kb on + strand at 854.887 kb on + strand at 854.888 kb on - strand at 854.888 kb on - strand at 854.899 kb on + strand at 854.900 kb on - strand at 854.933 kb on + strand at 854.934 kb on - strand at 854.934 kb on - strand at 854.934 kb on - strand at 854.961 kb on - strand at 854.961 kb on - strand at 854.969 kb on + strand at 854.970 kb on - strand at 854.977 kb on + strand at 854.986 kb on - strand at 854.988 kb on + strand at 854.988 kb on + strand at 854.988 kb on + strand at 854.989 kb on - strand at 854.989 kb on - strand at 854.989 kb on - strand at 854.989 kb on - strand at 854.989 kb on - strand at 854.993 kb on - strand at 854.993 kb on - strand at 854.993 kb on - strand at 854.993 kb on - strand at 855.042 kb on + strand at 855.043 kb on - strand at 855.068 kb on + strand at 855.069 kb on - strand at 855.069 kb on - strand at 855.361 kb on + strand at 855.362 kb on - strand at 855.487 kb on + strand, within AO356_03865 at 855.487 kb on + strand, within AO356_03865 at 855.487 kb on + strand, within AO356_03865 at 855.487 kb on + strand, within AO356_03865 at 855.487 kb on + strand, within AO356_03865 at 855.487 kb on + strand, within AO356_03865 at 855.487 kb on + strand, within AO356_03865 at 855.487 kb on + strand, within AO356_03865 at 855.487 kb on + strand, within AO356_03865 at 855.488 kb on - strand, within AO356_03865 at 855.488 kb on - strand, within AO356_03865 at 855.488 kb on - strand, within AO356_03865 at 855.488 kb on - strand, within AO356_03865 at 855.488 kb on - strand, within AO356_03865 at 855.493 kb on + strand, within AO356_03865 at 855.494 kb on - strand, within AO356_03865 at 855.605 kb on + strand, within AO356_03865 at 855.605 kb on + strand, within AO356_03865 at 855.641 kb on + strand, within AO356_03865 at 855.641 kb on + strand, within AO356_03865 at 855.642 kb on - strand, within AO356_03865 at 855.672 kb on + strand, within AO356_03865 at 855.672 kb on + strand, within AO356_03865 at 855.672 kb on + strand, within AO356_03865 at 855.672 kb on + strand, within AO356_03865 at 855.672 kb on + strand, within AO356_03865 at 855.672 kb on + strand, within AO356_03865 at 855.672 kb on + strand, within AO356_03865 at 855.673 kb on - strand, within AO356_03865 at 855.673 kb on - strand, within AO356_03865 at 855.673 kb on - strand, within AO356_03865 at 855.673 kb on - strand, within AO356_03865 at 855.673 kb on - strand, within AO356_03865 at 855.673 kb on - strand, within AO356_03865 at 855.673 kb on - strand, within AO356_03865 at 855.673 kb on - strand, within AO356_03865 at 855.673 kb on - strand, within AO356_03865 at 855.742 kb on - strand at 855.760 kb on + strand at 855.760 kb on + strand at 855.760 kb on + strand at 855.760 kb on + strand at 855.760 kb on + strand at 855.760 kb on + strand at 855.761 kb on - strand at 855.761 kb on - strand at 855.761 kb on - strand at 855.785 kb on + strand at 855.785 kb on + strand at 855.786 kb on - strand at 855.786 kb on - strand at 855.786 kb on - strand at 855.786 kb on - strand at 855.786 kb on - strand at 855.786 kb on - strand at 855.787 kb on + strand at 855.787 kb on + strand at 855.796 kb on + strand at 855.797 kb on - strand at 855.797 kb on - strand at 855.984 kb on + strand at 856.078 kb on + strand, within AO356_03870 at 856.113 kb on + strand, within AO356_03870 at 856.114 kb on - strand, within AO356_03870 at 856.114 kb on - strand, within AO356_03870 at 856.114 kb on - strand, within AO356_03870 at 856.262 kb on - strand, within AO356_03870 at 856.262 kb on - strand, within AO356_03870
Per-strain Table
Position Strand Gene LocusTag Fraction Carbon source Sucrose 10 mM remove 854,163 - AO356_03855 0.51 +1.4 854,317 + AO356_03855 0.62 +1.0 854,317 + AO356_03855 0.62 +1.8 854,318 - AO356_03855 0.62 +1.2 854,318 - AO356_03855 0.62 +0.2 854,318 - AO356_03855 0.62 +1.0 854,318 - AO356_03855 0.62 +0.4 854,500 + AO356_03855 0.74 +1.3 854,500 + AO356_03855 0.74 +0.7 854,501 - AO356_03855 0.74 +1.8 854,501 - AO356_03855 0.74 +0.1 854,501 - AO356_03855 0.74 -0.1 854,501 - AO356_03855 0.74 +0.5 854,501 - AO356_03855 0.74 +0.1 854,501 - AO356_03855 0.74 +1.4 854,551 + AO356_03855 0.78 +0.8 854,673 + AO356_03855 0.86 +1.7 854,674 - AO356_03855 0.86 +1.2 854,703 + AO356_03855 0.88 +0.8 854,703 + AO356_03855 0.88 -0.6 854,703 + AO356_03855 0.88 +0.8 854,703 + AO356_03855 0.88 +1.5 854,704 - AO356_03855 0.88 -0.4 854,704 - AO356_03855 0.88 +0.1 854,704 - AO356_03855 0.88 +0.5 854,704 - AO356_03855 0.88 -0.1 854,704 - AO356_03855 0.88 +1.3 854,787 + +1.1 854,788 - +1.0 854,843 + +1.2 854,887 + +0.8 854,887 + +0.8 854,887 + +0.5 854,887 + +0.6 854,888 - +1.3 854,888 - +0.4 854,899 + +1.5 854,900 - -0.1 854,933 + +0.6 854,934 - +0.9 854,934 - +0.8 854,934 - +0.5 854,961 - +0.4 854,961 - -0.3 854,969 + +0.8 854,970 - +1.0 854,977 + +0.9 854,986 - -2.6 854,988 + +1.3 854,988 + +0.9 854,988 + -0.9 854,989 - +0.3 854,989 - -0.6 854,989 - -0.8 854,989 - +0.2 854,989 - +0.4 854,993 - -0.0 854,993 - -0.9 854,993 - +0.9 854,993 - +1.0 855,042 + +0.8 855,043 - +0.1 855,068 + +1.2 855,069 - -0.1 855,069 - -0.6 855,361 + +0.4 855,362 - +0.1 855,487 + AO356_03865 0.32 +0.6 855,487 + AO356_03865 0.32 +0.1 855,487 + AO356_03865 0.32 +1.0 855,487 + AO356_03865 0.32 +0.4 855,487 + AO356_03865 0.32 +0.5 855,487 + AO356_03865 0.32 +0.7 855,487 + AO356_03865 0.32 +1.5 855,487 + AO356_03865 0.32 +0.6 855,487 + AO356_03865 0.32 +0.4 855,488 - AO356_03865 0.32 +1.9 855,488 - AO356_03865 0.32 +0.8 855,488 - AO356_03865 0.32 +0.2 855,488 - AO356_03865 0.32 +0.4 855,488 - AO356_03865 0.32 +2.1 855,493 + AO356_03865 0.34 +0.9 855,494 - AO356_03865 0.34 +1.5 855,605 + AO356_03865 0.62 +0.1 855,605 + AO356_03865 0.62 +0.8 855,641 + AO356_03865 0.71 +0.7 855,641 + AO356_03865 0.71 +0.9 855,642 - AO356_03865 0.71 +0.5 855,672 + AO356_03865 0.79 +0.9 855,672 + AO356_03865 0.79 -0.6 855,672 + AO356_03865 0.79 -0.0 855,672 + AO356_03865 0.79 +0.1 855,672 + AO356_03865 0.79 +0.3 855,672 + AO356_03865 0.79 +1.2 855,672 + AO356_03865 0.79 -0.5 855,673 - AO356_03865 0.79 +1.8 855,673 - AO356_03865 0.79 +1.4 855,673 - AO356_03865 0.79 +0.1 855,673 - AO356_03865 0.79 +0.1 855,673 - AO356_03865 0.79 +1.0 855,673 - AO356_03865 0.79 +0.7 855,673 - AO356_03865 0.79 +2.5 855,673 - AO356_03865 0.79 -0.0 855,673 - AO356_03865 0.79 -0.3 855,742 - -1.4 855,760 + +1.2 855,760 + -0.1 855,760 + -0.4 855,760 + -0.1 855,760 + +0.9 855,760 + +0.5 855,761 - +1.3 855,761 - -0.6 855,761 - +1.1 855,785 + +0.3 855,785 + +0.4 855,786 - -0.5 855,786 - +0.1 855,786 - -0.3 855,786 - -3.0 855,786 - -0.2 855,786 - +1.3 855,787 + +0.0 855,787 + -0.3 855,796 + +1.5 855,797 - -0.1 855,797 - +0.3 855,984 + +0.6 856,078 + AO356_03870 0.13 +0.2 856,113 + AO356_03870 0.16 -0.4 856,114 - AO356_03870 0.16 -0.0 856,114 - AO356_03870 0.16 +1.6 856,114 - AO356_03870 0.16 +0.5 856,262 - AO356_03870 0.26 +1.0 856,262 - AO356_03870 0.26 +1.2
Or see this region's nucleotide sequence